Fecal carriage of multi-drug resistant and extended spectrum β-lactamases producing E. coli in household pigeons,Bangladesh

Antibiotic resistance and ESBL constitute a risk to human and animal health. Birds residing close to humans could mirror the spectrum of human associated antibiotic resistance. Household pigeons were screened in Bangladesh to shed light on human associated, as well as, environmental antibiotic resistance. Escherichia coli from pigeons (n = 150) were tested against 11 antibiotics. 89% E. coli isolates were resistant to one or more critically important human antibiotics like ampicillin, cefadroxil, mecillinam, ciprofloxacin, gentamicin and tigecycline. No carbapenamase-producers were detected and the lower ESBL prevalence (5%) in pigeons. ESBL-producing E. coli isolates had bla_CTX-M-15 genes. Pigeons shared some bacterial clones and had bird associated sequence types like E. coli ST1408. Fecal carriage of bacteria resistance of critically important human antibiotics, together with examples of shared genotypes among pigeons, indicate the human-birds and bird to bird transmissions are important in the epidemiology of antibiotic resistance.     

Effects of variation in seed sources and pre-sowing treatments on seed germination of Tamarindus indica: a multi-purpose tree species in Bangladesh

We investigated the morphology and germination of Tamarindus indica seeds in order to discover the effects of variation in seed sources and pre-sowing treatments on germination. The experiment was carried out in the nursery of the Forestry and Wood Technology Discipline, Khulna University, Bangladesh. Seeds were collected from different but healthy trees from various locations in Bangladesh and subjected to four pre-sowing treatments, i.e., control, immersion in cold water (4°C for 24 h), immersion in hot water (80°C for 10 min) and scarification with sand paper. Seed germination was carried out in poly-bags with a mixture of topsoil and cow dung in the ratio of 3:1. The average length of the fresh seeds was 1.35±0.26 cm, their width 1.07 ±0.20 cm and thickness 0.69±0.11 cm. The results revealed that pre-sowing treatments affected the germination process of seeds, which significantly increased the germination percentage with the cold water (81.67%) and scarification with sand paper (82.33%) treatments, compared with those in the control (58.33%) and hot water treatment (59.00%). In all treatments germination started on average within 5 to 7 days after the start of the treatments and were completed from 13 to 19 days later. The greatest success in germination (82.33%) was found in scarification with sand paper, followed with 81.67% in the cold water treatment. The results of analyses of variance (ANOVA) showed significant differences (p<0.05) in germination closing dates, seed germination periods and germination percentages among the treatments but no significant difference among seed sources. However, the effect of the interaction between seed source variation and pre-treatment differed significantly in seed germination closing dates and germination percentages. We recommend cold water treatment (submersion of seed at a temperature of 4°C for a 24-h period) for seed germination of T. indica in rural Bangladesh.     

Quantification and Understanding of Above and Belowground Biomass in Medium Saline Zone of the Sundarbans,Bangladesh: The Relationships with Forest Attributes

ABSTRACT

The relationship between stand attributes and biomass accumulation pattern in a mangrove forest has been intensively studied in this study. We assessed above (AGM) and belowground mass (BGM) and examined the relationship between forest attributes and aboveground mass in the Sundarbans, Bangladesh. The study was conducted with 18 plots having total area of 1.08 ha. The mean AGM and BGM of the study sites were 234.08 and 132.85 Mg ha^?1 respectively. H. fomes contributed the highest amount (82.9% of total AGM and 80.53% of total BGM) of above (193.56 Mg ha^?1) and belowground mass (107.09 Mg ha^?1) at the study site. Our study revealed structural attributes (tree diameter, height, and basal area) positively correlated with AGM. In contrast, species richness and species diversity negatively correlated with AGM. Our study indicated that lack of positive relationship between species diversity and AGM which may be attributable to high AGM of the dominant species (H. fomes) and may have a considerable consequence in AGM of the study area. Thus, maintaining large trees (DBH and height) rather than species diversity in the Sundarbans mangrove forest might be an effective approach for increasing aboveground mass.     

