Biometrical, biological, biochemical and molecular characteristics of Meloidogyne incognita isolates and related species

Meloidogyne incognita is one of the most polyphagous species of root-knot nematodes occurring in Brazil and worldwide. Eight M. incognita isolates were studied, representing two enzymatic phenotypes (esterase and malate desydrogenase: I1/N1, I2/N1) and four cryptic Meloidogyne sp.1 (S2/N1) isolates, representing one cytological type (3n?=?40–46). Three M. hispanica isolates (Hi3/N1, 2n?=?32–36) and two of an atypical Meloidogyne sp.2 (S2a/N3, 3n?=?40–44) were included in this study for comparison. All isolates were tested with three M. incognita-specific molecular markers. The primer pairs B06F/R, miF/R and incK14F/R amplified three species-specific fragments of 1,200?bp, 955?bp and 399?bp, respectively for M. incognita and Meloidogyne sp.1 isolates. No amplification occurred in the M. hispanica and Meloidogyne sp.2 isolates, except with primers miF/R (1,650?bp). The genetic variability of the Meloidogyne spp. isolates was evaluated, using RAPD and ISSR markers. The phylogenetic analyses revealed two strongly supported monophyletic clades: clade I, consisting of M. hispanica and the atypical Meloidogyne sp.2 isolates, and clade II, clustering together all M. incognita and the Meloidogyne sp.1 isolates. Considering the biometrical, cytological and molecular approaches, it was possible to conclude that the isolates with three enzymatic phenotypes (I1/N1, I2/N1 and S2/N1) presented the characteristics described for M. incognita. Some correlations were detected between the isozymatic phenotypes and the tree topology (S2a/N3, Hi3/N1, I1/N1, S2/N1), but no strict correlation could be observed for the phenotype I2/N1 and one isolate of S2/N1. Morphologically, the Msp.2 isolates differ from M. incognita and M. hispanica by the female stylet features presenting straight cone tip and round pear shaped knobs, posteriorly sloping. The results of this study suggested that the Msp.2 isolates with phenotypes S2aN3 belong to a new or an unidentified species closely related to M. hispanica.     

Ellagic Acid and Polyhydroxylated Urolithins Are Potent Catalytic Inhibitors of Human Topoisomerase II: An in Vitro Study

Ellagic acid (EA), a natural polyphenol abundant in fruits and common in our diet, is under intense investigation for its chemopreventive activity resulting from multiple effects. EA inhibits topoisomerase II, but the effects on the human enzyme of urolithins, its monolactone metabolites, are not known. Therefore, the action of several synthetic urolithins toward topoisomerases II was evaluated, showing that polyhydroxylated urolithins, EA, and EA-related compounds are potent inhibitors of the α and β isoforms of human topoisomerase II at submicromolar concentrations. Competition tests demonstrate a dose-dependent relationship between ATP and the inhibition of the enzyme. Docking experiments show that the active compounds bind the ATP pocket of the human enzyme, thus supporting the hypothesis that EA and polyhydroxylated urolithins act as ATP-competitive inhibitors of human topoisomerase II.     

Strategies for monitoring within-field soybean yield using Sentinel-2 Vis-NIR-SWIR spectral bands and machine learning regression methods

Soybean crop plays an important role in world food production and food security, and agricultural production should be increased accordingly to meet the global food demand. Satellite remote sensing data is considered a promising proxy for monitoring and predicting yield. This research aimed to evaluate strategies for monitoring within-field soybean yield using Sentinel-2 visible, near-infrared and shortwave infrared (Vis/NIR/SWIR) spectral bands and partial least squares regression (PLSR) and support vector regression (SVR) methods. Soybean yield maps (over 500 ha) were recorded by a combine harvester with a yield monitor in 15 fields (3 farms) in Paraná State, southern Brazil. Sentinel-2 images (spectral bands and 8 vegetation indices) across a cropping season were correlated to soybean yield. Information pooled across the cropping season presented better results compared to single images, with best performance of Vis/NIR/SWIR spectral bands under PLSR and SVR. At the grain filling stage, field-, farm- and global-based models were evaluated and presented similar trends compared to leaf-based hyperspectral reflectance collected at the Brazilian National Soybean Research Center. SVR outperformed PLSR, with a strong correlation between observed and predicted yield. For within-field soybean yield mapping, field-based SVR models (developed individually for each field) presented the highest accuracies. The results obtained demonstrate the possibility of developing within-field yield prediction models using Sentinel-2 Vis/NIR/SWIR bands through machine learning methods.

     

Growth and Saxitoxin Production by Cylindrospermopsis raciborskii (Cyanobacteria) Correlate with Water Hardness

The cosmopolitan and increasing distribution of Cylindrospermopsis raciborskii can be attributed to its ecophysiological plasticity and tolerance to changing environmental factors in water bodies. In reservoirs in the semi-arid region of Brazil, the presence and common dominance of C. raciborskii have been described in waters that are considered hard. We investigated the response of a Brazilian C. raciborskii strain to water hardness by evaluating its growth and saxitoxin production. Based on environmental data, a concentration of 5 mM of different carbonate salts was tested. These conditions affected growth either positively (MgCO₃) or negatively (CaCO₃ and Na₂CO₃). As a control for the addition of cations, MgCl₂, CaCl₂ and NaCl were tested at 5 or 10 mM, and MgCl₂ stimulated growth, NaCl slowed but sustained growth, and CaCl₂ inhibited growth. Most of the tested treatments increased the saxitoxin (STX) cell quota after six days of exposure. After 12 days, STX production returned to concentrations similar to that of the control, indicating an adaptation to the altered water conditions. In the short term, cell exposure to most of the tested conditions favored STX production over neoSTX production. These results support the noted plasticity of C. raciborskii and highlight its potential to thrive in hard waters. Additionally, the observed relationship between saxitoxin production and water ion concentrations characteristic of the natural environments can be important for understanding toxin content variation in other harmful algae that produce STX.     

Genetic diversity and changes in phenolic contents and antiradical activity of <Emphasis Type="Italic">Vaccinium myrtillus</Emphasis> berries from its southernmost growing area in Italy

In this study, we evaluated by the RAPD technique the genetic diversity of 42 individual Vaccinium myrtillus L. plant samples, collected from different locations of Tuscan Apennines (Italy), which represent the southernmost growing latitude of this plant. Total polyphenols, total anthocyanins and radical scavenging activity were also determined in two successive harvesting years on bilberry samples obtained from the same individuals characterized by molecular analysis. The RAPD analysis indicated a highly prevalent gamic propagation of bilberry in the investigated area, and, in accordance with genetic findings elsewhere reported for populations of Central and Northern Europe, suggested the presence, from North-to-South Europe, of a clonal-to-gamic genetic gradient of the propagation strategy. In the context of a quite homogeneous panorama of biochemical data, significant variations were occasionally evidenced by comparing closely-located individuals. We tentatively attributed such variations mainly to genetics, due to the very close location of biomes exhibiting different biochemical attributes. However, molecular clustering by RAPD did not show any relationship with biochemical diversity. Strong variations of climatic conditions were probable responsible of the remarkable variability of the investigated biochemical parameters in the two harvesting years.