Pedogenic carbonate recrystallization assessed by isotopic labeling: a comparison of 13C and 14C tracers

The C isotopic composition (δ¹³C) of pedogenic carbonates reflects the photosynthetic pathway of the predominant local vegetation because pedogenic (secondary) CaCO₃ is formed in isotopic equilibrium with soil CO₂ released by root and rhizomicrobial respiration. Numerous studies show the importance of pedogenic carbonates as a tool for reconstructing paleoecological conditions in arid and semiarid regions. The methodological resolution of these studies strongly depends on the time scale of pedogenic carbonate formation, which remains unknown. The initial formation rate can be assessed by ¹⁴C labeling of plants grown on loess and subsequent incorporation of ¹⁴C from rhizosphere CO₂ into newly formed carbonate by recrystallization of loess CaCO₃. We tested the feasibility of ¹⁴C and ¹³C tracers for estimating CaCO₃ recrystallization rates by simultaneous ¹⁴C and ¹³C labeling and comparison with literature data. ¹⁴C labeling was more efficient and precise in assessing recrystallization rates than ¹³C labeling. This is connected with higher sensitivity of ¹⁴C liquid scintillation counting when compared with δ¹³C measurement by IRMS. Further, assessment of very low amounts of incorporated tracer is more precise with low background signal (natural abundance), which is true for ¹⁴C, but is rather high for ¹³C. Together, we obtained better reproducibility, higher methodological precision, and better plausibility of recrystallization rates calculated based on ¹⁴C labeling. Periods for complete CaCO₃ recrystallization, extrapolated from rates based on ¹⁴C labeling, ranged from 130 (125–140) to 240 (225–255) y, while it was ≈ 600 (365–1600) y based on the ¹³C approach. In terms of magnitude, data from late‐Holocene soil profiles of known age provide better fit with modeled recrystallization periods based on the ¹⁴C approach.     

Stable carbon and oxygen isotopes in pedogenic carbonate coatings of chernozems in the Southern Cis-Baikalia as indicators of local environmental changes

Carbonate coatings formed on the lower surfaces of pebble inclusions in the Holocene-Late Pleistocene sediments on the Irkutsk-Cheremkhovo Plain have been studied. The coupled analysis of the carbon isotope composition of the soil organic matter and carbonate coatings has indicated the formation of coatings under conditions of phytocenoses with the predominance of C3 plants. A significant effect of the atmospheric CO₂ on the carbon isotope composition in the coatings has been noted, which could be related to their formation under low soil respiration rates. The latter was apparently due to the periodic freezing of the soil, which affected the structure of the coatings and was most manifested in the formation of spherulites in their outer layers. The carbonate coatings consist of two laminae significantly differing in their structure and stable isotope composition, which allows separating two main stages of their formation. The lightening of the carbon isotope composition in the outer (younger) layers of the coatings compared to their inner (older) ones coincides with the increase of the δ¹⁸O values, which points to changes of the environmental conditions in the studied area during the formation of the coatings.     

Error propagation in stock-difference and gain–loss estimates of a forest biomass carbon balance

According to the United Nations International Panel on Climate Change good practice guidance, an annual forest biomass carbon balance (AFCB) can be estimated by either the stock-difference (SD) or the gain–loss (GL) method. An AFCB should be accompanied by an analysis and estimation of uncertainty (EU). EUs are to be practicable and supported by sound statistical methods. Sampling and model errors both contribute to an EU. As sample size increases, the sampling error decreases but not the error due to errors in model parameters. Uncertainty in GL AFCB estimates is dominated by model-parameter errors. This study details the delta technique for obtaining an EU with the SD and the GL method applicable to the carbon in aboveground forest biomass. We employ a Brownian bridge process to annualize the uncertainty in SD AFCBs. A blend of actual and simulated data from three successive inventories are used to demonstrate the application of the delta technique to SD- and GL-derived AFCBs during the years covered by the three inventories (SD) and rescaled national wood volume harvest statistics (GL). Examples are limited to carbon in live trees with a stem diameter of 7 cm or greater. We confirm that a large contribution to the uncertainty in an AFCB comes from models used to estimate biomass. Application of the delta technique to summary statistics can significantly underestimate uncertainty as some sources of uncertainty cannot be quantified from the available information. We discuss limitations and problems with the Monte Carlo technique for quantifying uncertainty in an AFCB.     

