Effect of alien cytoplasm and fertility restorer genes on agronomic and physiological traits of Brassica juncea (L.) Czern

To assess the effect of alien cytoplasm and fertility restorer genes on agronomic and physiological traits in Brassica juncea, cytoplasmic male sterile (CMS) and fertility restorer lines involving five alloplasms in three nuclear backgrounds were constituted through repeated backcrossing. These lines were evaluated along with euplasmic lines for agronomic traits in field experiments. Respiration efficiency of in vitro cultured hypocotyls, and chlorophyll content in leaves were also estimated. Significant adverse effects of trachystoma and catholica cytoplasms on yield‐contributing traits and yield were noticed. The restorer gene corrected the floral defects in CMS trachystoma and restored yield to the level of euplasmic line, while it did so only partly in CMS catholica. Restorer genes had no adverse effect on traits in any of the systems. On the contrary, the Rf gene of moricandia CMS system exerted a positive effect on leaf chlorophyll content. Likewise, in vitro assay indicated the moricandia CMS system as vigorous. The moricandia CMS plants gave higher seed yield perhaps due to overall better vigour and higher leaf chlorophyll content.     

Interactive effects of chlorimuron‐ethyl and copper(II) on their sorption and desorption on two typical Chinese soils

Concern about combined pollution of agricultural ecosystems by chlorimuron‐ethyl (CHL) and copper (Cu) has increased of late, particularly in northeastern China. Sorption and desorption of CHL and Cu on soils and their interactive effects strongly affect their mobility and bioavailability. Thus, the interaction between CHL and Cu(II) with regard to their sorption and desorption on brown earth (BE, luvisols) and black soils (BS, phaeozem), two typical soils in northeastern China, was investigated by using batch experiments. The results indicated that the presence of Cu(II) increased the sorption of CHL on the two soils, which can be attributed to decreased pH in the equilibrium solution and Cu‐bridging. The formation of a Cu‐CHL complex with stronger affinity to the soils than CHL itself may be another mechanism. Addition of Cu(II) also enhanced the hysteresis effect of CHL desorption from BS but decreased that from BE. CHL at small concentrations promoted Cu(II) slightly sorption on BE and BS by the bridging effect of CHL. In addition, CHL suppressed Cu(II) desorption from the two soils, decreasing the mobility and bioavailability of Cu(II).     

QTL analysis for grain weight in common wheat

Quantitative trait loci (QTL) analysis for grain weight (GW = 1000 grain weight) in common wheat was conducted using a set of 100 recombinant inbred lines (RILs) derived from a cross ‘Rye Selection 111 (high GW) × Chinese Spring (low GW)’. The RILs and their two parental genotypes were evaluated for GW in six different environments (three locations × two years). Genotyping of RILs was carried out using 449 (30 SSRs, 299 AFLP and 120 SAMPL) polymorphic markers. Using the genotyping data of RILs, framework linkage maps were prepared for three chromosomes (1A, 2B, 7A), which were earlier identified by us to carry important/major genes for GW following monosomic analysis. QTL analysis for GW was conducted following genome-wide single marker regression analysis (SMA) and composite interval mapping (CIM) using molecular maps for the three chromosomes. Following SMA, 12 markers showed associations with GW, individual markers explaining 6.57% to 10.76% PV (phenotypic variation) for GW in individual environments. The high grain weight parent, Rye Selection111, which is an agronomically superior genotype, contributed favourable alleles for GW at six of the 12 marker loci identified through SMA. The CIM identified two stable and definitive QTLs, one each on chromosome arms 2BS and 7AS, which were also identified through SMA, and a third suggestive QTL on 1AS. These QTLs explained 9.06% to 19.85% PV for GW in different environments. The QTL for GW on 7AS is co-located with a QTL for heading date suggesting the occurrence of a QTL having a positive pleiotropic effect on the two traits. Some of the markers identified during the present study may prove useful for marker-assisted selection, while breeding for high GW in common wheat.     

Enzyme Responses to Phytoremediation of PAH-Contaminated Soil Using Echinacea purpurea (L.)

Water, Air, &; Soil Pollution - This article evaluates mercury-resistant autochthonous filamentous fungi’s role in mercury transformation and mobility with respect to mercury...     