平欧杂种榛主栽品种需冷量、需热量研究

[目的]揭示平欧杂种榛主栽品种的需冷量和需热量,更好地指导生产做好区域化栽培。[方法]本研究以16个平欧杂种榛主栽品种的1年生枝条为试材,以野生平榛1年生枝条为对照,通过水培观察的方法,首次对平欧杂种榛的雌、雄花序和叶芽进行需冷量和需热量研究。[结果]表明:平欧杂种榛不同器官的需冷量由低到高依次为雄花序336 1 176 h、雌花序504 1 344 h、叶芽672 1 512 h;需热量由低到高依次为雄花序687.0 998.5GDH℃、雌花序998.5 3 496.1 GDH℃、叶芽2 546.5 4 180.3 GDH℃;不同品种、器官在刚满足最低蓄冷要求时需热量最高,随着蓄冷时间的延长,需热量逐渐减少。[结论]首次报道了平欧杂种榛主栽品种雄、雌花序和叶芽的需冷量和需热量数据,其中,达维、平欧48号等品种花器官需冷量较低,辽榛2号、平欧545号等品种花器官需冷量较高;玉坠、平欧69号等品种花器官需热量较低,辽榛1号、辽榛4号等品种花器官需热量较高,上述研究丰富了榛属植物开花和休眠解除方面的数据,可为平欧杂种榛的引种和栽培提供参考。     

Detection of a chitinase-like protein in the roots of Douglas-fir trees infected with Armillaria ostoyae and Phellinus weirii

Protein was extracted from root bark of 11- and 25-year-old interior Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) trees that were naturally infected with Armillaria ostoyae (Romagnesi) Herink. The proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Root bark tissue adjacent to infected areas had a significantly higher protein concentration than healthy tissue (P < 0.05), whereas the protein concentration of infected tissue was consistently lower (P < 0.05) than that of healthy tissue. The SDS-PAGE profiles of healthy, infected, and adjacent-to-infected root bark tissues revealed significant differences in concentrations of a 29.3-kDa protein. The N-terminal amino acid sequence of the 29.3-kDa protein displayed significant homology (P = 0.013) to a basic endochitinase. Use of a polyclonal antibody raised against the 29.3-kDa putative endochitinase-like protein (ECP) indicated differences in the quantities of ECP in healthy roots compared with roots infected with A. ostoyae in 11- and 25-year-old interior Douglas-fir trees. The antibody was also used to screen for the presence of the 29.3-kDa protein in roots of 24-year-old coastal Douglas-fir (Pseudotsuga menziesii var. menziesii) trees that were artificially inoculated with and colonized by Phellinus weirii (Murr.) Gilbn. The amount of ECP was elevated in root bark of coastal Douglas-fir in response to P. weirii infection, although in lower quantities relative to those found in the A. ostoyae-interior Douglas-fir pathosystem. The sequence homology of the ECP with a basic chitinase, together with its increased synthesis in response to two fungal pathogens, indicate a possible role for this protein in the defense of Douglas-fir against fungal pathogens.     

Optimization of Compatible Mixed Cultures for Liquid State Bioconversion of Municipal Wastewater Sludge

The filamentous fungal strains such as Penicillium corylophilum (P), Aspergillus niger (A), Trichoderma harzianum (T) and Phanerochaete chrysosporium (PC) isolated from its relevant sources (wastewater, sewage sludge and sludge cake) were selected for compatible/incompatible mixed cultures. Six combinations of P. corylophilum and A. niger (P/A); P. corylophilum and P. chrysosporium (P/PC); P. corylophilum and T. harzianum (P/T); A. niger and T. harzianum (A/T); A. niger and P. chrysosporium (A/PC); T. harzianum and P. chrysosporium (T/PC) were used to evaluate their potential performance as compatible/incompatible mixed culture for the treatment of municipal wastewater sludge in a bioconversion process. The results of the present study showed that the combinations of P/A, P/PC and A/PC showed compatible growth and the rest of the combinations (P/T, A/T and T/PC) were incompatible cultures. A maximum production of dry biomass and dry filter cake were recorded in the compatible mixed culture of P. corylophilum and A. niger (P/A). A maximum reduction of COD (90%) and a decreased filtration time of treated sludge was observed in the case of P/A microbial mixed culture. The pH value was also affected by the fungal cultures. Effective results were observed by using microbial mixed culture after four days of treatment compared to other treatments (2 and 6 days).     

