A streak disease of pearl millet caused by a leafhopper-transmitted geminivirus

The cause of a streak disease of pearl millet (Pennisetum glaucum), originating from Nigeria, has been attributed to a geminivirus belonging to the African streak virus cluster. A full-length, infectious clone of the virus was obtained which was transmissible by the vectorCicadulina mbila (Naudé). Analysis of the complete nucleotide sequence of the coat protein gene of this virus shows it to be most closely related to sugarcane streak virus. The possible evolutionary implications of this finding are discussed.     

Effect of Citrate Concentration on the Extraction Efficiency of Selected Micronutrients from Soil

This study was carried out with the objective of evaluating the effect of citrate concentration on the extraction efficiency of some micronutrients from soil. Composite surface soil samples (0–20 cm) were collected from Eastern Harage Zone (Babile and Haramaya Districts), Wolaita Zone (Damot Sore, Boloso Bombe, Damot Pulasa and Humbo Districts) and Dire Dawa Administrative Council in purposive sampling. The treatments were arranged in completely randomized design (CRD) with three replications. A greenhouse pot experiment with soybean plant was conducted to determine the correlation between soil test methods and the selected micronutrients, such as iron (Fe), copper (Cu), manganese (Mn) and zinc (Zn) in the leaves of the plant. The results showed that, among the different citrate concentrations with strontium chloride (SrCl₂) tested for the determination of available Fe, Mn and Zn, the highest correlation coefficients (r = 0.82, p < 0.05), (r = 0.96, p < 0.001) and (r = 0.98, p < 0.001) were found between the diethylenetriamine pentaacetic acid (DTPA) method and 0.02 M strontium chloride (SrCl₂)-0.025 M citric acid extractant, respectively. Therefore, 0.02 M SrCl₂-0.025 M citric acid extractant is considered to be the most effective for the determination of Fe, Mn and Zn in soils of the studied areas. Similarly, high correlation coefficients (r = 0.97, p < 0.001) were found between DTPA and 0.02 M SrCl₂-0.05 M citric acid and (r = 0.88, p < 0.01) between DTPA and 0.02 M SrCl₂-0.025 M citric acid extractants for the determination of available Cu from soils. Hence, the 0.02 M SrCl₂-0.05 M citric acid extractant was shown to be the best for the determination of Cu in soils of the studied areas. However, considering the use of universal extractant, the 0.02 M SrCl₂-0.025 M citric acid extractant could easily be adopted as a procedure for the determination of Fe, Cu, Mn and Zn for both agricultural and environmental purposes. The greenhouse experiment confirmed the result.     

Screening of Ethiopian sorghum (Sorghum bicolor) landraces for their performance under Striga hermonthica ‐infested conditions

Striga hermonthica is a major constraint to sorghum production and productivity in sub‐Saharan Africa, Ethiopia, in particular. The objectives of this study were to evaluate the performance of 49 sorghum genotypes based on their reaction to S. hermonthica and investigate the relationships among yield and Striga resistance traits, including the Striga emergence count, area under Striga number progress curve, area under Striga severity progress curve, grain yield under infested, grain yield under non‐infested conditions and relative yield loss. The genotypes differed significantly in all measured parameters under Striga‐infested and non‐infested conditions. The genotypes ‘Birhan’, ‘Gubiye’, Wolegie, Zegerie, Nechmashila I, Woftel, Tetron and Eyssa were identified as promising ones based on grain yield and Striga‐related traits. On the other hand, the genotypes Jamyo, Bobie, Gedido, Mankebar and Zengada had moderate Striga numbers with low relative yield loss as compared with susceptible checks. The most promising variety, Zegerie, Mankebar and Zengada, out yielded the standard resistant checks ‘Birhan’ and ‘Gubiye’ under Striga infestation. Ward cluster analysis grouped the 49 sorghum genotypes in to four distinct clusters under Striga‐infested conditions. All members of clusters II and III showed the highest yielding group with the lowest to moderate Striga number, while cluster IV supported the lowest yield with the highest Striga number. Significant negative correlations were observed between yield‐ and Striga‐related traits. Highly significant and strong correlations were observed among Striga resistance indices, indicating that any of the Striga resistance parameters can be used as an indicator of resistance. The wide variations in grain yield among genotypes under Striga‐infested conditions would be invaluable genetic resources for production in Striga endemic areas of Ethiopia.     

Public sector soybean (Glycine max) breeding: Advances in cultivar development in the African tropics

Formal public sector soybean breeding in Africa spans over four decades, and it was initiated by the International Institute of Tropical Agricultural (IITA). As the demand of soybean continues to outstrip production, strategic projects such the Tropical Legume (TL) were initiated, in which the main goal was to enhance the productivity of soybean in the farmers’ fields in Sub‐Saharan Africa. One of the strategies to enhance the productivity of soybean in the farmers’ fields is through developing and deploying improved soybean varieties in the target countries. Through the TL I and TL II projects, a number of varieties were released in the target countries, Kenya, Nigeria, Malawi and Mozambique by employing participatory variety selection (PVS). This review provides highlights of the achievements made by IITA breeding programme and insights of what needs to be done to enhance yield improvement for soybean in Africa using demand‐driven breeding approaches.     

Haplotype analysis of β-actin gene for its association with sperm quality and boar fertility

β‐actin (ACTB) was examined as a direct functional candidate gene for the possible association with sperm concentration, motility (MOT), semen volume per ejaculate, plasma droplet rate, abnormal sperm rate (ASR) and the fertility traits, non‐return rate and number of piglets born alive (NBA). Three polymorphisms in intron 3 (T>C) and one polymorphism in exon 4 (T>C) of porcine ACTB gene were identified by comparative sequencing of animals of the breeds Pietrain and Hampshire. Association analysis revealed that haplotypes affected the variation of the traits MOT, ASR and NBA. The beneficial haplotypes may provide considerable improvement of sperm quality and fertility in the tested commercial boar population.     

Molecular characterization of Newcastle disease viruses isolated from rural chicken in northwest Ethiopia reveals the circulation of three distinct genotypes in the country

Newcastle disease (ND) is a highly contagious disease that affects many species of birds and causes significant economic losses to the poultry industry worldwide. Fifteen Newcastle disease virus (NDV) isolates obtained from rural chickens in northwest Ethiopia in 2011 and 2012 were characterized genotypically. The main functional region of the F gene was amplified and sequenced (260 nucleotides). Among the Ethiopian NDV isolates, 2 isolates had the virulent motif ¹¹²R-R-Q-K-R-F¹¹⁷ at the cleavage site of the fusion protein while 13 isolates contained the lentogenic motif ¹¹²G-G/R-Q-G-R-L¹¹⁷. Phylogenetic analysis based on the variable region of the F gene indicated that the two isolates exhibiting the virulent motif belonged to lineage 5 (genotype VII) subgenotype d and the remaining 13 isolates were grouped into lineage 2 (genotype II). The nucleotide sequences of lineage 5 isolates were genetically related to the Sudanese NDV isolates, suggesting potential epidemiological link of ND outbreaks between neighbouring countries. The lentogenic strains shared similarities with La Sota vaccine strain and probably originated from the vaccine strain either through direct exposure of birds to the live vaccine or to infectious La Sota-like strains circulating in rural poultry. This study provides genetic evidence on the existence of different NDV genotypes circulating in the rural poultry in Ethiopia. The virulent NDV continues to be a problem in poultry sector in Ethiopia, and their continuous circulation in rural and commercial poultry calls for improved surveillance and intensified vaccination and other control measures.