Genotype dynamics of Campylobacter jejuni in a broiler flock

We investigated the genotype diversity and dynamics of Campylobacter in a commercial broiler flock during rearing and slaughter. In total, 220 Campylobacter jejuni isolates collected on four sampling occasions during rearing and from routine sampling during slaughter were subtyped by SmaI macrorestriction and pulsed-field gel electrophoresis, PFGE. Eight different SmaI types were found. During rearing, a subsequent addition of genotypes occurred, with two SmaI types found at 2 weeks of age and six types on the day before slaughter. All types that were detected in more than one isolate were also found on all succeeding sampling occasions, including the slaughter sampling. Two new types were found in the slaughter samples. In two-thirds of the individual birds sampled the day before slaughter, more than one SmaI type were found, although there was a clear tendency for dominance of one type in individual birds. Our results show that multiple genotypes of C. jejuni may be present in a commercial broiler flock during rearing and even in gastrointestinal tracts of individual birds. Both recurring environmental exposure and genetic changes within the population may explain the genotype diversity. Although the distribution of genotypes varied between different sampling occasions, we found no indication that any subtype excluded another during the rearing of the broiler flock.     

A note on the fertility and some demographical parameters of Icelandic toelter horses

Mating results of 5649 pairings taking place in the years 1978 and 1979 were analysed. The average fertility rate for 316 stallions was found to be 85.6%. On average, 17.9 mares were mated to each stallion during the breeding season. The overall fertility (conception) rate was estimated to 82.1%, the apparent fertility rate 81.1% and the numerical productivity rate 78.0%. The sex ratio for the newborn foals was found to be 52.5% males vs 47.5% females, which is significantly different from an equal ratio of the two sexes. The generation interval from parent's birth to birth of offspring, L_PO, was estimated to be 9.7 years. The generation intervals for the four different paths were: L_SS=8.6, L_SD=8.7, L_DS=11.4 and L_DD=11.6.     

Segment-based coancestry,additive relationship and genetic variance within and between the Norwegian and the Swedish Fjord horse populations

ABSTRACT

The Fjord horse originates from Norway but forms a global population due to several small populations in foreign countries. There exists no information about the additive relationship and the genetic variance between these subpopulations. By collecting blood samples from Norwegian and Swedish Fjord horses, a sample of 311 Norwegian and 102 Swedish horses gave 485,918 SNPs available for analysis. Their inbreeding coefficients were calculated and compared to the pairwise coancestry and the shared genomic segments. The effective population size was almost similar with the two methods in the Norwegian Fjord horse population (63 and 71), but very different in the Swedish population (269 and 1136) and unprecise due to a much smaller number of observations. The study showed that coancestry from shared genomic segments can be used to estimate additive genetic relationship and genetic variation within and between the global populations of the Fjord horse.     

The role of dietary methionine concentrations on growth,metabolism and N‐retention in cobia (Rachycentron canadum) at elevated water temperatures

This study determined impacts of dietary methionine concentrations at two temperatures on growth, feeding efficiency and N‐metabolites in juvenile cobia. Methionine concentrations of the experimental diets were deficient (M9; 9 g/kg), sufficient (M12; 12 g/kg) and surplus (M16, 16 g/kg). Water temperature was normal (30°C) or elevated (34°C). Twenty cobia in triplicate tanks were fed the experimental diets for 6 weeks. Both methionine and temperature affected cobia's growth and feeding efficiency. Cobia fed M9 performed lower than the fish fed M12 and M16 diets. Additionally, cobia reared at 34°C performed poorer than at 30°C, probably due to lower voluntary feed intake in the fish reared at 34°C. Protein efficiency ratio and protein productive value in cobia fed M9 diet were less than M12 or M16 diets. This was confirmed with the improved retentions of indispensable amino acids (AAs). No interactions between methionine and temperature were observed in growth and protein accretion. At 30°C, CF improved, while HSI and VSI declined upon methionine supplementation levels. Of which an interaction between temperature and methionine was present. Plasma, muscle and liver free AA and N‐metabolites were affected by methionine and temperature. Furthermore, temperature affected cobia's lipid class composition, resulting in increased phospholipids and cholesterol at 34°C.     

Effects of Plant and Soil Factors on Growth of Young Apple and Blackcurrant Plants

Abstract

Shoot growth as affected by plant size at planting, peat application in the planting hole, pruning, drip-irrigation and, for apple, specific apple replant disease (SARD) was investigated in apple (cv. Elstar) and blackcurrant (cvs Ben Lomond and Ben Nevis), using a multifactorial design. In the first year after planting, peat application and drip-irrigation enhanced shoot growth in both species, with a further interactional increase when both treatments were applied. The extension growth of apple, in contrast to blackcurrant, was positively related to plant size, and the strength of the relationship was distinctly improved when growth conditions were good. Pruning had only small effects on total shoot growth, with a trend towards an increase when growth conditions were poor.     

