Increased abundance of patatins,lipoxygenase and miraculins in a thaxtomin A-habituated potato Russet Burbank somaclone with enhanced resistance to common scab

Potato common scab caused by the actinobacterium Streptomyces scabiei is characterized by the formation of corky lesions on tubers that reduce their marketability. Management of common scab is very complex and often ineffective under various environmental conditions. Using potato varieties that are more resistant to common scab remains one of the most efficient strategies to control this disease. However, very little is known about the factors associated with resistance to common scab. Somaclone RB9 regenerated from thaxtomin A-habituated potato Russet Burbank calli produced tubers more resistant to common scab than the original variety. Comparison of the RB9 tuber proteome with that of Russet Burbank using label-free quantitative proteomic analysis revealed changes in the accumulation of defence-related proteins from the patatin and lipoxygenase (LOX) families, which are involved in the metabolism of lipids, and of two miraculins of the Kunitz-type protease inhibitors family. The implication of LOX during common scab infection was studied using synchronized minitubers developed from leaf-bud cuttings. S. scabiei infection stimulated the accumulation of LOX in both Russet Burbank and RB9 minitubers, but this accumulation was intensified in RB9 minitubers. Infection also increased LOX activity in Russet Burbank and RB9 minitubers. However, LOX activity measured in noninfected RB9 minitubers was similar to that of infected Russet Burbank minitubers, indicating endogenous activation of LOX activity in RB9 minitubers. We discuss how increased LOX abundance and activity in the somaclone RB9 may contribute to improving tuber defence against common scab.     

Health status and risk factors associated with failure of passive transfer of immunity in newborn beef calves in Québec

Risk factors associated with failure of passive transfer of immunity (FPT) were evaluated among newborn beef calves in Québec. Physical examination was performed on calves born of a normal calving and blood samples were collected for determination of health status and measurement of serum concentration of immunoglobulin (Ig) G1. Of 225 calves, from 45 herds, 19% showed FPT (serum IgG1 concentration < 10.0 g/L). Calves born in a stanchion-stall were more likely to show FPT (OR: 10.2). Calves bottle-fed colostrum were less at risk for FPT (OR: 0.06). Calf gender, month of birth, dam parity, and dam body condition score were not associated with FPT. No association was detected between FPT and health status. Special care should be given to calves born from cows in a stanchion-stall to ensure adequate colostrum intake. Failure of passive transfer of immunity should be considered with other risk factors when investigating morbidity.     

Isolated canine and murine intestinal cells exhibit a different pattern of fuel utilization for oxidative metabolism

The amount and type of dietary fiber influences the end-products of fermentation and thus fuel availability to intestinal tissue. Metabolic fuel usage was studied in intestinal cells isolated from dogs consuming a commercial diet or from rats consuming either a commercial rat diet or dog diet to examine preferential fuel usage, the effect of diet, and species differences. Production of 14CO2 was measured by incubating cells in media containing either D-[U-14C]glucose, [1-14C]n-butyrate, L-[U-14C]glutamine, or [1-14C]propionate with or without competing substrates. The presence of a mixture of 5 mM each of glucose, butyrate, propionate, and acetate and 1 mM glutamine in the media decreased CO2 production from glucose, glutamine, and propionate by canine enterocytes (P < 0.05) and from glutamine and propionate by canine colonocytes (P < 0.05). The presence of glutamine in the media decreased glucose oxidation by murine enterocytes, regardless of the diet. Similarly, glutamine decreased glucose oxidation by murine colonocytes (P < 0.05), but only when the rats had consumed the rat diet. Regardless of diet, murine colonocytes oxidized more butyrate (P < 0.01) than did enterocytes, and murine enterocytes tended (P < 0.07) to oxidize more glucose than did colonocytes. The proportion of propionate in colonic contents was higher in dogs than in rats (P < 0.02), and the proportion of butyrate tended to be higher in contents from rats than in those from dogs (P < 0.08). Colonic and cecal wet weights were decreased (P < 0.05) when rats were fed the commercial dog diet. Preferred utilization of substrates by isolated canine enterocytes and colonocytes differed from that of murine intestinal cells. These differences were only partially overcome by feeding the same diet to each species.     

Ecosystem services from coffee agroforestry in Central America: estimation using the CAF2021 model

The goal of sustainable coffee production requires multiple functions from agroforestry systems. Many are difficult to quantify and data are lacking, hampering the choice of shade tree species and agronomic management. Process-based modelling may help quantify ecosystem services and disservices. We introduce and apply coffee agroforestry model CAF2021 (https://doi.org/10.5281/zenodo.5862195). The model allows for complex systems with up to three shade tree species. It simulates coffee yield, timber and fruit production by shade trees, soil loss in erosion, C-sequestration, N-fixation, -emission and -leaching. To calibrate the model, we used multivariate data from 32 different treatments applied in two long-term coffee agroforestry experiments in Costa Rica and Nicaragua. Without any further calibration, the model was then applied to agroforestry systems on 89 farms in Costa Rica and 79 in Guatemala where yields had been reported previously in farmer interviews. Despite wide variation in environmental and agronomic conditions, the model explained 36% of yield variation in Costa Rica but only 15% in Guatemala. Model analysis quantified trade-offs between yield and other ecosystem services as a function of fertilisation and shading.

