Conversion of a tropical forest into agroforest alters the fine root-related carbon flux to the soil

Large areas of remaining tropical forests are affected by anthropogenic disturbances of various intensities. These disturbances alter the structure of the forest ecosystem and consequently its carbon budget. We analysed the role of fine root dynamics in the soil carbon budget of tropical moist forests in South-east Asia along a gradient of increasing disturbance intensity. Fine root production, fine root turnover, and the associated carbon fluxes from the fine root system to the soil were estimated with three different approaches in five stands ranging from an old growth forest with negligible anthropogenic disturbance to a cacao agroforestry system with planted shade trees. Annual fine root production and mortality in three natural forest sites with increasing canopy openness decreased continuously with increasing forest disturbance, with a reduction of more than 45% between the undisturbed forest and the forest with large timber extraction. Cacao agroforestry stands had higher fine root production and mortality rates than forest with large timber extraction but less than undisturbed forest. The amount of carbon annually transferred to the soil carbon pool through fine root mortality was highest in the undisturbed forest and generally decreased with increasing forest use intensity. However, root-related C flux was also relatively high in the plantation with planted shading trees. In contrast, the relative importance of C transfer from root death in the total above- and below-ground C input to the soil increased with increasing forest use intensity and was even similar to the C input via leaf litter fall in the more intensively managed agroforest. We conclude that moderate to heavy disturbance in South-east Asian tropical moist forests has a profound impact on fine root turnover and the related carbon transfer to the soil.     

Predicting the Phytoextraction Duration to Remediate Heavy Metal Contaminated Soils

The applicability of phytoextraction to remediate soils contaminated with heavy metals (HMs) depends on, amongst others, the duration before remediation is completed. The impact of changes in the HM content in soil occurring during remediation on plant uptake has to be considered in order to obtain a reliable estimate of the phytoextraction duration. To simulate the decrease in the HM content in soil and to assess the resulting decrease in the uptake of HMs by plants, contaminated soil was mixed with uncontaminated, but otherwise similar soil. Uptake of Cd, Pb, and Zn by the indicator plant Lupinus hartwegii and the Zn hyperaccumulator Thlaspi caerulescens (La Calamine ecotype) was a log-linear function of the in-situ measured HM soil solution concentrations. Over a wide range in dissolved Cd and Zn concentrations, uptake of these HMs by T. caerulescens was (much) greater than by L. hartwegii. Experimentally derived regression models describing the relationships between soil, soil solution, and plant were implemented in a HM mass balance model used to obtain estimates of the phytoextraction duration. For our target soils, estimates of the Cd phytoextraction duration using L. hartwegii or T. caerulescens increased significantly by more than 100 or 50 years when experimental soil—soil solution—plant relationships were used instead of the assumption of constant plant uptake of Cd. The two approaches gave similar results for phytoextraction of Zn by T. caerulescens.     

Surface proteins of Breda virus

The serotypes 1 and 2 of Breda virus from feces of experimentally infected gnotobiotic calves were studied with respect to their sedimentation and density properties in sucrose gradients and their structural polypeptides; Berne virus, the proposed prototype of the new family Toroviridae, was included for comparison. After Breda-1 virus had been stored at 4 C for a prolonged period, it showed a heterogeneous sedimentation behavior (480 to 520 Svedberg units [S]) and density (1.18 to 1.21 g/ml) indicative of its poor state of preservation. In contrast, freshly prepared Breda-2 virus sedimented at 350 S and showed a buoyant density of 1.18 g/ml; these values compare well with those of Berne virus (400 S and 1.16 g/ml, respectively). Efficient purification of the Breda viruses could be achieved by a 2-step method, involving pelleting by ultracentrifugation followed by isokinetic and isopyknic sucrose gradient centrifugation. Radioiodinated purified virus showed polypeptides with apparent molecular weights of 105,000, 85,000 37,000, and 20,000; another labeled protein of 65,000 D is of doubtful virus specificity. Mouse immune serum raised against Breda-2 virus recognized the polypeptides of the homologous virus and the 2 highest molecular weight proteins of Breda 1 virus in radioimmune precipitation. The same serum inhibited hemagglutination of the heterologous serotype to a low, but significant, degree and efficiently neutralized the infectivity of Berne virus. These observations are taken as indications that the 105,000- and 85,000-D polypeptides represent surface structures of torovirions, probably peplomeric proteins.     

