Involvement of mammalian Mus81 in genome integrity and tumor suppression

Mus81-Eme1 endonuclease has been implicated in the rescue of stalled replication forks and the resolution of meiotic recombination intermediates in yeast. We used gene targeting to study the physiological requirements of Mus81 in mammals. Mus81-/- mice are viable and fertile, which indicates that mammalian Mus81 is not essential for recombination processes associated with meiosis. Mus81-deficient mice and cells were hypersensitive to the DNA cross-linking agent mitomycin C but not to gamma-irradiation. Remarkably, both homozygous Mus81-/- and heterozygous Mus81+/- mice exhibited a similar susceptibility to spontaneous chromosomal damage and a profound and equivalent predisposition to lymphomas and other cancers. These studies demonstrate a critical role for the proper biallelic expression of the mammalian Mus81 in the maintenance of genomic integrity and tumor suppression.     

QTL Analysis for Grain Iron and Zinc Concentrations in Two O. nivara Derived Backcross Populations

Identification of quantitative trait loci (QTLs) for grain mineral elements can assist in faster and more precise development of micronutrient dense rice varieties through marker-assisted breeding. In the present study, QTLs were mapped for Fe and Zn concentrations in two BC₂F₃ mapping populations derived from the crosses of O. sativa cv Swarna with two different accessions of O. nivara. In all, 10 and 8 QTLs were identified for grain Fe and Zn concentrations in population 1, and 7 and 5 QTLs were identified in population 2, respectively. Eighty percent of the QTLs detected in both populations were derived from O. nivara. Five QTLs for Fe and three QTLs for Zn explained more than 15% phenotypic variance either in interval or composite interval mapping. The locations of O. nivara derived QTLs such as qFe2.1, qFe3.1, qFe8.2 and qZn12.1 were consistently identified in both the populations. Epistatic interaction was observed only between RM106 and RM6 on chromosome 2 and between RM22 and RM7 on chromosome 3 for Fe concentration in population 1. Sixteen candidate genes for metal homeostasis were found to co-locate with 10 QTLs for Fe and Zn concentrations in both the populations. Most of the Fe and Zn QTLs were found to co-locate with QTLs for grain yield and grain quality traits. Some of the major effect QTLs identified can be used to improve rice grain Fe and Zn concentrations.     

The effect of plant growth regulators and natural supplements on in vitro propagation of Pogostemon cablin Benth.

The effect of plant growth regulators and natural supplements on the morphogenetic response of Pogostemon cablin Benth. was investigated. Murashige and Skoog (MS) media supplemented with 0.5 mg L^?1 benzyl-6-adenine and 0.5 mg L^?1 kinetin was effective in inducing multiple shoots (63.20 ± 0.15) with an average shoot length of 5.27 ± 0.15 cm and biomass of 5.20 ± 0.10 g shoot^?1. Among the natural supplements, 10% coconut water supplemented to MS media showed a better response in all the morphological parameters studied. The use of 10% tomato extract, 20% banana extract, 10% carrot extract, and 10% papaya extract in MS medium have efficiently increased multiple shoots, shoot length, and fresh weight of the shoots. The natural supplements also effectively increased the chlorophyll content, total protein, and total carbohydrate content in the plant. The frequency of rooting (93%) was highest when shoots were implanted on 1/2 strength MS media with 100 mg L^?1 activated charcoal. The in vitro rooted plants were successfully acclimatized and established in soil. Also, RAPD analysis showed no variation suggesting true-to-type nature of the micropropagated plants. Hence, this protocol can effectively reduce the cost of in vitro multiplication of plants.     

Characterization of phosphate solubilizing fluorescent pseudomonads from the rhizosphere of Aloe vera (L.)