EFFECT OF SALINIZATION OF SOIL ON GROWTH,WATER STATUS AND NUTRIENT ACCUMULATION IN SEEDLINGS OF ACACIA AURICULIFORMIS (FABACEAE)

Greenhouse experiments were conducted to assess the effects of salinization of soil on emergence, growth, water status, proline content, and mineral accumulation of seedlings of Acacia auriculiformis A. Cunn. ex Benth. (Fabaceae). Sodium chloride (NaCl) was added to the soil and salinity was maintained at 0.3, 3.9, 6.0, 7.9, 10.0, 12.1, and 13.9 dS m^?1. Salinity caused reduction in water potential of tissues, which resulted in internal water deficit to plants. Consequently, seedling growth significantly decreased with increase in soil salinity. Proline content in tissues increased with increase in salinity. Potassium and sodium content significantly increased in tissues as salinity increased. Nitrogen content significantly increased in tissues with salinization of soil. Phosphorus, calcium and magnesium content significantly decreased as salinity increased. Changes in tissues and whole-plant accumulation patterns of other nutrients, as well as possible mechanisms for avoidance of sodium toxicity in this tree species in response to salinity, are discussed.     

QTL identification for molecular breeding of fibre yield and fibre quality traits in jute

In jute (Corchorus olitorius), quantitative trait loci (QTL) analysis was conducted to study the genetics of eight fibre yield traits and two fibre quality traits. For this purpose, we used a mapping population consisting of 120 recombinant inbred lines (RILs) and also used a linkage map consisting of 36 SSR markers that was developed by us earlier (Das et al. 2011). The RIL population was derived from the cross JRO 524 (coarse fibre) × PPO4 (fine fibre) following single seed descent. Using single-locus analysis involving composite interval mapping, a total of 21 QTLs were identified for eight fibre yield traits whereas for fibre quality (fibre fineness), only one QTL was detected. The QTL for fibre fineness explained 8.31–10.56% of the phenotypic variation and was detected in two out of three environments. Using two-locus analysis involving QTLNetwork, as many as 11 M-QTLs were identified for seven fibre yield traits (excluding top diameter) and one M-QTL was identified for fibre fineness which accounted for 4.57% of the phenotypic variation. For six fibre yield traits, we detected 16 E-QTLs involved in nine QQ epistatic interactions. For fibre fineness, four E-QTLs involved in two QQ epistatic interactions and for fibre strength, six E-QTLs involved in three QQ epistatic interactions were identified. Eight out of the 11 M-QTLs observed for the fibre yield traits were also involved in QE interactions; for fibre fineness and fibre strength, no QE interactions were observed.     

A preliminary genetic analysis of fibre traits and the use of new genomic SSRs for genetic diversity in jute

Jute is one of the most important fibre crops, which is second only to cotton in providing environment-friendly (biodegradable and renewable) ligno-cellulose fibre. In order to improve this largely neglected crop, we conducted a preliminary study involving the following: (i) analysis of nature and extent of the genetic variability for fibre yield and four other related traits in a set of 81 genotypes belonging to two commercially cultivated Corchorus species (45 genotypes of C. olitorius + 36 genotypes of C. capsularis), (ii) development and analysis of a set of simple sequence repeat (SSR) markers from C. olitorius, and (iii) use of a sub-set of SSRs for assessment of genetic diversity in the above set of 81 genotypes. The results suggested quantitative nature of fibre yield and other related traits, with a preponderance of dominance component in genetic variance. A sub-set of 45 SSRs derived from C. olitorius, when used for a study of DNA polymorphism and genetic diversity, showed high transferability of these C. olitorius SSRs to C. capsularis. The average number of alleles for individual SSRs was surprisingly low (3.04 for both species, 2.02 for C. capsularis and 2.51 for C. olitorius), and so was the average polymorphic information content (PIC; 0.23 and 0.24 in two species). In the dendrogram obtained using a similarity matrix, the 81 genotypes were grouped into three clusters, which largely corresponded to the two species, Cluster I belonging mainly to C. capsularis and the other two closely related clusters (clusters II and III) belonging to C. olitorius. It was also shown that a minimum of 15 SSRs could give the same information as 41 SSRs, thus making many SSRs redundant. The SSR markers developed during the present study and to be developed in future will prove useful not only for evaluation of genetic diversity, but also for molecular mapping/QTL analysis, and for comparative genome analysis of the two Corchorus species. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Observations by the international tsunami survey team in Sri Lanka

In response to the 26 December 2004 tsunami, a survey team of scientists was dispatched to Sri Lanka. Measurements made by the team show that the tsunami elevation and runup ranged from 5 to 12 meters. Eyewitnesses report that up to three separate waves attacked the coast, with the second or third generally the largest. Our conclusion stresses the importance of education: Residents with a basic knowledge of tsunamis, as well as an understanding of how environmental modifications will affect overland flow, are paramount to saving lives and minimizing tsunami destruction.