Evaluation of genetic variation among wild rice populations in Cambodia

A total of 448 samples in five natural populations of wild rice (Oryza rufipogon) were collected in Cambodia. They were examined using 12 SSR and two chloroplast markers to evaluate the degree of variation among populations and the genetic structure within populations. In the two annual populations, the number of plants with homozygous alleles at all 12 SSR loci were high (66.3% and 79.5%), suggesting that these plants propagate mainly through self-pollination. In the three perennial populations, no individuals had all homozygous genotypes, but redundant genotypes resulted from clonal propagation were observed. Percentages of the redundant genotypes were highly varied (3.6%, 29.2% and 86.0%). This may be due to the different stable levels of environmental conditions. As for chloroplast genome, most of the wild plants showed the same chloroplast types as most Indica-type cultivars have. However, plants with different chloroplast types were maintained, even in the same population. In tropical Asian countries, many wild rice populations were observed under similar ecological conditions examined in this study. Therefore, the present results concerning population structure will be important to further elucidate genetic features of wild rice, and will also give strong clues to utilize and conserve wild natural genetic resources.     

Measuring density effects on growth and survival of two size classes of juvenile sea urchins (Strongylocentrotus droebachiensis) held in sea‐based holding systems and impacts on holding system design and management

Assessing density in intensive sea urchin culture systems by measuring the percentage coverage of available surface area is an effective means of calculating the available space within a holding system, the proximity of the animals in the system to each other and the probable effects of the stocking density. The results of this study show that density plays a critical role in regard to both somatic growth (increase in test diameter measured in millimetres) as well as mortality of juvenile sea urchins ranging in size from 5 mm to 26 mm test diameter (the size range tested in the current experiments). These effects appear to be greater for smaller urchins. The critical percentage coverage densities are in the order of 50%‐60% coverage for juvenile sea urchins, and the authors advise farmers growing Strongylocentrotus droebachiensis to maintain stocking densities below this point and to reduce the stocking densities as and when stocks reach these critical density points. Percentage cover must be constantly monitored as the results from this study indicate that the growth rates of juvenile urchins can alter percentage coverage rapidly and reductions in density may be required as frequently as every 3‐4 months at the early juvenile stage. Holding system design should take these factors into account and incorporate a method of rapidly reducing stocking densities with minimal stress and handling of sea urchin stocks.     

Coldwater RAS in an Arctic charr farm in Northern Norway

Use of coldwater recirculating aquaculture systems (RAS) are still very rare in Norway, and only two farms are producing Arctic charr. This project took place in one of these commercial Arctic charr farms; Villmarksfisk AS in Bardu, Northern Norway.The farm gets its make-up water from ground water that holds 5 °C year around. Temperature in the rearing water varies between 7.5 °C (“low”) to 12 °C (“high”) through the year. The biological filter in the RAS seems to work stable at both “low” and “high” temperatures, including after incidents when feeding has been stopped for a day and started on top again the day after. Such an extreme change in loading was measured as a 70% increase in TAN concentration, with only minor changes in nitrite levels recorded. The biofilter also kept the nitrite stable and low in spite of diurnal variation in TAN excretion at normal feeding regimes (every day in three periods at day-time).The farming concept is to stock the farm with wild caught juvenile fish for on-growing to market size fish (0.75–1.00 kg). A drop in growth rate during early autumn has been a main concern for the farm. This may reflect a seasonal shift in growth potential, sometimes referred to as “autumn depression”. Interestingly, there is little sign of seasonal changes in the growth of hatchery-produced fish tested in the farm. Sampling of water quality through the seasons in tanks holding fish undergoing such growth depressions indicate that TAN excretion is much higher per kg feed used in the wintertime than in the springtime. This observation corresponds with the lack of weight gain during wintertime despite that the fish is feeding. Thus, feed conversion calculations indicate that feed utilization also varies with season reaching its nadir during this period.Both challenges concerning RAS in cold water and strongly reduced growth in autumn and winter time, have been investigated from 2005 to 2007 in a project financed by the Norwegian research council and the partners in the agricultural framework agreement.     

Infectious salmon anaemia (ISA) epidemiology in Norway

A case-control study is reported of 57 holdings (holdings in which salmon are raised in sea-water) with infectious salmon anaemia (ISA) and 61 holdings without ISA, together with a follow-up study of the control holdings, during 1988–1990. Generally the identified risk factors implied poor biosecurity since passive transmission (proximity to other ISA holdings) and active transmission (management practices which increased exposure to foreign biological material) were found to be major risk factors. The findings indicated that ISA was spread by infected live salmon or infected biological material i.e. animal waste or discharge from normal operations and slaughter. The findings also indicated that decreased host resistance could be important, but these results could be also be explained by a misclassification bias. Moreover, the findings indicate that a prompt eradication policy and improved biosecurity would be important means of controlling ISA.