Combining agent-based and stock-flow modelling approaches in a participative analysis of the integrated land system in Reichraming, Austria

The integrated modelling of coupled socio-ecological systems in land-change science requires innovative model concepts capable of grasping the interrelations between socioeconomic and natural components. Here, we discuss the integrated socio-ecological model SERD (Simulation of Ecological Compatibility of Regional Development) that was developed for the municipality of Reichraming in Upper Austria in a participative 2-year process involving local stakeholders. SERD includes three main components: (1) an agent-based actors module that simulates decisions of farmsteads, the municipal administration and other important actors; (2) a spatially explicit (GIS based) land-use module that simulates land-use change at the level of individual parcels of land and (3) an integrated socio-ecological stock-flow module that simulates carbon and nitrogen flows through both socioeconomic and ecological system compartments. We report on outcomes of a scenario analysis that outlines possible future trajectories depending on both external (e.g. agricultural subsidies and prices) and internal (e.g. innovation, willingness to co-operate) factors. We find that both external and internal factors can affect the behaviour of the integrated system considerably. Local and regional policies are found to be able to counteract adverse global socioeconomic conditions to some extent, but not to reverse the trend altogether. We also find strong interdependencies between socioeconomic and ecological components of the system. Fully evaluating these interdependencies is, however, not possible at the local scale alone and will require explicit consideration of higher-level effects in future research.     

Rootstocks For Jaffa and Joppa Oranges

Experiments to determine tithe effect of a soil cap on the growth of a lettuce crop are described. The cap, which was formed by rain or by the application of irrigation water after the plants had become established, had no effect on crop yield in any of the experiments. Measurements of gaseous diffusion rates through capped and uncapped soil surfaces suggest that a dry cap is unlikely to have any effect on soil aeration, whereas a wet cap may interfere with aeration especially on soils having a low percentage air space.     

A New Cell Wall Located N-rich Protein is Strongly Induced During the Hypersensitive Response in Glycine Max L.

Soybean (Glycine max (L.) Merill, cv. Williams 82) plants and cell cultures respond to avirulent pathogens with a hypersensitive reaction. After inoculation of soybean with Pseudomonas syringae pv. glycinea, carrying the avirulence gene avrA, or zoospores from the fungus Phytophthora sojae Race 1, a resistance-gene-dependent cell death programme is activated. A new gene was identified by differential display of mRNAs that is specifically activated during the early phase of incompatible pathogen-soybean interactions but does not respond to compatible pathogens. The gene is strongly induced within 2h after addition of P. sojae zoospores. A similar kinetic pattern was observed for P. syringae (avrA) inoculated soybean cell cultures. The gene encodes a deduced protein of 368 amino acids with a very high content of asparagine and was therefore termed N-rich protein (NRP). The protein is composed of two distinct domains, of which only the C-terminal domain has striking homology to proteins of unknown function from other plants. An antibody raised against the recombinant NRP recognizes a protein of 42kDa. The protein is located in the cell wall as indicated by cell fractionation studies. Comparison of the genomic DNA-sequence with the cDNA, identified two introns within the open reading frame. The NRP-gene is not directly induced by salicylic acid or hydrogen peroxide, indicating a distinct and specific signal transduction pathway which is only activated during programmed cell death. The NRP-gene appears to be a new marker in soybean activated early in plant disease resistance.     

High-resolution protein structure determination by serial femtosecond crystallography

Structure determination of proteins and other macromolecules has historically required the growth of high-quality crystals sufficiently large to diffract x-rays efficiently while withstanding radiation damage. We applied serial femtosecond crystallography (SFX) using an x-ray free-electron laser (XFEL) to obtain high-resolution structural information from microcrystals (less than 1 micrometer by 1 micrometer by 3 micrometers) of the well-characterized model protein lysozyme. The agreement with synchrotron data demonstrates the immediate relevance of SFX for analyzing the structure of the large group of difficult-to-crystallize molecules.     