Evaluation of the Salmonella surveillance program in Belgian pig farms

Since July 2007, Belgium has implemented a national surveillance and control program for Salmonella in pigs. Pig farms are designated as Salmonella high risk farms based on serological profiles and are obliged to subsequently take part in a Salmonella specific action plan (SSAP). The SSAP was evaluated and potential risk factors for the persistence of Salmonella on the farm were investigated. First, the Kaplan-Meier method was used in order to study the period during which a farm maintains a Salmonella high risk status. Farms recovered more slowly from their high risk status before the SSAP was implemented compared to after the program was implemented (p<0.001). However, results showed that 29% of the farms were withdrawn from the program possibly only because of sampling error. The program should thus be adapted to accommodate for this. Secondly, the influence of several risk factors (type of farm, season of entrance into the SSAP, size of farm and farm density of the municipality) on the time to withdrawal from the high risk status was evaluated using univariable methods and a Cox multiple regression model for survival data. A statistically significant association was identified between the type of farm and the time to withdrawal from the high risk status. At any point in time after the onset of the SSAP, withdrawals from the high risk status occurred at a 39% and 28% higher rate in mixed (p=0.01) and fattening farms (p=0.05), respectively, compared to closed farms. The risk attributed to closed pig farms is related to the presence of sows in this particular type of structure, which underlines the importance of implementing control measures in this category of animals.     

The effects of starter microbiota and the early life feeding of medium chain triglycerides on the gastric transcriptome profile of 2-or 3-week-old cesarean delivered piglets

Background: The stomach is an underestimated key interface between the ingesta and the digestive system, affecting the digestion and playing an important role in several endocrine functions. The quality of starter microbiota and the early life feeding of medium chain triglycerides may affect porcine gastric maturation. Two trials(T1, T2) were carried out on 12 and 24 cesarean-delivered piglets(birth, d0), divided over two microbiota treatments, but slaughtered and sampled at two or three weeks of age, respectively. All piglets were fed orally: sow serum(T1) or pasteurized sow colostrum(T2) on d0; simple starter microbiota(Lactobacillus amylovorus, Clostridium glycolicum and Parabacteroides spp.)(d1-d3); complex microbiota inoculum(sow diluted feces, CA) or a placebo(simple association, SA)(d3-d4) and milk replacer ad libitum(d0-d4). The The T1 piglets and half of the T2 piglets were then fed a moist diet(CTRL); the remaining half of the T2 piglets were fed the CTRL diet fortified with medium chain triglycerides and 7% coconut oil(MCT). Total m RNA from the oxyntic mucosa was analyzed using Affymetrix?Porcine Gene array strips. Exploratory functional analysis of the resulting values was carried out using Gene Set Enrichment Analysis.Results: Complex microbiota upregulated 11 gene sets in piglets of each age group vs. SA. Of these sets, 6 were upregulated at both ages, including the set of gene markers of oxyntic mucosa. In comparison with the piglets receiving SA, the CA enriched the genes in the sets related to interferon response when the CTRL diet was given while the same sets were impoverished by CA with the MCT diet.Conclusions: Early colonization with a complex starter microbiota promoted the functional maturation of the oxyntic mucosa in an age-dependent manner. The dietary fatty acid source may have affected the recruitment and the maturation of the immune cells, particularly when the piglets were early associated with a simplified starter microbiota.     

Evaluation of Patients with Community‐Acquired Pneumonia Caused by Zoonotic Pathogens in an Area with a High Density of Animal Farms

Intensive animal farming could potentially lead to outbreaks of infectious diseases. Clinicians are at the forefront of detecting unusual diseases, but the lack of specificity of zoonotic disease symptoms makes this a challenging task. We evaluated patients with community‐acquired pneumonia (CAP) with known and unknown aetiology in an area with a high livestock density and a potential association with animal farms in the proximity. Between 2008 and 2009, a period coinciding with a large Q fever outbreak in the Netherlands, patients with CAP were tested for the presence of possible respiratory pathogens. The presence and number of farm animals within 1 km of the patients' home address were assessed using geographic information system (GIS) and were compared between cases and age‐matched control subjects. Of 408 patients with CAP, pathogens were detected in 275 (67.4%) patients. The presence of sheep and the number of goats were associated with CAP caused by Coxiella burnetii in a multiple logistic regression model (P < 0.05). CAP with unknown aetiology was not associated with the presence of animal farms (P > 0.10). The use of GIS in combination with aetiology of CAP could be potentially used to target diagnostics and to identify outbreaks of rare zoonotic disease.     

The T wave in the V10 precordial electrocardiographic lead is negative in healthy Chihuahua dogs

Objectives

The T wave polarity in the V10 precordial electrocardiographic (ECG) lead in Chihuahuas is described as positive in the veterinary literature. The aim of this study was to investigate the polarity of the T wave in the V10 precordial ECG lead in clinically healthy Chihuahuas. Our null hypothesis was that healthy Chihuahuas have a negative T wave in V10.

Animals, materials and methods

In this prospective study, 67 healthy breeder-owned Chihuahuas were used. A physical examination, 10-lead ECG and an echocardiogram were performed on each dog.

Results

No cardio-respiratory abnormalities were revealed in any of the otherwise healthy dogs. Three out of 67 ECGs were of insufficient quality because of baseline artifacts due to movement of the animal. Two other ECGs showed a nearly iso-electric T wave in the V10 lead. The remaining 62 ECGs showed negative T waves in the V10 lead. Right ventricular hypertrophy was excluded with echocardiography in all dogs.

Conclusion

In contrast to previous reports, we found that healthy Chihuahuas have negative T wave in the V10 precordial ECG lead.