Genetic variability in Turkmen populations of Pistacia vera L.

Seedlings of Pistacia vera L. developed from seeds of two separate populations in Turkmenistan, Kepele and Agachli, were evaluated for their growth potential and genetic polymorphism. Plant growth rate as well as random amplified polymorphic DNA (RAPD) analysis showed distinct differences between the two populations. In plant height growth rate, 17 Agachli accessions were 1.3 times higher on average than that of 10 accessions of Kepele (significant at p = 0.046) and 1.2 times higher for trunk diameter growth rate (p = 0.062). Cluster analysis divided most accessions into two main genetic groups according to their geographic origin. The Agachli group was further divided into two subgroups. One Kepele accession (K4), was genetically different from the rest and clustered on a separate outgroup. Two Agachli accessions (A12 and A17) were outside the two main populations clusters. Accessions K9 and K10 from Kepele were exceptional and were clustered in each of the two Agachli's subgroups, indicating a close genetic relationship between the two populations. In addition, high similarity values (0.58–1.00) and small genetic distances reflect plausible gene flow between Kepele and Agachli, which are 100 Km apart. Mantel test revealed significant relationship between the RAPD and the morphological traits matrices, pointing to the genetic basis for the measured differences in the growth rate. Growing the accessions on the same plot, under similar conditions enabled the evaluation of genotypic differences. The combination of morphological traits and molecular markers will further assist in preservation of genetic variability and cultivation of useful genotypes of P. vera L.     

Global warming trend of mean tropospheric temperature observed by satellites

We have analyzed the global tropospheric temperature for 1978 to 2002 with the use of passive microwave sounding data from the NOAA series of polar orbiters and the Earth Observing System Aqua satellite. To accurately retrieve the climatic trend, we combined the satellite data with an analytic model of temperature that contains three different time scales: a linear trend and functions that define the seasonal and diurnal cycles. Our analysis shows a trend of +0.22 degrees to 0.26 degrees C per 10 years, consistent with the global warming trend derived from surface meteorological stations.     

A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition

In bacteria, promoter recognition depends on the RNA polymerase sigma subunit, which combines with the catalytically proficient RNA polymerase core to form the holoenzyme. The major class of bacterial promoters is defined by two conserved elements (the -10 and -35 elements, which are 10 and 35 nucleotides upstream of the initiation point, respectively) that are contacted by sigma in the holoenzyme. We show that recognition of promoters of this class depends on the "flexible flap" domain of the RNA polymerase beta subunit. The flap interacts with conserved region 4 of sigma and triggers a conformational change that moves region 4 into the correct position for interaction with the -35 element. Because the flexible flap is evolutionarily conserved, this domain may facilitate promoter recognition by specificity factors in eukaryotes as well.     

Ca2+ Effects on K+ Fluxes in Arabidopsis Seedlings Exposed to Al3+

Potassium transport was investigated in the root elongation zone of Arabidopsis seedlings during the first minutes of Al³⁺ exposure, using the non-invasive MIFE microelectrode technique. To prevent pH changes during Al³⁺ application, and to separate aluminium from acidic stress, plants were pre-treated with 5 mM homoPIPES before addition of AlCl₃ (pH 4.2). The 30-min treatment with 50 or 500 μM AlCl₃ led to a significant increase in K⁺ efflux in solutions containing 100 μM CaCl₂. This efflux was suppressed by high concentrations of Ca²⁺ (10 mM) in the bathing solution. Our results suggest that elevated external Ca²⁺ activities can sustain K⁺ influx in the root elongation zone during Al³⁺ exposure either by maintaining [Ca²⁺]_cyt or by affecting Al³⁺ uptake across the plasma membrane.