Short-term survival and mortality rates in a retrospective study of colic in 1588 Danish horses

Background

Outcomes of colic treatment are of great interest to clinicians, horse owners and insurers. One commonly used criterion of success is the overall short-term survival rate. This is used as to compare treatments and to measure quality of veterinary care, but may be biased by demographic or social factors such as attitudes towards animal suffering and euthanasia. The aims of this study were to 1) describe and analyse characteristics in horses with signs of colic referred to the University Hospital for Large Animals (UHLA), University of Copenhagen, Denmark over a 10-year period and 2) to compare these rates with those published in other comparable studies.

Results

The overall survival rate for colic horses over the 10-year study period was 68% (confidence intervals (CI): 66–71%; 1087/1588). In the medical group, 1093 horses, short-term survival was 87% (CI: 85–89%). Thirty one % of referred horses were given diagnoses requiring surgical intervention (CI: 29–33%). In this group 32% of the horses were euthanized before surgery (CI: 28–36%; 159/495). Of the surgical cases 27% (CI: 23-31%) were euthanized or died during surgery. Of the horses that recovered from surgery 25% died or were euthanized (CI: 19–32%; 48/189), while 75% survived to discharge (CI: 68–81%).

Conclusions

The short term survival rates of Danish horses with colic were similar or lower to those reported from other countries. Apart from variability of veterinary care, attitudes towards euthanasia vary among the countries, which may bias the outcomes. This study indicates that qualitative interview studies on owners’ attitudes towards animal suffering and euthanasia need to be conducted. Our opinion is that survival rates are not valid as sole indicators of quality of care in colic treatment due to selection bias. If the survival rates are to be compared between hospitals, techniques or surgeons, prospective studies including mutually agreed-on disease severity scores and a predefined set of reasons for euthanasia are needed.     

An oligonucleotide microarray-based assay for identification of phytoplasma 16S ribosomal groups

A method using consensus PCR followed by oligonucleotide microarray hybridization was developed for identification of phytoplasma 16Sr ribosomal groups. The array consisted of 21– to 33-nt-long oligonucleotides which were designed to hybridize to individual 16Sr groups. Two oligonucleotides were designed to detect all phytoplasma groups. The array could efficiently identify samples from 16SrI, 16SrII, 16SrIII, 16SrV, 16SrVI, 16SrVII, 16SrIX, 16SrX and 16SrXII ribosomal groups. This microarray-based test represents a rapid method for detection of phytoplasmas in unknown samples and for identification of most 16Sr groups.     

Genetic investigations on male and female fertility in cattle

More than one million inseminations from Red Danish (RDM), Black and White Danish (SDM) and Danish Jersey (DJ) bulls were analyzed to obtain heritability estimates on non-return rate (NR%). The results ranged from 0.010 ± 0.003 to 0.036 ± 0.009. Three NR% and three methods of calculation are used in the analyses.Investigations on 32,100 first calving intervals (CI) within the same breeds yielded heritability estimates of 0.096±0.014, 0.030±0.011 and 0.031±0.018 for RDM, SDM and DJ, respectively.The phenotypic correlations between the bulls' own (NR%) fertility and that of their daughters' (CI) were ?0.17, ?0.16 and 0.10 for RDM, SDM and DJ, the corresponding genetic correlations being ?0.30, ?0.35 and 0.20.It is suggested that in a possible breeding scheme for fertility, attention should concentrate on the female's side (progeny testing).     

Lactic acid bacteria for mink. Colonization and persistence of Enterococcus faecium Cernelle 68 in the digestive tract of mink.

A method was developed to follow a lactic acid bacterial strain, Enterococcus faecium Cernelle 68, with respect to adhesion, multiplication, colonization, and persistence in the digestive tract of mink. Also the spread of the strain in the cage was examined. When adding 5 x 10(9) c.f.u. of a rifampicin resistant mutant per kg feed, high viable counts were registered throughout the digestive tract, apart from the oesophagus. Counts were increasing in the aboral direction, suggesting some multiplication in the intestine. It was possible to detect the strain in the intestinal tract 4 days after discontinuation of administration. Neither culture nor scanning electron microscopy gave evidence to suggest that E. faecium Cernelle 68 adhered to the mucosa. The spread of the E. faecium strain was observed in the environment. Counts of E. coli, lactobacilli, staphylococci, and clostridia were low, and none of these bacteria were constant findings.     

A quantitative screening method to detect rater-introduced bias in clinical ratings

Background

We suggest a ‘screening test’ to examine large data files with clinical ratings for the occurrence of rater-introduced bias prior to using the data for quantitative analyses. The test is based on a statistical model in which a well-standardized interval-scale outcome (for example, milk yield) is related to clinical ratings (for example, body condition scores) obtained from multiple contexts (for example, dairy herds).

Findings

84,968 calvings from 279 herds, with subsequent body condition scores performed by 117 veterinarians within the first 21 days postpartum were analyzed with a multilevel random coefficient regression model. The model included an independent variable, where body condition score was centered within veterinarian. This is a so-called comparison effect to describe possible rater-introduced bias in the body condition scores. A highly significant comparison effect was found for second and older parities, indicating occurrence of possible rater-introduced bias in this large multi-herd data file.

Conclusions

A within-group centering technique (the comparison effect) appeared to be useful for discriminating between biased and unbiased clinical scores. In some cases, this test for bias should prevent further analysis of the data and divert the focus of study to the calibration of raters or alternative study designs.     