Soil phosphorous (P) deficiency is a major constraint to plant production which is overcome by adding inorganic-phosphate as chemical fertilizers. Fluorescent pseudomonads are the diverse group of bacteria able to mobilize sparingly soluble phosphate form. Total three hundred seven fluorescent Pseudomonas isolates were obtained from the Aloe barbadensis (Miller) rhizosphere. These Pseudomonas strains were further evaluated in vitro for their ability to solubilize phosphate and to produce indole acetic acid (IAA), hydrogen cyanide (HCN), siderophore and 1-aminocyclopropane 1- carboxylate (ACC) deaminase. Fifty three (36.8%) isolates produced IAA and 52 (36.1%) isolates produced siderophores whereas 36 (25.0%) and 31 (21.5%) isolates produced HCN and ACC deaminase, respectively. A positive correlation existed between siderophore and ACC deaminase producers. Cluster analysis showed rhizosphere as the major factor influencing the ecological distribution and physiological characterization of phosphate solubilizing bacteria (PSB). Based on partial 16S rRNA gene sequencing PSB were identified as Pseudomonas putida, Pseudomonas sp. and Pseudomonas plecoglossicida with highest phosphate solubilization ability. In conclusion, these phosphate solubilizing fluorescent pseudomonads would help in understanding their role in phosphorus solubilization and identification of potent phosphorus solubilizers from the rhizosphere of commercially grown A. barbadensis.     

Pharmaceutical importance and synthetic strategies for imidazolidine-2-thione and imidazole-2-thione derivatives

Imidazole heterocycles containing oxygen or sulfur heteroatoms are of considerable pharmaceutical interest. Many synthetic strategies for imidazolidine-2-thione and imidazole-2-thione derivatives were developed in the past years. They have been well documented by a steadily increasing number of publications and patents. Substituted imidazolidine-2-thiones and imidazole-2-thiones display remarkable biological activities. For instance, imidazole-2-thione has been reported to exhibit antimicrobial, antifungal, antithyroid, antioxidant, cardiotonic, antihypertensive, Dopamine beta-Hydroxylase (DBH) inhibitory and anti-HIV properties. Imidazolidine-2-thione derivatives have been reported to exhibit antimicrobial activity, anti-HIV activity, antifungal activity and so forth. The main purpose of this review is to present a survey of the literature on the different methods of synthesis and reactions involving imidazolidine-2-thione and imidazole-2-thione during the last few decades. This article summarizes an efficient, microwave-assisted method for the liquid-phase combinatorial synthesis of 3,5-disubstituted-thiohydantoin, also reported previously. Synthesis of metal complexes of imidazolidine-2-thione and its derivatives were reported as antimicrobial agents also discussed in the article. Some of the chiral imidazolidine-2-thione N-and C-nucleoside were reported as precursors for the synthesis of azidonucleosides and fluoronucleosides known for their anti-AIDS activity. Metal complexes of heterocyclic thione ligands were reported to possess antifungal activity. Imidazolidine-2-thione and imidazole-2-thione derivatives have found applications in diverse therapeutic areas. Imidazolidine-2-thiones are also used as a chiral auxiliary and ligand for asymmetric catalysis.     

Soil moisture levels affect mycorrhization during early stages of development of agroforestry plants

Plants respond differentially to different arbuscular mycorrhizal fungi (AMF) as well as to the different soil moisture levels. Based on this background, the present study was carried out to investigate the effects of different levels of soil moisture and AMF inoculations on mycorrhization and growth of important agroforestry plants, viz., Phaseolus mungo, Triticum aestivum, Eucalyptus tereticornis, and Albizia procera. The experiments consisted of main treatment, i.e., three levels of soil moisture [field capacity (FC?=?16 %), half-field capacity (FC/2?=?8 %) and double-field capacity (2×FC?=?32 %)] and four subtreatments (mycorrhizal inoculations), viz., Acaulospora scrobiculata, Glomus cerebriforme, Glomus intraradices, and un-inoculated (control). AMF inoculations significantly (P?<?0.05) increased growth and P uptake, in all tested plant species. In P. mungo, maximum AMF efficiency was observed at FC while in other plants, AMF were equally effective at FC/2 and 2×FC. Different inoculants were effective at different moisture levels. Furthermore, mycorrhization was the highest at FC. AMF inoculations were more important than soil moisture (explaining 33–97 % variation in growth) in P. mungo, T. aestivum, and A. procera (forward selection method), whereas soil moisture was more important for growth of E. tereticornis. Thus, it may be stated that depending upon soil moisture, inoculation of plants with suitable AMF consortium can be beneficial.     