     

Correlating volatile compounds, sensory attributes, and quality parameters in stored fresh-cut cantaloupe

Changes in post-cutting volatiles, quality, and sensory attributes during fresh-cut storage (4 degrees C) of cantaloupe (Cucumis melo L. var. Reticulatus, Naudin, cv. 'Sol Real') harvested at four distinct maturities (1/4-, 1/2-, 3/4-, and full-slip) were investigated after 0, 2, 5, 7, 9, 12, and 14 days in a 2-year study. Increased fruity and sweet taste attributes were negatively correlated with percent acetates, aromatic acetates, and total aromatic compounds, and positively correlated with percentage non-acetate esters. Ethyl hexanoate was strongly positively correlated with fruity and sweet taste. Cucurbit, water-like, hardness, cohesiveness, and denseness were positively correlated with percentage acetates, aromatic acetates, and total aromatic compounds, and negatively correlated with percentage non-acetate esters. Several non-acetate esters such as ethyl 2-methyl propanoate, ethyl butanoate, ethyl 2-methyl butanoate, and ethyl hexanoate were negatively (often strongly) correlated with cucurbit. Hardness was positively and strongly correlated with aromatic acetates and all aromatic (benzyl) compounds. In summary, firmer and denser cubes contained more acetates and fewer non-acetate esters. The apparently negative or undesirable attributes cucurbit and water-like were associated with higher acetates and aromatic compounds. Overall, relatively strong (year x maturity x day) correlations among numerous physiological, volatile, and sensory measures were found in this study. Highly significant (stronger) correlations were found in a year x day analysis used to pair maturity means; however, year and interaction effects require prudence when interpreting that data. Nonetheless, both analyses delivered almost identical trends, and strong correlations occurred even though samples were randomized from numerous fruits, per maturity, per juice catcher container, over 2 years. Further interpretation and biochemical explanation are needed to rationalize why mainly only non-acetate esters were highly correlated with desirable sensory and quality parameters.     

Enigmatic hotspot of crayfish diversity at risk: Invasive potential of non‐indigenous crayfish if introduced to New Guinea

1. The large island of New Guinea has a rich indigenous astacofauna represented by numerous parastacids from the genus Cherax. The western half of the island is part of Indonesian territory.
2. Indonesia is known to be the main exporter of ornamental crayfish globally, and certain New Guinean species are exploited as ornamentals within the international pet trade. Moreover, one non‐indigenous species has been previously recorded being cultured in Java, Indonesia. This species, the North American Procambarus clarkii, is a vector of crayfish plague, the disease that is lethal to most parastacids. This population has already tested positive for the disease.
3. As the transport of non‐indigenous crayfish within the Indonesian territory is not restricted, their introduction to New Guinea can be expected. The Indonesian market was therefore surveyed for ornamental crayfish and their environmental suitability evaluated, as represented by temperature during the drought and rainy seasons in New Guinea.
4. Four North American and one Australian species were found advertised for sale. One of them, P. clarkii, was assessed as the most damaging species, followed by other North American species. A total ban on the culture and transport of the highest risk crayfish species in Indonesia and Papua New Guinea is recommended.

     

Within-season volatile and quality differences in stored fresh-cut cantaloupe cultivars

Cantaloupe cultivar variability from various U.S. regions and growing seasons within a given year was evaluated. As expected, there was often considerable quality and volatile variation among cultivars. Eight of 11 cultivars met the standard U.S. No. 1 requirement for degrees Brix (> or =9), and in most cultivars, degrees Brix declined during fresh-cut storage at 4 degrees C. Hunter L (loss of lightness color value) and a (decline of typical orange hue) colors also generally declined during storage in most cultivars. Volatile ester compounds generally decreased during fresh-cut storage or exhibited a transient increase before declining after 5-7 days of storage. The relative percentage of acetate esters declined during storage in all cultivars, and declines were accompanied by simultaneous non-acetate ester increases. Slight imbalances in compound concentrations may alter the overall perception of desirable, typical "cantaloupe" aroma/flavor during fresh-cut storage. Upsetting the unique aroma balance through storage may negatively affect flavor and the consumer's perception of desirable attributes, even though total volatile levels might not decrease substantially until after 5-7 days in storage. Subtle volatile and quality decreases are likely to be exacerbated with immature-harvested cantaloupe and are likely in out-of-season exports that have likewise been harvested at less mature stages. Altogether, this study indicates the difficulty in procuring cantaloupes of consistent quality from local producers, in a given year, for domestically grown fruit.