Physiological Predictors in Calves of Dairy Breeds: Part 1. Genetic Parameters of Basal and Induced Growth Hormone Secretion

Abstract

Genetic variation in plasma growth hormone (GH) concentration before and after GRF (growth hormone releasing factor) stimulation was studied in young bulls (N=284) and heifers (N=212), the progeny of 53 sires of four dairy and dual-purpose breeds (Danish Jersey, Red Dane, Danish Friesian and Danish Red and White). Male and female calves were reared, fed and tested on separate experimental stations; thus sex, station and feeding were completely confounded effects. The animals were tested at about 9 months of age, after a 24 h fast. GH concentration was measured in serial plasma samples collected for 1 h before and 1 h following intravenous administration of 2.0 ug synthetic GRF(1–29)NH₂/kg live weight^>0.75. Prior to statistical analysis, concentrations were log_e-transformed. Response variables were BASELINE (mean GH in -15, -5 and 0 min samples) and PEAK (mean GH in 10, 15 and 20 min samples). A statistical model taking at least three generations of ancestral relationships into account was used to estimate variance and covariance components for traits in male and female calves by use of restricted maximum likelihood methods.

Heritability of BASELINE was low (0.04 ± 0.12) in males but high in females (0.60 ± 0.16). The heritability of PEAK was high in both sexes (males, 0.42 ± 0.16; females, 0.60 ± 0.16). Genetic correlations between the same trait measured in males and females were low for BASELINE (r _g = 0.32±0.55) but high for PEAK (r _g = 0.82±0.15). Within sex, BASELINE and PEAK were both highly genetically correlated (males, r _g=0.62 ± 0.40; females, r _g= 1.00 ± 0.07).

We conclude that growth hormone concentration is a highly heritable trait in juvenile cattle of both sexes, and that GRF stimulation is benificial to the uncovering of genetic differences among animals.     

Metabolic characterization of rumen epithelial tissue from dairy calves fed different starter diets using 1H NMR spectroscopy

The metabolic profile of calf rumen epithelial tissue was for the first time characterized by ¹H NMR spectroscopy of chloroform/methanol extracts. The metabolite profiles comprised a number of amino acids, creatine, taurine, short-chain fatty acids and triglycerides. The effects of two dietary interventions; i) four levels of milk allowance with a concomitant different uptake of starter concentrate, and ii) two diets with varying content of starch and fibre in the concentrate, were elucidated. Partial least square regression analysis revealed that the intensity of NMR signals assigned to leucine, isoleucine and valine (0.90  ppm), propionate (1.06 and 2.18  ppm), lactate (1.32  ppm), butyrate (1.56  ppm), acetate (1.93  ppm), glutamine/glutamate (2.18, 2.35 and 3.75  ppm), creatine (3.04 and 3.94  ppm) and glycine (3.55  ppm) decreased with increasing milk allowance. In addition, the analysis revealed that the main difference between the two diets was the content of propionate in the epithelia tissue extracts. Previous morphological analyses of the same rumen epithelia were not able to detect any significant effects of either milk allowance or dietary starch content. Accordingly, the present study demonstrated that ¹H NMR spectroscopy applied on extracts is a useful tool for metabolite profiling of epithelial tissue and for following the development of epithelia tissue in young calves, and that the technique may be more sensitive to dietary effects than morphological studies.     

Application of pathogen surveys,disease nurseries and varietal resistance characteristics in an IPM approach for the control of wheat yellow rust

The present paper presents the rationale for the use of pathogen surveys, inoculated and non-inoculated disease nurseries and varietal resistance characteristics in an integrated approach to control wheat yellow rust in Denmark. The non-inoculated disease observation plots, which gave valuable information about yellow rust at the year, site and variety level, served as the primary sample source for the pathogen survey revealing pathogen virulence dynamics. This survey was also the main source for isolates of new pathotypes, a prerequisite for the assessment of the resistance characteristics of varieties and breeding lines in inoculated nurseries, and the postulation of race-specific resistance genes. A simple grouping of varieties into four categories with respect to resistance to the current yellow rust population proved robust, and this grouping was used as a determinant in a web-based decision support system for pesticide applications in cereals, Crop Protection On-line (CPO). The interplay between the different research and survey activities in the integrated pest management (IPM) approach demonstrated the need for a coherent and long-term involvement at all stages from plant breeding to the official variety approval system, extension service and research in disease epidemiology and resistance genetics.     

Heat induced formation of free radicals in wheat flour

Oxidative Stability of bread is increasingly being recognized as important for long shelf-life. Formation of free radicals in whole wheat flour and white flour during heating was compared using Electron Spin Resonance spectroscopy in order to identify the primary oxidative events. Heating lead to a higher content of free radicals in wholemeal wheat flour than in white flour, since components in the husk seem to make a major contribution. Two different pathways are suggested for the formation of free radicals in wheat flour. The activation energy for the radical formation in the flours was estimated by Arrhenius plot as 34 kJ mol⁻¹ up to 453 K, and above 473 K higher activation energies were observed. The change in activation energies indicates a change in reaction mechanisms for oxidation probably involving species with different mobility, i.e. different molecular weight. The accumulated concentration of free radicals in heated flour increased during one month storage and it is slightly affected by the water activity in the storage container.     

QBOL: a new EU project focusing on DNA barcoding of Quarantine organisms

In 2009 a new three year EU funded project (QBOL) started on DNA barcoding of important plant pests. An international consortium of 20 partners (universities, research institutes, and phytosanitary organizations) from around the world, coordinated by Plant Research International (Wageningen, the Netherlands), will collect DNA barcodes from many plant pathogenic quarantine organisms, store these sequences in a database accessible over the internet, develop a DNA bank and train end-users. All these activities should help National Plant Protection Services in the correct identification and detection of plant pathogenic quarantine organisms.