Status and consolidated list of threatened medicinal plants of India

A wide array of medicinal plants in India, primarily used by locals for health care, have found wide acceptance and adoption globally (either directly or processed) due to distinct advantages of good results, low or no side-effects and ease of access to general public. Indigenous and traditional systems of medicine in practice since historical times have shown potential (direct or indirect as immune-boosters) against many dreaded ailments including the recent global pandemic of COVID-19. With prediction of sixth mass extinction, there is worldwide concern as majority of these plants, collected from natural stands, are also facing threat of extinction. Since 1990s concerted efforts have been directed towards assessment of threat status, the basic requirement for prioritizing conservation activity to various species of plants and animals. In literature there is staggered information regarding list of threatened plants, including medicinal plants of India, compiled at either state level or national or international level. Analysis of these publications led to collation of a consolidated list of 84 species and the same is presented here. A brief account of conservation efforts in India at national level and supportive policy framework is also included. This compilation is aimed to serve as a comprehensive reference especially for beginners, researchers, conservationists, foresters, pharmaceutical professionals as well as policy makers.

     

Conservation of Zingiber germplasm through in vitro rhizome formation

The effects of various concentrations of maleic hydrazide (MH; 2, 4, 6, 8 mg/l) and three light treatments (16-h, 24-h, 0-h) on in vitro rhizome formation and conservation of ginger (Zingiber officinale Rosc. cv. Rio de Janeiro) were studied. In vitro rhizome formation occurred in all the above treatments. Addition of MH (2–8 mg/l) to the control medium (CM) comprising Murashige and Skoog's (1962) salts, 9% sucrose, 0.8% agar-agar, 0.1 mg/l α-naphthaleneacetic acid (NAA), 1 mg/l N⁶-benzyladenine (BA), did not show any significant positive effects on rhizome formation as well as survival of cultures. A significant effect of light treatments was observed on survival of cultures but not on rhizome formation. More than 50% cultures survived up to 14 months on CM under 16-h and 24-h light conditions as compared to 20% cultures on same medium incubated under dark. A total of 33 genotypes of cultivated and wild species of Zingiber were subsequently tested for conservation through in vitro rhizome formation on CM under 16-h light condition. All genotypes produced rhizomes of varying size with numbers ranging from 3 to 15 per culture and were conserved for at least 12 months; some genotypes could be conserved even up to 16–20 months. Viability of rhizomes was determined by in vitro regeneration of shoots upon subculture and their subsequent establishment in soil. Following the protocol described in the present paper, some 160 genotypes of cultivated and wild species of Zingiber, collected from different geographical regions of India, are being conserved at In Vitro Genebank of National Bureau of Plant Genetic Resources, New Delhi.     

Phosphorus threshold for arbuscular mycorrhizal colonization of crops and tree seedlings

The study was conducted to investigate the effect of phosphorus (P) concentrations (0, 5, 10, 20, 50, and 100 μg g⁻¹) on growth and arbuscular mycorrhizal (AM) colonization of two crops (a rainy season crop, Phaseolus mungo Roxb. var. PU-35 and a winter crop, Triticum aestivum L. var. WH-147) and seedlings of two multipurpose tree species (Eucalyptus tereticornis Sm. [Clone C-7, ITC, Bhadrachalam] and Albizia procera Benth.). Plant growth parameters (shoot length, dry weight) and P uptake increased significantly after inoculations with AM fungi (Acaulospora scrobiculata Trappe, Glomus cerebriforme McGee, and Glomus intraradices Schenck and Smith) in P. mungo, T. aestivum, E. tereticornis, and A. procera. Best results were obtained with G. cerebriforme in P. mungo and A. procera, and A. scrobiculata in T. aestivum, and G. intraradices in E. tereticornis. Results on effect of P application on mycorrhizal dependency (MD) of studied crop and tree species showed that decrease in MD with increase in P concentrations in non-nitrogen-fixing species (T. aestivum and E. tereticornis) was higher than in nitrogen-fixing species (P. mungo and A. procera). Threshold P concentrations for maximum benefits from the AM symbiosis in above-mentioned plant species varied from 5 to 20 μg g⁻¹ and corresponding peaks of arbuscules, vesicles, sporocarp formation, colonization index, and spore count per 100 g sand were noticed. Thus, the results showed that the recorded plant growth peaks were due to AM colonization of crops and tree rhizosphere. Inoculations with AMF were more important than P application (explaining 14–78% variation in plant growth) for P. mungo, T. aestivum, and A. procera (forward selection method), whereas P application was more important for growth in E. tereticornis. Therefore, inoculating plants with a suitable AM inoculant could result in a benefit comparable to high P input and lead to a significant saving of inorganic P fertilizer.