Soybean preference for Bradyrhizobium japonicum for nodulation

For examining the probability of increase in the occupation ratio of inoculated rhizobium in nodules, various Rj-soybean cultivars including the Rj ₂ Rj ₃ Rj ₄-lines of soybean were grown in a field of the Kyushu University Farm. Bradyrhizobium japonicum USDA110 that carries uptake hydrogenase (Hup⁺) was used as an inoculum. The relative efficiency of nitrogen fixation generally increased by the inoculation. However, there were no significant differences in the effects among the genotypes of the host plants. The occupation ratio of serogroup USDA110 in the nodules on the taproot of the inoculated plants was in the range of 77–100%, suggesting that the B. japonicum strain USDA110 infected taproots immediately after inoculation. The occupation ratios in the nodules on the lateral roots were 53–67, 40–86, 63–83, and 62–77% in inoculated plants of the non-Rj-, Rj ₂ Rj ₃-, Rj ₄-, and Rj ₂ Rj ₃ Rj ₄-genotypes, respectively, and they decreased in all the genotypes with the progression of growth. At the time of the first sampling, the occupation ratios on the lateral roots of these Rj ₂ Rj ₃ Rj ₄-genotypes showed values intermediate between those of IAC-2 (Rj ₂ Rj ₃) and Hill (Rj ₄) , which were the parent cultivars of the Rj ₂ Rj ₃ Rj ₄-lines, B340, B349, and C242. The reduction in the occupation ratio of the serogroup USDA110 for about 1 month after the first sampling was the lowest (0.13–0.16) in the Rj ₂ Rj ₃ Rj ₄-genotypes, excluding B349, followed by the non-Rj- and Rj ₂ Rj ₃-genotypes and highest (0.52–0.69) in the Rj ₄-genotypes, excluding Hill. Therefore, it was considered that the population of compatible rhizobia with host soybean plants increased in the rhizosphere with the progression of the development and growth. The results showed that with the expansion of the root area of host plants, the occupation ratio of type A rhizobia including the serogroup USDA110 was high. Therefore, the Rj ₂ Rj ₃ Rj ₄-genotypes were superior to other Rj-genotypes in terms of the inoculation effects of nodulation type A rhizobium, B. japonicum USDA110. However, the preference of the Rj ₂ Rj ₃ Rj ₄-genotype for serogroup USDA110 is not sufficient to rule out the competition with the other serogroups in this study. Therefore, the study should be centered on the isolation of more efficient (Hup⁺) and highly compatible rhizobial strains with the Rj ₂ Rj ₃ Rj ₄- genotypes.     

QUARTZ PORPHYRY TREATMENT ALTERS IRRIGATION WATER CHEMISTRY,AFFECTING HYDROPONIC VEGETABLE PRODUCTION

This study focused on using quartz porphyry (QP) as a water treatment to improve hydroponic production of komatsuna (Brassica rapa L. nothovar; Japanese mustard spinach). We compared the chemistries of the control and QP-treated nutrient solutions and found that magnesium (Mg²⁺) and calcium (Ca²⁺) concentrations increased linearly up to day 21 following sowing in both conditions, then declined slightly. The QP treatment reduced sodium (Na⁺) and chloride (Cl^?) concentrations for the whole cultivation period. In both the control and QP-treated solutions, nitrate (NO^? ₃) and sulfate (SO^2? ₄) showed the same trend to a daily increase. In spite of these similarities, however, komatsuna production was better with the QP-treated nutrient solution compared to control. Treatment with QP during cultivation in August–September reduced the harmful effects of Na⁺, chloride (Cl^?), nitrite (NO^? ₂), and SO^2? ₄ by reducing concentrations of these ions, possibly leading to decreased salinity and toxicity effects in the plants. Mineral concentrations during October–November differed from those of August/September, resulting in variation among the different growth parameters for komatsuna.     

Heavy Metal Contamination of Soil and Vegetation in the Vicinity of Industries in Bangladesh

Water, Air, &; Soil Pollution - A study was conducted to investigate the heavy metal contamination of soil and vegetation in the vicinity of industries around Dhaka city in Bangladesh....