A potent and broad neutralizing antibody recognizes and penetrates the HIV glycan shield

The HIV envelope (Env) protein gp120 is protected from antibody recognition by a dense glycan shield. However, several of the recently identified PGT broadly neutralizing antibodies appear to interact directly with the HIV glycan coat. Crystal structures of antigen-binding fragments (Fabs) PGT 127 and 128 with Man(9) at 1.65 and 1.29 angstrom resolution, respectively, and glycan binding data delineate a specific high mannose-binding site. Fab PGT 128 complexed with a fully glycosylated gp120 outer domain at 3.25 angstroms reveals that the antibody penetrates the glycan shield and recognizes two conserved glycans as well as a short β-strand segment of the gp120 V3 loop, accounting for its high binding affinity and broad specificity. Furthermore, our data suggest that the high neutralization potency of PGT 127 and 128 immunoglobulin Gs may be mediated by cross-linking Env trimers on the viral surface.     

Sugar beet yield response to different levels of saline irrigation water and leaching in an arid region

The main objective of this work was to evaluate the effects of saline irrigation water and leaching on the sugar beet yield components. In a field experiment in Rudasht region (Isfahan, Iran), three irrigation water salinity levels (1.6, 8.1, and 12.3 dS m^?1) and with/without leaching were applied. The experimental units comprised of a completely randomized block design, with split plot in four replications. The results indicated that the white sugar yield and alkalinity decreased by increasing the water salinity. Salts leaching significantly increased the root yield, white sugar yield, and white sugar concentration. With higher levels of water salinity molasses sugar, leaf weight, and the concentrations of Na, K, and α- amino-N in sugar beet significantly increased. Consequently, it appears that the use of drainage water in combination with fresh water could be recommended as a strategic management way to grow sugar beet in the investigated arid region.     

Available alkalinity and N mineralization are key factors regulating soil pH value of an organically amended Iranian agricultural soil

This study was conducted to evaluate short- and long-term effects of poultry and sheep manures, as well as sunflower, canola, and potato residues, which commonly are being used as organic amendments (OAs) in agricultural soils, on the pH value, buffering capacity, and nitrogen (N) turnover of a sub-alkaline agricultural soil using laboratory incubation. The tested OAs had pH values ranging from alkaline (manures) to acidic (plant residues), and their effects of the short- and log-term on soil pH value were assessed by fractionation of the OAs alkalinity and evaluating the contribution of OA-borne N mineralization to soil acidity. On average, 45% of potential alkalinity in tested OAs was available for acid-base reactions, soluble alkalinity accounted for 58, 80, 32, 50, and 50% of the excess cations for poultry manure, sheep manure, sunflower, canola, and potato residues, respectively. Buffering capacity of the tested OAs was higher for sunflower residues, potato residues, and poultry manure and lower for canola residues and sheep manure. The tested OAs showed different N mineralization potential, and during the 100 days of incubation, soils amended with sheep manure, poultry manure, and potato residues released 107, 118, 129, and 240?mg?N?kg^?1 soil, respectively, more than double than that released from unamended soil. Our results demonstrated that long-term impact of OAs on the soil pH value is not related to the initial OAs pH value and soluble alkalinity and that available alkalinity and N mineralization are key factors regulating the soil pH value on the long-term.     

Mannose receptor-mediated regulation of serum glycoprotein homeostasis

Carbohydrates are thought to function as tags that mark circulatory glycoproteins for rapid clearance. To examine the role of the mannose receptor (MR) in glycoprotein clearance, we generated mice genetically deficient in MR. MR-/- mice were defective in clearing proteins bearing accessible mannose and N-acetylglucosamine residues and had elevated levels of eight different lysosomal hydrolases. Proteomic analysis of MR-/- and control mouse sera showed that an additional 4 out of 52 proteins identified were elevated in MR-/- serum. Each of these is up-regulated during inflammation and wound healing. Thus, MR appears to operate as an essential regulator of serum glycoprotein homeostasis.     

A wind tunnel experiment to investigate the effect of polyvinyl acetate,biochar, and bentonite on wind erosion control

Due to the heavy costs of wind erosion control measures, the correct selection of technical methods is indispensable for a sustainable land management in arid and semiarid regions. Thus, the main goal of this research was to investigate the feasibility of using the clay minerals (i.e., bentonite), polyvinyl acetate and palm biochar for reducing the wind erosion in deserts surrounding the cities. The treatments were sprayed uniformly onto the containers (5 × 35 × 105 cm, 0.37 m²) with sand (collected from sand dunes surrounding Isfahan city, central Iran) in 3 replicates. The experiments were conducted in a wind tunnel with sequential repetitions after 1, 10, and 20 weeks. Among the studied treatments, the bentonite planters demonstrated to be the most effective soil erosion control measure by reducing soil loss and improving sand ablation. On the contrary, the palm biochar had less influence on the soil erosion control and only a slight effect on the threshold speed. For the future, further studies are required to select the best and most relevant soil erosion control measures under field conditions considering all the environmental aspects in arid regions of Iran.