Validation of a multiplex PCR assay to detect Babesia spp. and Anaplasma marginale in cattle in Uruguay in the absence of a gold standard test

Detection of bovine Babesia spp. and Anaplasma marginale is based on the reading of Giemsa-stained blood or organ smears, which can have low sensitivity. Our aim was to improve the detection of bovine Babesia spp. and A. marginale by validating a multiplex PCR (mPCR). We used 466 samples of blood and/or organs of animals with signs and presumptive autopsy findings of babesiosis or anaplasmosis. The primers in our mPCR amplified the rap-1a gene region of Babesia bovis and B. bigemina, and the msp-5 region of A. marginale. We used a Bayesian model with a non-informative priori distribution for the prevalence estimate and informative priori distribution for estimation of sensitivity and specificity. The sensitivity and specificity for smear detection of Babesia spp. were 68.6% and 99.1%, and for A. marginale 85.6% and 98.8%, respectively. Sensitivity and specificity for mPCR detection for Babesia spp. were 94.2% and 97.1%, and for A. marginale 95.2% and 92.7%, respectively. Our mPCR had good accuracy in detecting Babesia spp. and A. marginale, and would be a reliable test for veterinarians to choose the correct treatment for each agent.     

A comparison of soil- and canopy temperature-based methods for the early detection of water stress in a simulated patch of pasture

This paper evaluates the sensitivity of two different methods of water stress detection in a simulated patch of pasture grown in a greenhouse. The performance of two indices, based respectively on canopy temperature and soil water content values — the latter gauged by means of a time domain reflectometry (TDR) system, was assessed against actual evapotranspiration, measured by a very accurate weighing system. Both methods were able to detect water shortage by the time transpiration was reduced to some 80% of its potential value. The soil-based index, however, relied on the estimate of root water extraction rate, which may not be known. It is concluded that detection of water shortage by means of a canopy temperature-based stress index is to be preferred to measuring soil water deficits by time domain reflectometry, despite the accuracy of the TDR-based soil water content estimate.     

氮改性褐煤的特性及其在退化土壤造林中的应用研究

通过研究褐煤在氧化氨解反应后特性的变化及其在退化土壤造林中的应用效果,旨在探索褐煤高效利用的有效途径.结果表明:氧化氨解工艺能有效地提高褐煤的阳离子交换量、腐殖酸总量和富里酸含量,降低胡敏素含量.反应生成的氮改性褐煤,全氮含量为5.8%,且呈不同形态(铵态、酰胺态和紧密有机态氮态)的分布,能在土壤中保存较长的时间.半干旱退化土壤中的应用试验表明,在土壤中掺入氮改性褐煤(每株137 g或274 g)可使樟子松林分造林成活率提高20%～25%,而施用相应含氮量的尿素对林木成活率几乎没有作用.随着立地条件的改善和植被的恢复,施用氮改性褐煤林分的土壤碳汇、土壤微生物总量以及脱氢酶、脲酶、β-葡糖苷酶、碱性磷酸酶等的活性都有明显的提高,证实了氮改性褐煤可以作为一类生态和环保的土壤改良剂.     

Sorghum Pasta and Noodles: Technological and Nutritional Aspects

Plant Foods for Human Nutrition - Sorghum is a major cereal crop with various agronomic advantages, contains health-promoting compounds and is gluten-free. There is a growing tendency to use...     

Characterisation of and changes in the atmospheric deposition situation in German forest ecosystems using multivariate statistics

Based on the results of the atmospheric deposition classification of the year 1989, a methodical approach should be introduced, which—based on the modelled total deposition rates—enables us to characterise the input situation of forest monitoring plots and to delimit load areas in Germany. In 1989, the deposition situation in nearly 1,800 forest monitoring sites (BZE/extensive Soil Condition Inventory) in Germany could be explained by four factors (or three, excluding sea salt impact) with the help of a factor analysis. The factor values were grouped into six deposition types with typical compounds and regional patterns. The classified input rates of the soil inventory plots adequately represent the stress situation and deposition changes in Germany. The application of the statistical approach on the level of Brandenburg clarifies the special local input situation. Due to the special combination of deposed elements, the sources of emissions can be characterised as well. When the soil inventory is repeated, a project planned for 2006, this approach can be used in order to determine homogenous areas for stratified data evaluation.     

Concept and feasibility study for the integrated evaluation of environmental monitoring data in forests

In the 1970s unexpected forest damages, called “new type of forest damage” or “forest decline”, were observed in Germany and other European countries. The Federal Republic of Germany and the German Federal States implemented a forest monitoring system in the early 1980s, in order to monitor and assess the forest condition. Due to the growing public awareness of possible adverse effects of air pollution on forests, in 1985 the ICP Forests was launched under the convention on long-range transboundary air pollution (CLRTAP) of the United Nations Economic Commission for Europe (UN-ECE). The German experience in forest monitoring was a base for the implementation of the European monitoring system. In 2001 the interdisciplinary case study “concept and feasibility study for the integrated evaluation of environmental monitoring data in forests”, funded by the German Federal Ministry of Education and Research, concentrated on in-depths evaluations of the German data of forest monitoring. The objectives of the study were: (a) a reliable assessment of the vitality and functioning of forest ecosystems, (b) the identification and quantification of factors influencing forest vitality, and (c) the clarification of cause-effect-relationships leading to leaf/needle loss. For these purposes additional data from external sources were acquired: climate and deposition, for selected level I plots tree growth data, as well as data on groundwater quality. The results show that in particular time series analysis (crown condition, tree growth, and tree ring analysis), in combination with climate and deposition are valuable and informative, as well as integrated evaluation of soil, tree nutrition and crown condition data. Methods to combine information from the extensive and the intensive monitoring, and to transfer process information to the large scale should be elaborated in future.

Die Einführung der Arsenverstäubung vom Flugzeug aus in die Praxis der Forstschädlingsbekämpfung

Ohne Zusammenfassung     

Fluorescence of Extracts from Argentine Hake (Merluccius hubbsi) Muscle and Its Correlation with Quality Indices During Chilled Storage

Argentine hake (Merluccius hubbsi) was stored chilled for 8 days. The evolution of fluorescence of the aqueous and organic extracts of muscle during storage at 4°C was studied and correlated with common damage indices; pH, total volatile basic nitrogen, free fatty acids, and the fluorescence intensity of the aqueous phase showed a good correlation with storage time. The excitation-emission matrices of the aqueous extracts were also obtained. A fluorescence landscape that could be attributed to tryptophan decreased with storage time, meanwhile a peak (around 340 and 400 nm for excitation and emission wavelengths, respectively) is developed during chilled storage.