Effects of perennial fodder crops on soil structure in agricultural headlands

In agricultural headlands, rooting and yield of crops may be limited because of soil‐structure changes as a consequence of multiple passes of turning machinery. We hypothesized that perennial forage crops can substantially alter soil structure in agricultural headlands. On one experimental field and two commercial farms on Haplic Luvisols from respectively loess and sandy loess in the Lower Rhine Bay (Germany), we investigated how 4 y of continuously grown grass/clover or alfalfa affected soil structure and the performance of subsequent spring wheat. Compared with a crop rotation with annual plowing to 30 cm soil depth, perennial forage crops led to increased soil C content (+1.3% to +22.8%) and N content (+4.2% to +15.1%), higher densities of medium and coarse biopores at a depth of 35 cm, more large water‐stable soil macroaggregates, higher biomass and abundance of anecic earthworms, and higher grain yield and grain protein content of spring wheat grown as the following crop. Root‐length density of spring wheat in the subsoil was not affected by the preceding perennial fodder crops in two of the three field trials. We concluded that besides increasing N input to the soil, perennial cropping of grass/clover or alfalfa has effects on soil structure that may substantially reduce yield losses in agricultural headlands.     

Beziehung zwischen Bodenorganismen und Gefügeentwicklung auf Löß-Neuland unter Acker- und Waldnutzung

Relationship between soil organisms and soil structure in new reclaimed soils derived from loess under agricultural and forestral use In the Rhenish Browncoal District est of Cologne he question occurs wether forestry or agriculture is the better form of primary use to force structure development in new reclaimed soils derived from loess. The investigations on 10–25 years old reclaimed soils under forestral and agricultural use indicate that humus content, microbiological activities as well as the number of soil meso- and macrofauna individuals like earthworms are increasing with growing age of the forest soils. These processes and the strucutre development are faster under forestral use. Here after about 20–30 years conditions are similiar to those of undisturbed forest soils in comparable substrates. So from the ecological point of view temporal priority should be given to forestral use.     

Constructed wetlands for the treatment of organic pollutants

Background  Constructed wetlands (wetland treatment systems) are wetlands designed to improve water quality. They use the same processes that occur in natural wetlands but have the flexibility of being constructed. As in natural wetlands vegetation, soil and hydrology are the major components. Different soil types and plant species are used in constructed wetlands. Regarding hydrology surface flow and subsurface flow constructed wetlands are the main types. Subsurface flow constructed wetlands are further subdivided into horizontal or vertical flow. Many constructed wetlands deal with domestic wastewater where BOD and COD (Biochemical and Chemical Oxygen Demand respectively) are used as a sum parameter for organic matter. However, also special organic compounds can be removed. Objective  The objectives are to summarise the state-of-the-art on constructed wetlands for treatment of specific organic compounds, to the present the lack of knowledge, and to derive future research needs. Methods  Case studies in combination with a literature review are used to summarise the available knowledge on removal processes for specific organic compounds. Results and Discussion  Case studies are presented for the treatment of wastewaters contaminated with aromatic organic compounds, and sulphonated anthraquinones, olive mill wastewater, landfill leachate, and groundwater contaminated with hydrocarbons, cyanides, chlorinated volatile organics, and explosives. In general the removal efficiency for organic contaminants is high in all presented studies. Conclusion  Constructed wetlands are an effective and low cost way to treat water polluted with organic compounds. There is a lack of knowledge on the detailed removal pathways for most of the contaminants. Removal rates as well as optimal plant species are substance-specific, and also typically not available. If a constructed wetland provides different environmental conditions and uses different plant species the treatment efficiency can be improved. Recommendations and Outlook  There is a great need to lighten the black box ‘constructed wetland’ to obtain performance data for both microbial activity and the contribution of the plants to the overall removal process. Also genetic modified plants should be considered to enhance the treatment performance of constructed wetlands for specific compounds.     

Gating the selectivity filter in ClC chloride channels

ClC channels conduct chloride (Cl-) ions across cell membranes and thereby govern the electrical activity of muscle cells and certain neurons, the transport of fluid and electrolytes across epithelia, and the acidification of intracellular vesicles. The structural basis of ClC channel gating was studied. Crystal structures of wild-type and mutant Escherichia coli ClC channels bound to a monoclonal Fab fragment reveal three Cl- binding sites within the 15-angstrom neck of an hourglass-shaped pore. The Cl- binding site nearest the extracellular solution can be occupied either by a Cl- ion or by a glutamate carboxyl group. Mutations of this glutamate residue in Torpedo ray ClC channels alter gating in electrophysiological assays. These findings reveal a form of gating in which the glutamate carboxyl group closes the pore by mimicking a Cl- ion.