Molecular characterization of A2 and D strains of Soybean mosaic virus, which caused a recent virus outbreak in soybean cultivar Sachiyutaka in Chugoku and Shikoku regions of Japan

Coat protein sequences of two isolates in strain A₂ and five isolates in strain D of Soybean mosaic virus (SMV), which caused a recent mosaic outbreak in soybeans (cv. Sachiyutaka) in Chugoku and Shikoku in Japan, were compared to published data on 15 other Asian-origin isolates. Sequence comparison and cluster analysis showed that SMV isolates of strain A₂ from these districts were closely related, as were those of strain D, but strains A₂ and D were not. Thus, the two strains may have different origins and be carried through seed transmission.     

Background level of indium and gallium in soil with special reference to the pollution of the soils from zinc and lead smelters

The mean and range of indium content in unpolluted soils (Humic Andosols, Eutric Fluvisols, and Mollic Gleysols) was found to be 0.037 (0.016–0.078) μg/g dry wt. In soils polluted by common heavy metals, elevated values of indium up to 1.92 μg/g dry wt were observed together with an increase of cadmium, zinc, and lead. In contrast to indium, gallium content in polluted soils was nearly the same as that in unpolluted soils throughout the profiles. The mean and range of gallium content in all unpolluted and polluted samples was 14.2 (12.8–16.3) μg/g dry wt. The indium and gallium contents in 4 Canadian reference soils were also analyzed.     

Tank culture of yellowfin tuna, Thunnus albacares: developing a spawning population for research purposes

A land-based culture facility for research on yellowfin tuna, Thunnus albacares, was developed at the Achotines Laboratory in the Republic of Panama. Six concrete tanks, and seawater and life support systems were built to maintain a yellowfin broodstock. On average, 50% of the yellowfin caught survived capture and handling, and approximately 30% became broodstock in Tank 1 (17 m diameter, 6 m depth) or Tank 2 (8.5 m diameter, 3 m depth). Each fish was tagged with a microchip implant tag, then weighed, measured, and injected with oxytetracycline (OTC) prior to stocking. Daily rations of primarily market squid, Loligo opalescens, and Pacific thread herring, Opisthonema spp., were regulated based on the feeding activity and energy requirements of the fish. Feeding activity of the broodstock decreased when the water temperatures decreased, and the fish ate decreasing daily rations and increasing calories with increasing size. Spawning occurred in both tanks within 6–8 months of capture. Spawning first occurred in Tank 1 when 24 females ranged in size from 6 to 16 kg and 65 to 93 cm fork length (FL). Spawning was intermittent during the first 2 months and occurred near daily thereafter. Tank size appeared to affect survival rates, the types of mortalities that occurred, and the growth of the fish. Survival rates after 1 year in captivity were higher, and the fish were larger, on average, in Tank 1 than in Tank 2. Most of the mortalities in Tank 1 were the result of wall strikes, which occurred more frequently after the fish reached their highest density of 0.64 kg m⁻³ and sizes greater than 96 cm FL and 19 kg. Non-linear growth models were fitted to the initial stocking sizes and final sizes of fish that died or were removed from Tank 1 during 1996–1999. Estimated growth rates in length (11–48 cm year⁻¹) for fish between 51 and 150 cm FL decreased with increasing length. Estimated growth rates in weight ranged from 9 to 19 kg year⁻¹ for fish less than 19 kg and 20–23 kg year⁻¹ for fish greater than 19 kg. The results of this work demonstrate that the stable environment of a land-based culture facility may be the preferred system for long-term maintenance of a yellowfin broodstock.     

Compressive and tensile properties of a butt-jointed lamination model

A study was undertaken to evaluate the effect of glue application and placement of butt-joints on the compressive and tensile properties in a butt-jointed lamination. The aim was to provide background information for producing butt-jointed, glued, laminated timber. Three butt-jointed lamination models were prepared from spruce-pine-fir (S-P-F) dimension lumber with glued and nonglued butt joints, with different placements of the butt joints in the models. The axial stiffness and strength properties were assessed using both compressive and tensile tests. The results of the study indicated that for the compressive lamination model the application of glue at the butt joint gave more stiffness than the nonglued butt joint. Neither glue application nor placement of the joint had a statistically significant effect on the compressive strength. There were no significant differences between the glued and nonglued butt joint for either tensile strength or stiffness.     

