Ace and ace-like genes of invasive redlegged earth mite: copy number variation,target-site mutations,and their associations with organophosphate insensitivity

Background

Invasive Australian populations of redlegged earth mite, Halotydeus destructor (Tucker), are evolving increasing organophosphate resistance. In addition to the canonical ace gene, the target gene of organophosphates, the H. destructor genome contains many radiated ace-like genes that vary in copy number and amino acid sequence. In this work, we characterise copy number and target-site mutation variation at the canonical ace and ace-like genes and test for potential associations with organophosphate insensitivity. This was achieved through comparisons of whole-genome pool-seq data from alive and dead mites following organophosphate exposure.

Results

A combination of increased copy number and target-site mutations at the canonical ace was associated with organophosphate insensitivity in H. destructor. Resistant populations were segregating for G119S, A201S, F331Y at the canonical ace. A subset of populations also had copy numbers of canonical ace > 2, which potentially helps overexpress proteins carrying these target-site mutations. Haplotypes possessing different copy numbers and target-site mutations of the canonical ace gene may be under selection across H. destructor populations. We also detected some evidence that increases in copy number of radiated ace-like genes are associated with organophosphate insensitivity, which might suggest potential roles in sequestration or breakdown of organophosphates.

Conclusion

Different combinations of target-site mutations and (or) copy number variation in the canonical ace and ace-like genes may provide non-convergent ways for H. destructor to respond to organophosphate selection. However, these changes may only play a partial role in organophosphate insensitivity, which appears to have a polygenic architecture. © 2023 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.     

Slug control in Australian canola: monitoring, molluscicidal baits and economic thresholds

Exotic slugs have become serious pests of canola, at establishment, in Southern Australian high-rainfall cropping zones. Slugs were monitored using relatively inexpensive 300 mm x 300 mm terracotta tiles acting as refuges. An investigation was made of the effects of the time of application of chelated iron baits on the slug species Deroceras reticulatum Müller and Lehmannia nyctelia Bourguignat. Baits reduced the number of surface-active slug species. A single application at sowing provided greater efficacy than one application before sowing, and efficacy was comparable with that of two applications. Canola seedling densities showed a negative response to D. reticulatum numbers; the presence of even one individual per refuge trap reduced seedling numbers below optimum densities. Thistles and other vegetation were associated with increased numbers of slugs. European guidelines for slug monitoring and damage appear to be at least partly applicable to Australian conditions.     

Three-dimensional crack monitoring by electrical resistivity measurement

Soil cracks formed by natural processes play a key role in water and gas transfer. Patterns of soil cracks are, however, difficult to characterize. Our aim here is to assess the effectiveness of three‐dimensional electrical resistivity surveys in detecting soil crack networks. A three‐dimensional electrical survey was carried out by a square array quadripole with Cu–CuSO₄ electrodes (electrode spacing of 3 cm). The measurements were made with two orientations (0° and 90°) on a block (26 cm × 30 cm × 40 cm) of soil while it dried for 18 days under controlled conditions. Two indexes, calculated from the apparent resistivity values, were evaluated to detect the degree of soil heterogeneity: (i) an anisotropy index based on the ratio between the apparent resistivity at 0° and that at 90°; and (ii) the angle‐array orientation corresponding to the preferential anisotropic orientation (maximum resistivity). The anisotropy index provided information on the presence of cracks and the orientation for crack width > 1 mm in the first pseudo‐depth (i.e. depth of investigation), while the angle‐array orientation provided information on crack extension for the whole pseudo‐depth. Information about the presence, position, orientation and extension of cracks can be obtained from an analysis of apparent resistivity obtained by a three‐dimensional electrical survey. Such direct analysis will help the resistivity inversion to detect the crack network.     

Prediction of water retention properties of clayey soils: validity of relationships using a single soil characteristic

Abstract. Regression equations successfully allowed the calculation of water retained at—0.3 × 10⁵ Pa and–15 × 10⁵ Pa matric potentials from single soil characteristics, such as bulk volume or clay content, in clayey horizons derived in similar ways from a single parent material. It is possible to use these regression equations on other soils with similar clay fabrics. The fabric is expressed numerically using the pore volume associated with clay particles.     

Consequences of slotting on the pore characteristics of a sandy soil in northeast Thailand

In the sandy soils of northeast Thailand, root development is generally limited to the topsoil (0–20 cm depth) but a simple slotting intervention (20–40 cm) significantly increased the root frequency in the slotted material (E_slot) compared with the undisturbed subsoil (E horizon). The aim of this study was to investigate the consequences of slotting on the soil structure by analysing at different scales the pore characteristics of the original soil profile and of the soil material inside the slot. These characteristics were studied using bulk density measurements, image analysis of thin sections and mercury porosimetry. Our results showed that the total porosity of the E horizon and E_slot material was similar when measured in 100 cm³ cylinders, but that the pore size distribution had been changed by slotting. The unaltered E horizon contained mainly small pores characterized by a narrow distribution related to close packing of the sand grains, associated with some biological macropores probably with poor continuity as they did not contain roots despite their size. On average, pores were larger in the E_slot material, with a broader distribution resulting from looser packing of the sand grains but with fewer biological macropores. Although slotting reduced the number of biological pores, the looser packing appeared to be more favourable to root development than the presence of macropores in the E horizon. Finally, the comparison of the porosity in the different horizons with the porosity of the E_slot material, indicated the significance of the closeness of the sand packing on root development.     

Selective control of mite and collembolan pests of pastures and grain crops in Australia

Control of invertebrate pests in broad-acre agriculture largely relies on the application of broad-spectrum pesticides, however resistance problems and environmental concerns are driving a search for alternatives including more selective products. Here we explore the feasibility of using novel chemical groupings in the control of problematic pests that attack germinating pastures and grain crops in Australia. A modified laboratory bioassay is described for testing the response of several invertebrate pests to pesticides that have contact and systemic/translaminar properties. Two contact pesticides (fenitrothion and gamma-cyhalothrin) and three pesticides with strong systemic/translaminar properties (lambda-cyhalothrin, abamectin and diafenthiuron) showed promise for control of the collembolan Sminthurus viridis and four mite pests (Halotydeus destructor, Balaustium medicagoense, Penthaleus falcatus and Bryobia sp.). No single pesticide emerged as the most efficacious against all these pests, highlighting the need for correct pest identification before making control recommendations. Incorporating these new chemical options into pest control programs may help to control emerging pests and counter pesticide resistance issues. Selective pesticides in particular are likely to be compatible with integrated control programs that promote the establishment and maintenance of beneficial natural enemies.