Efficiency of amino acid utilization in the growing pig at suboptimal levels of intake: branched-chain amino acids, histidine and phenylalanine + tyrosine

Five balance experiments on growing pigs were carried out to study the marginal efficiency of utilization of isoleucine, leucine, valine, histidine and phenylalanine + tyrosine and to estimate their requirements for maintenance. Purified diets based on casein and crystalline amino acids as the sole source of N contained graded levels of each amino acid, corresponding to protein accretion rates of 0, 33, 66, 99 and 132 g/day, respectively. All other essential amino acids were given in a 30% excess. N retention increased linearly (p < 0.01) as the dietary concentration of the limiting amino acid increased. Based on linear regression equations relating amino acid deposition in body protein to amino acid intake, marginal efficiencies of ileal digestible amino acid utilization were calculated to be isoleucine - 0.81, leucine - 0.81, valine - 0.82, histidine - 1.17 and phenylalanine + tyrosine - 0.67. Extrapolating the regression equations to zero N retention, the daily requirements of amino acids for N equilibrium were estimated to be (mg/kg0.75) isoleucine - 18, leucine - 33, valine - 23, histidine - 14 and phenylalanine + tyrosine - 43.     

DUBA: a deubiquitinase that regulates type I interferon production

Production of type I interferon (IFN-I) is a critical host defense triggered by pattern-recognition receptors (PRRs) of the innate immune system. Deubiquitinating enzyme A (DUBA), an ovarian tumor domain-containing deubiquitinating enzyme, was discovered in a small interfering RNA-based screen as a regulator of IFN-I production. Reduction of DUBA augmented the PRR-induced IFN-I response, whereas ectopic expression of DUBA had the converse effect. DUBA bound tumor necrosis factor receptor-associated factor 3 (TRAF3), an adaptor protein essential for the IFN-I response. TRAF3 is an E3 ubiquitin ligase that preferentially assembled lysine-63-linked polyubiquitin chains. DUBA selectively cleaved the lysine-63-linked polyubiquitin chains on TRAF3, resulting in its dissociation from the downstream signaling complex containing TANK-binding kinase 1. A discrete ubiquitin interaction motif within DUBA was required for efficient deubiquitination of TRAF3 and optimal suppression of IFN-I. Our data identify DUBA as a negative regulator of innate immune responses.     

High yield and nutritional quality of rice for animal feed achieved by continuous irrigation with treated municipal wastewater

Paddy and Water Environment - Two consecutive pilot-scale experiments were conducted to investigate the potential reuse of treated municipal wastewater (TWW) as an irrigation source for cultivating...     

Aboveground biomass increment and stand dynamics in tropical evergreen broadleaved forest

Forest ecosystems can modify the atmospheric CO₂ through biomass accumulation mostly in tree stems with diameter at breast height (DBH) ≥ 10 cm. Aboveground biomass increment (ΔAGB), and changes in stand AGB, no. stems and basal area (BA) were calculated from mortality, recruitment, and growth data of tree stems in tropical evergreen broadleaved forest, Central Highland Vietnam. Data were derived from ten 1-ha permanent plots established in 2004, where all stems with DBH ≥ 10 cm were tagged, identified to species, and measured for DBH in 2004 and 2012. In an 8-year duration, the increment was 53 ± 10 stems ha^–1, 7.8 ± 0.3 m² ha^–1 for BA and 86.0 ± 4.6 Mg ha^–1 for AGB. The stem mortality rate was 0.9% year^–1 and the stem recruitment rate was 2.2% year^–1. Annual ΔAGB was 10.8 Mg ha^–1 year^–1, equaling to 5.4 Mg C ha^–1 year^–1. Of which, tree stems of 35–80 cm DBH classes accounted for 65%. The results indicated that the forest is in stage of carbon sequestration. Any disturbances causing death of 35–80 cm DBH tree stems will much reduce carbon sequestration capacity and it will take a long time for AGB to return to pre-disturbance stage.     