Permuted tRNA genes expressed via a circular RNA intermediate in Cyanidioschyzon merolae

A computational analysis of the nuclear genome of a red alga, Cyanidioschyzon merolae, identified 11 transfer RNA (tRNA) genes in which the 3' half of the tRNA lies upstream of the 5' half in the genome. We verified that these genes are expressed and produce mature tRNAs that are aminoacylated. Analysis of tRNA-processing intermediates for these genes indicates an unusual processing pathway in which the termini of the tRNA precursor are ligated, resulting in formation of a characteristic circular RNA intermediate that is then processed at the acceptor stem to generate the correct termini.     

Rapid HPLC Method for Determination of 12 Isoflavone Components in Soybean Seeds

It is important to determine the isoflavone components by high-performance liquid chromatography(HPLC)for the molecular assistant selection of isoflavone in soybean.Based on the standard samples of 12 isoflavone components,the isoflavone components were analyzed using the determination of absorbance peaks method by HPLC.The results showed that there were different maximum ultraviolet(UV)absorbance for the aglycones of daidzein,glycitein,and genistein,which were at 250,257,and 260 nm,respectively.A linear gradient elution of acetonitrile(13-30%)containing 0.1% acetic acid as a mobile phase was applied on a YMC-C18 column at 35℃.The 12 isoflavone components were determined using the UV detector by HPLC.We concluded that this is a rapid and precise method which adapted to determine the large numbers of samples with microanalysis.     

Growth Characteristics of Tea Plants and Tea Fields in Japan

In 12th century, the Buddhist priest Eisai brought tea ( Camellia sinensis L.) seeds to Japan from China and now tea plants are cultivated all over Japan except in the Hokkaido and Tohoku districts. The quality (reflected in the price) of Japanese green tea is affected by the nitrogen content. Consequently in tea fields, for last three decades large amounts of fertilizer have been applied to produce high quality tea. As a result, problems such as acidification of soil have been caused. It is also known that the growth of tea plants is stimulated by the addition of aluminum (Al) under acidic conditions. In this keynote address, some problems caused by excess applications of fertilizer in tea fields and the growth characteristics of tea plants related to Al are presented.     

Comparison of bacterial endotoxin lipopolysaccharide concentrations in the blood,ovarian follicular fluid and uterine fluid: a clinical case of bovine metritis

We investigated the concentration of the bacterial endotoxin lipopolysaccharide (LPS) in the blood, ovarian follicular fluid and uterine fluid of a clinical case of bovine metritis. A 2-year-old lactating Holstein cow exhibited continuous fever >39.5°C for more than 2 weeks after normal calving. The cow produced a fetid, watery, red-brown uterine discharge from the vagina and was diagnosed with metritis. The LPS concentrations in plasma and uterine fluid were 0.94 and 6.34 endotoxin units (EU)/ml, respectively. One of seven follicles showed an extremely high level of LPS (12.40 EU/ml) compared to the other follicles (0.62–0.97 EU/ml). These results might suggest the presence of high concentration of LPS in follicles in cows with postpartum metritis.     

Iron uptake in a bicarbonate-resistant cell line of tobacco

Abstract

In alkaline soils, plant growth is impaired mainly by high pH and high concentration of bicarbonates. The bicarbonate concentration increases the pH value, and causes deficiency of iron. A bicarbonate-resistant cell line (BR line) of tobacco (Nicotiana tabacum L. cv. Burley21) was selected by adding excess bicarbonate ions (20 mmol L^?1) to the culture medium. The pH of the medium was buffered 8.0 to 8.3. Under these conditions, about 80% of iron in the medium became insoluble. However, under such conditions, the BR line grew well. In this report, we examined some characteristics of the growth and iron uptake in the BR line under iron-deficient (i.e. high pH or no-iron) condition. At pH 5.8, the Fe³⁺ reduction activity was not significantly different between the non-selected line and the BR line. At pH 8.0, however, the Fe³⁺ reduction activity of the BR line was higher than that of the non-selected line. In no-iron condition, the growth of the non-selected line was markedly reduced after 2 weeks, while the BR line was not affected. The content of malic acid in both lines increased with the medium pH, and the content in the BR line was higher than that in the non-selected line. The BR line was able to adapt to the conditions, which restricted iron uptake, such as high bicarbonate concentration, high pH, and low iron conditions. The high ability of Fe³⁺ reduction was maintained at even high pH conditions. Further, the BR line may be able to improve the utilization of iron in the cells.