Ecotonal changes and altered tree spatial patterns in lower mixed-conifer forests, Grand Canyon National Park, Arizona, U.S.A.

This research analyzes patch development and determines tree spatial patterns along the lower mixed-conifer ecotone on the North Rim of Grand Canyon National Park in Arizona (U.S.A.). Patterns of patch development were interpreted from spatial analyses, based on tree age and size, and past records of disturbance and climate. Five plots in the ecotone between mixed conifer forests and monospecific stands of ponderosa pine (Pinus ponderosa) were studied for patterns of patch development. The methods used include: (1) size-structure analyses, to compare species patch development; (2) dendrochronological dating of tree establishment; (3) tree ring master chronology, to determine periods of suppressed growth, compared to a Palmer Drought Severity Index; and (4) spatial analyses by species composition, size and age, with univariate and bivariate analyses of spatial association and spatial autocorrelation. We found an increased density of shade-tolerant and fire-intolerant species namely clusters of pole-sized white fir, and fewer large ponderosa pine. This revised version was published online in May 2005 with corrections to the Cover Date. This revised version was published online in July 2006 with corrections to the Cover Date.     

Evaluation of non-chemical seed treatment methods for the control of Alternaria dauci and A. radicina on carrot seeds

The current study was initiated to evaluate the efficacy of physical methods (hot water, aerated steam, electron treatment) and agents of natural origin (resistance inducers, plant derived products, micro-organisms) as seed treatments of carrots for control of Alternaria dauci and A. radicina. Control of both Alternaria species by seed treatment with the resistance inducers was generally poor. Results were also not satisfactory with most of the formulated commercial micro-organism preparations. Based on the average of five field trials, one of these, BA 2552 (Pseudomonas chlororaphis), provided a low but significant increase in plant stand. Among the experimental micro-organisms, the best results were obtained with Pseudomonas sp. strain MF 416 and Clonostachys rosea strain IK726. A similar level of efficacy was provided by seed treatment with an emulsion (1%) of thyme oil in water. Good and consistent control was generally achieved with the physical methods aerated steam, hot water and electron treatment. Aerated steam treatment was, apart from the thiram-containing chemical standard, the best single treatment, and its performance may at least partially be due to extensive pre-testing, resulting in dosages optimally adapted to the respective seed lot. In some of the experiments the effect of the hot water treatment, which was tested at a fixed, not specifically adapted dosage, was significantly improved when combined with a Pseudomonas sp. MF 416 or C. rosea IK726 treatment. The results are discussed in relation to the outcome of experiments in which the same seed treatment methods and agents were tested in other seed-borne vegetable pathosystems.     

High HEV presence in four different wild boar populations in East and West Germany

Swine Hepatitis E virus (HEV) can be transmitted from pigs to humans causing hepatitis. A high prevalence of HEV in wild boar populations is reported for several European countries, but actual data for Germany are missing. During the hunting season from October to December 2007 liver, bile and blood samples were collected from wild boars in four different German regions. The samples were tested for HEV RNA by quantitative PCR (qPCR) and anti-HEV IgG antibodies by two different ELISAs and a Line immunoassay. A seroprevalence of 29.9% using ELISA and 26.2% in the Line immunoassay was determined. The seroprevalence rate varied greatly within the analyzed regions. However, qPCR analysis revealed a higher prevalence of 68.2% positive animals with regional differences. Surprisingly, also adult wild sows and wild boars were highly HEV positive by qPCR. Compared to liver and serum samples, bile samples showed a higher rate of positive qPCR results. Sequencing and phylogenetic analysis of a 969 nt fragment within ORF 2 revealed that all isolates clustered within genotype 3 but differed in the subtype depending on the hunting spot. Isolates clustered within genotypes 3i, 3h, 3f and 3e. Within one population HEV isolates were closely related, but social groups of animals in close proximity might be infected with different subtypes. Two full-length genomes of subtypes 3i and 3e from two different geographic regions were generated. The wild boar is discussed as one of the main sources of human autochthonous infections in Germany.     

Mineral‐nitrogen and phosphorus leaching from vegetable gardens in Niamey,Niger

Urban and periurban agriculture (UPA) contributes significantly to meeting increasing food demand of rapidly growing urban populations in West African cities. The often intensive high‐input vegetable production within UPA results in large positive nutrient balances, being presumably linked to strong nutrient leaching which needs quantification. This study aimed at estimating leaching losses of mineral N and P in three representative urban gardens of Niamey, Niger, using ion‐exchange‐resin cartridges installed below the crop rooting zone at 0.6 m soil depth. In 2007, a year with below‐average annual rainfall (425 mm as compared to 542 mm), mean leaching of mineral N amounted to 5.9 and 7.3 kg N ha^–1 for two gardens with > 80% sand fraction and only 2.2 kg N ha^–1 for a garden with 40% silt and clay. Apparent annual P leaching was 0.7 kg P ha^–1 in all three gardens. Additional multiannual studies are necessary to assess the effect of inter‐ and intraannual variation in precipitation on nutrient leaching in intensive UPA vegetable production of semiarid West Africa.     

Pattern-oriented modeling of agent-based complex systems: lessons from ecology

Agent-based complex systems are dynamic networks of many interacting agents; examples include ecosystems, financial markets, and cities. The search for general principles underlying the internal organization of such systems often uses bottom-up simulation models such as cellular automata and agent-based models. No general framework for designing, testing, and analyzing bottom-up models has yet been established, but recent advances in ecological modeling have come together in a general strategy we call pattern-oriented modeling. This strategy provides a unifying framework for decoding the internal organization of agent-based complex systems and may lead toward unifying algorithmic theories of the relation between adaptive behavior and system complexity.     

Theonellamides J and K and 5-cis-Apoa-theopalauamide,Bicyclic Glycopeptides of the Red Sea Sponge Theonella swinhoei

Theonella swinhoei is a fairly common inhabitant of reefs throughout the Indian and Pacific Oceans. Metabolomic analyses of samples of T. swinhoei collected in different depths in the Gulf of Aqaba revealed two chemotypes differing in the profiles of the theonellamides they produce, some of which seem to be unknown. Driven by this finding, we examined a sample of T. swinhoei collected more than 40 years ago in the southern part of the Gulf of Aqaba. Large-scale extract of this sample yielded four theonellamides, the known theopalauamide (4), as the major component, and three new metabolites, theonellamide J (1), 5-cis-Apoa-theopalauamide (2), and theonellamide K (3), as the minor components. The planar structure of these complex cyclic glycopeptides was elucidated by combination of 1D and 2D NMR techniques and HRESIMS. The absolute configuration of the amino acids was established by Marfey’s and advanced Marfey’s methods, and the absolute configuration of its galactose unit using “Tanaka’s method” for monosaccharides. The biological activity of the pure compounds was tested for antibacterial activity and for cytotoxicity to HTC-116 cell line. The compounds presented significant cytotoxicity against the HTC-116 cell line, illuminating the importance of the Apoa subunit for the activity.     

Induced spawning and artificial incubation of Tilapia

Methods for induced spawning and artificial incubation of Tilapia nilotica and T. aurea are described. These methods were required for the production, in aquaria, of F₁ hybrids between the two species. Spawning families were established in long aquaria from which sexually ripe individuals were selected for stripping by their “on heat” display coloration. Injections of pituitary hormones were not required. The fertilized eggs were incubated in a low speed “shaker”. At correct temperatures Tilapia fry may be produced by this artificial process all year round.