The effect of simulated rat damage on irrigated rice yield and compensation

A field experiment was conducted to investigate the impact of simulated rat damage on grain yield in irrigated lowland rice in An Giang province, in the Mekong Delta of Vietnam. Rat damage was simulated by making a 45° cut at the base of the rice tillers about 3–5 cm above the soil surface. 0% (control), 5%, 10%, 25% and 50% of the tillers were removed at the tillering (25 days after sowing, DAS), panicle initiation (43 DAS), flowering (72 DAS) and ripening (87 DAS) stages. The total number of mature tillers, immature tillers and percent filled grains, the weight of 1000 grains and grain yields were recorded. The rice crop completely compensated by increased tillering and yield for tillers damaged up to 50% at the tillering stage. However, the damage and yield loss were highly variable. The ability of the rice crop to compensate at later stages progressively reduced. The implications for managing rat damage to rice crops are (1) rodent control activities should be applied before 10% of tillers are damaged at the tillering stage, and (2) a well balanced nitrogen supply during the tillering stage could potentially assist the rice plants to better compensate for rat damage.     

Effects of Integrated Shrimp Farming in Vietnam

Despite being a leading shrimp exporter in the world market, shrimp farming in Vietnam is carried out by many small‐scale farmers who face constraints in complying with increasingly stringent food safety and sustainability standards. The best way for such small farmers to circumvent this paradox is to make effective integrations both horizontally and vertically. Using value chain and institutional economics approaches, this study determines the factors that influence the probability of horizontal and vertical integrations between the production and processing stages in the shrimp industry in Vietnam. Analysis results confirm that integrated shrimp aquaculture is much more effective than the traditionally small‐scale‐ and individual‐production mode. In addition, logit estimation results identify the key factors affecting integration, including effectiveness of the legal framework, production scale, infrastructure development, and farmers' skill and awareness. Several policy recommendations proposed to encourage the development of integration in shrimp farming in Vietnam could also be useful for other similar developing countries.     

The practice of leaching boron and soluble salts from fly ash-amended soils

The leachability of B and salts from two fly ash-amended soils was conducted in a column leaching experiment. Fly ash was applied to the surface 3 cm of a Baywood (acid) sand and an Arizo (calcareous) sandy, loam at 5% by weight; the columns were continously leached with Colorado River water at two different pH's. Boron from fly ash was solubilized more readily in the Baywood than in the Arizo soil. Addition of fly ash increased B levels in the leachates from 0.25 to 2.35 μg ml^?1 (Baywood) and 0.93 μg ml^?1 (Arizo). Acidified leaching water had no significant effect on B leaching patterns but resulted in leaching higher soluble salts. Approximately 348 and 161 cm of water for the Arizo and the Baywood soils respectively, would be required to reduce the B concentration below a critical limit for B sensitive crops. It is suggested that crops planted when fly ash is applied for disposal/recycling on land should be both salt and B tolerant.     

Growth,yield and silicon uptake of rice (Oryza sativa) as influenced by dose and timing of silicon application under water-deficit stress

Two experiments were conducted to evaluate the effects of dose and timing of silicon (Si) application on rice under limited water supply. The treatments for the first study included five Si doses (0, 75, 150, 300 and 600 kg Si ha^–1) under three soil moisture conditions (100%, 75% and 50% field capacity). For the second study, the treatments were four Si application timings [100% basal, 50% basal + 50% panicle initiation (PI), 25% basal + 75% PI and 25% basal + 50% PI + 25% heading] at the dose of 300 kg ha^–1 under the same moisture conditions. The highest number of panicle plant^–1 (14.6) and grain yield (13.6 g plant^–1) were obtained with the dose of 300 kg Si ha^–1. Similarly, an increase of 34–45% in grain yield was observed for different Si application timings compared with the control. Shoot dry matter and grain yield had positive linear relationship with shoot Si content. Grain yield and number of spikelet panicle^–1 were higher at the 300 kg Si ha^–1 dose applied as 100% basal, and hence could be a feasible option for RD57 Thai rice variety under water-deficit conditions.