Pathogenicity,Morpho-Species and Mating Types of <Emphasis Type="Italic">Alternaria</Emphasis> spp. causing Alternaria blight in <Emphasis Type="Italic">Pistacia</Emphasis> spp. in Turkey

Alternaria genus includes many plant pathogens on numerous hosts, causing leaf spots, rots and blights. Alternaria blight has been observed as one of the important fungal diseases of pistachio (Pistacia vera L.) as well as its wild relatives (P. terebinthus, P. lentiscus, P. khinjuk, P. atlantica, P. mutica) in Turkey. Alternaria species were sampled from Pistacia spp. hosts from different geographic regions in Turkey during field trips in late spring to early fall of 2013. Alternaria blight symptoms were observed mainly on fruits and rarely on leaves. Four hundred and twenty two of the isolates were morphologically defined as A. alternata, A. tenuissima, A. arborescens and also intermediate morpho-species between A. alternata/A. arborescens. Pathogenicity of the isolates was confirmed with host inoculations on detached fruits. Mating types of 270 isolates of Alternaria spp. from the collection were identified using a PCR-based mating type assay that amplifies either a MAT1-1 or a MAT1-2 fragment from the mating locus. Although a strongly clonal population structure was expected due to the putative asexual reproduction of these fungi, both idiomorphs were detected at equal frequencies at several different spatial scales. The distribution of mating types within each geographic region, within host species as well as in overall collection was not significantly different from 1:1. Amplified fragments of partial idiomorph sequences were obtained for representative isolates. Parsimony trees were depicted based on sequence data of mating type genes for these representative isolates as well as some other Alternaria species obtained by Genebank. Several point mutations presented a few clusters which are supported by high bootsrapped values. The Alternaria blight disease agents both from cultivated and wild hosts were pathogenic on pistachio which may cause difficulties to control the disease because of extensity of pathogen sources. Besides, equal mating type distribution of the pathogen at both geographic and host species levels suggests a potential for sexual reproduction of Alternaria spp. in Turkey.     

The effect of synthetic and natural pigments on the colour of the cichlids (<Emphasis Type="Italic">Cichlasoma severum</Emphasis> sp., Heckel 1840)

In this study, we have investigated the effects of Porphyridium cruentum (Rodophyta) as a natural pigment source and astaxanthin and β-carotene as synthetic pigment sources on the skin colour of cichlid fish (Cichlasoma severum sp., Heckel 1840), which are generally light orange with white patches and becomes shiny orange in the reproductive phase. The fish were fed diets containing 50 mg kg⁻¹ astaxanthin and β-carotene, and P. cruentum powder. The amount of both natural and synthetic pigment sources given as feed was 50 mg kg⁻¹, and the experiment was continued for 50 days. Total carotenoid content of the fish was determined spectrophotometrically at the end of the experiment. As a result, while a visible change of colour in the skin of the fish fed on the feed containing astaxanthin was observed with 0.34 ± 0.2 mg g⁻¹ of pigment accumulation, a relatively small change of colour was observed in the skin of other fish that were fed on the feed containing P. cruentum and β-carotene with 0.22 ± 0.2 mg g⁻¹ and 0.26 ± 0.1 mg g⁻¹ of pigment accumulations, respectively. Therefore, it was determined that these pigment sources have an effect on the colour of cichlid fish.     

Exploration of biosorption potential of forest industry by-product for removal of reactive dye from aqueous solution

Natural sawdust of Calabrian pine was explored as low-cost industrial by-product for a hetero-bireactive dye removal from aqueous solution in this study. Batch experiments were carried out to investigate the effects of contact time and dye concentration on biosorption efficiency. Maximum biosorption amounts were achieved almost in the 20-30 min of contact for the studied dye range (50-200 mg l ^-1). An increase in the dye concentration resulted in decrease in the percent dye removal and increase in the biosorption capacity of biosorbent. Different kinetic and isotherm models were used to examine the biosorption experimental data for elucidating the dye removal mechanism. The equilibrium data were best represented by Freundlich isotherm model confirming multilayer coverage. The kinetics of dye biosorption best obeyed the pseudo-secondorder equation. The negative value of standard Gibbs free energy change (-3.61 kJ mol^-1) indicated that physical forces were involved in the spontaneous dye biosorption. Thus, the sawdust as a possible non-conventional biosorbent presented an interesting option for bioremediation of contaminated environments by such unsafe dyes.     

A promising biosorbent for biosorption of a model hetero-bireactive dye from aqueous medium

In this study, residual shell biomass of Corylus avellana L. was used as potential biosorbent for biosorption of a model industrial hetero-bireactive dye. The biosorbent was characterized by FTIR and SEM. The batch biosorption studies were performed as a function of dye concentration and contact time. The biosorption of dye was found to be very quick. Various kinetic and isotherm models were used to evaluate the obtained experimental data. The biosorption kinetic was best represented by the pseudo-second-order model while the biosorption equilibrium was best described by Langmuir model. The maximum dye biosorption capacity of biosorbent based on Langmuir isotherm was obtained as 74.527 mg g^-1. These results showed that the use of such plant waste biomass in biosorption system could be a feasible method for the removal of such recalcitrant dye from industrial effluents to reduce operating costs.     

Activated Carbon Adsorption of Fuel Oxygenates MTBE and ETBE from Water

In order to assess as to whether treated textile effluent could be safely used to irrigate some winter vegetables, growth room experiments were conducted. Varying levels of treated and untreated textile effluents were applied to germinating seeds of some winter vegetables and their effect was evaluated on germination and early growth stage using seed germination, growth, and biochemical attributes. From the results, it was obvious that textile effluent reduced seed germination and early growth of all vegetables. However, this effect was more pronounced at the highest concentration of textile effluent. Furthermore, treated textile effluent did not show any inhibitory effect on seed germination of all vegetables. Photosynthetic pigments such as chlorophyll a and b, and protein contents were higher in the leaves of all vegetable plants irrigated with treated textile effluent than those of supplied with untreated textile effluents. It has been observed that heavy metals were lower in concentration in treated textile effluent as compared with untreated textile effluent. However, germination and growth responses of all three vegetables were different to treated or untreated textile effluents. Furthermore, the Raphanus sativus ranked as tolerant followed by Brassica campastris and Brassica napus based on germination and growth responses. In conclusion, in view of shortage of water, textile effluent could safely be used for irrigation to vegetables after proper processing.     

One century of eel growth: changes and implications

Abstract – A cooperative effort gathered a large European length‐at‐age data set (N = 45,759, Lat. 36S–61N Long. 10W–27E) for Anguilla anguilla, covering one century. To assess the effect of global warming during the last century and habitat effects on growth, a model was fitted on the data representing the conditions met at the distribution area scale. Two GLMs were designed to predict eel log(GR): one model was fitted to the whole data and the other was fitted to the female data subset. A model selection procedure was applied to select the best predictors among sex, age class, five temperature parameters and six habitat parameters (depth, salinity and four variables related to the position in the catchment). The yearly sum of temperatures above 13 °C (TempSUP13), the relative distance within the catchment, sex, age class, salinity class and depth class were finally selected. The best model predicted eel log(GR) with a 64.46% accuracy for the whole data and 66.91% for the female eel data. Growth rate (GR) was greater in habitats close to the sea and in deep habitats. TempSUP13 variable had one of the greatest predictive powers in the model, showing that global warming had affected eel growth during the last century.     

Growth and mortality of Mediterranean mussel Mytilus galloprovincialis Lam., 1819, in relation to size on longline in Mersin Bay, Izmir (Turkey – Aegean Sea)

The growth and mortality rate of different size of mussels, Mytilus galloprovincialis, were compared in Mersin bay, Izmir. Mussel sampling was performed on a monthly basis over 1 year, together with hyrobiological parameters. Water temperature, salinity, chlorophyll a, total particulate matter (TPM) and particulate organic carbon (POC) were determined. Average chlorophyll a, TPM and POC values were 3.88±1.62 μg L⁻¹, 13.12±3.68 mg L⁻¹ and 252±121.89 μg L⁻¹ respectively. Initial mean lengths of mussels for each size group were 10 mm (9.91±0.25 mm), 20 mm (20.14±0.29 mm), 30 mm (30.66±0.21 mm), 40 mm (40.14±0.21 mm), 50 mm (50.62±0.21 mm), 60 mm (59.77±0.21 mm) and 70 mm (69.47±0.62 mm). Maximum growth in length occurred during the spring–summer months. The annual length increments of mussel size groups were 46.22, 41.42, 30.3, 28.03, 20.63, 16.34 and 12.03 mm from small to large size groups respectively. Small mussels grew faster than large mussels and reached commercial size at the same time. Mortality was <5% for all groups at the end of the experiment.