Resistance and resilience of soil biological indicators: A case study with multi-walled carbon nanotube

Soil ecosystem is experiencing stresses due to climate change, and soil inhabitants try to demonstrate their inherent resistance and resilience against those stresses. Application of nanomaterials as agricultural inputs could bring shifts in resistance and resilience patterns of soil microbes and associated enzymes, especially under short-term heat stress. With this background, the impacts of multi-walled carbon nanotube (MWCNT) on the resistance and resilience of soil biological indicators were evaluated. An incubation experiment was conducted with varied MWCNT concentrations (0, 50, 100, 250, and 500 mg kg^-1 soil) for 90 d after 24-h heat stress at 48 ±2 ℃ to assess the impacts of MWCNT on soil enzyme activities and microbial populations vis-à-vis their resistance and resilience indices under short-term exposure to heat stress. Enzyme activities were reduced after exposure to heat stress. Resistance indices of enzyme activities were enhanced by MWCNT application on day 1 after heat stress, whereas there was no recovery of enzyme activities after 90-d incubation. Like soil enzyme activities, resistance index values of soil microbial populations followed the similar trend and were improved by MWCNT application. Multi-walled carbon nanotube has the potential to improve resistance indices of soil enzyme activities and microbial populations under heat stress, although they could not recover to their original state during periodical incubation after heat stress. This study helps to understand the relative changes of biological indicators under MWCNT and their ability to withstand heat stress.     

Isolation and characteristics of eight novel polymorphic microsatellite loci from the genome of garlic (Allium sativum L.)

Here we characterized eight novel polymorphic SSR markers, developed from an enriched genomic library of garlic (Allium sativum L.). These SSRs produced a total of 64 alleles across 90 garlic accessions, with an average of 8 alleles per locus. Values for observed (H_O) and expected (H_E) heterozygosity ranged from 0.16 to 0.77 (mean = 0.44) and from 0.22 to 0.86 (mean = 0.65), respectively. Six loci deviated significantly (P < 0.05) from Hardy–Weinberg equilibrium (HWE). The averages of gene diversity and PIC values were 0.65 and 0.62, respectively. The mean genetic similarity coefficient was 0.4380, indicating that among garlic accessions existed wide genetic variation. Based on 64 alleles obtained by 8 SSRs, a phenogram was constructed to understand the relationships among the 90 accessions. These newly developed SSRs should prove very useful tools for genotypes identification, assessment of genetic diversity and population structure in garlic.     

Extractive components and taste aspects of fermented fish pastes and bean pastes prepared using different koji molds as starters

We have evaluated four commercially available mold starters (SP-01, NY, M1, and “for kome miso”) for fermented fish pastes with the aim of determining the effect of different koji molds on the nutritional and sensory characteristics of the fermented product. Comparative studies among different fermented fish and bean pastes were also conducted. Protein contents were considerably higher in the fermented fish pastes (22.7–24.1%) than the fermented bean pastes (8.2–12.8%). Free amino acids, oligopeptides, organic acids, mineral content, and sensory scores of the fermented fish pastes were superior to those of the bean pastes in terms of nutritional aspects. Sensory evaluation of fermented fish and bean pastes clearly indicated that different koji molds used as starters had little effect on the taste of the fermented fish pastes. However, in terms of nutritional and sensory characteristics, fermented fish pastes from trash fishes were found to be both commercially valuable and a potential gain to food processing firms among the many new generic fermented food products becoming available.     

Chromosomal and nucleolar RNA synthesis in root tips during mitosis

Comparative rates of RNA synthesis in chromatin and nucleolar fractions during mitosis in root-tip cells of Allium and Nigella were studied by pulse-labeling of cells with tritiated cytidine. Although the rate of RNA synthesis decreases in the condensing chromosomes during prophase, it remains normal in the nucleolar fraction as long as nucleoli are maintained. RNA synthesis stops in mitotic cells lacking distinct nucleoli. In the late telophase or very early interphase cells, RNA synthesis resumes at a faster rate in the pronucleolar bodies than in the chromatin.     

Bioactivity guided isolation of antipsychotic constituents from the leaves of Rauwolfia tetraphylla L

This study was undertaken to ascertain the antipsychotic properties of Rauwolfia tetraphylla L. leaves and to isolate and characterize the antipsychotic constituents. Among the MeOH extract and some alkaloidal fractions at different pHs, the alkaloidal CHCl(3) fraction at pH-9 (2C) showed the highest antipsychotic activity against dopaminergic (DA-D(2)) and serotonergic (5-HT(2A)) receptors in-vitro and amphetamine induced hyperactive mouse model in-vivo. The activity guided isolation of CHCl(3) fraction (2C) afforded six indole alkaloids: 10-methoxytetrahydroalstonine (1), isoreserpiline (2), an isomeric mixture of 11-demethoxyreserpiline (3) and 10-demethoxyreserpiline (4), α-yohimbine (5) and reserpiline (6). Given orally, alkaloids 3-6 showed significant antipsychotic activity in a dose dependent manner. None of the extract, alkaloidal fractions or alkaloids showed any extra pyramidal symptoms at the tested doses. It was also observed that MeOH extract was behaving similar to other clinically used novel atypical antipsychotics in having 5-HT(2A) occupancy greater than the DA-D(2) receptor at the tested doses. Further toxicity and safety evaluation studies of MeOH extracts of R. tetraphylla leaves at different doses (10, 100, 300 and 2000 mg/kg) on female Swiss albino mice showed that MeOH extract is non toxic. The isolated alkaloids, 3-6 could serve as a promising lead structure for drug development of treating psychotic conditions in human.     

Identification of potential sources of mungbean yellow mosaic India virus resistance in black gram (Vigna mungo) and expression of antioxidants and R-genes modulating resistance response in cultivated and its two wild relatives

Black gram is one of the most important short duration grain legume, which contributes significantly towards nutritional security and environmental sustainability. The virus specific primers confirms the presence of mungbean yellow mosaic India virus (MYMIV) in representative samples. A total of 27 cultivated and two wild species were found as highly resistant (HR) to MYMIV and validated through molecular markers. The start codon target (SCoT) markers analysis revealed that the SCoT loci, namely, SCoT-4 (2200 bp), SCot-9 (1150/ 1200 bp), SCoT-15 (1150/1100 bp), SCoT-16 (700 bp), SCoT-24 (2500 bp), SCoT-25 (700 bp), SCoT-33 (900/1000 bp), and SCoT-34 (600 bp), were found unique, able to distinguish HR and highly susceptible (HS) genotypes. Biochemical characterization and gene expression profiling revealed the higher expression of antioxidants and R-genes just after pathogen inoculation indicated the activation of defence mechanism in both cultivated and its wild relatives, which modulates the resistant responses in cultivated and wild accessions. These information will be really helpful in accelerating resistance breeding in black gram.     

Enhanced Lead Uptake by an Association of Plant and Earthworm Bioaugmented with Bacteria

Lead (Pb) is recorded as the second most hazardous pollutant of the environment. Previous cases of Pb bioremediation has been reported using single biosystem, but very few reports are available in biological approaches using multi-biosystems to achieve an enhanced bioremoval of Pb. The present study evaluated the capacity of a unique association of Pennisetum purpureum, a hyperaccumulator plant, and Lumbricus terrestris (earthworm) bioaugmented with a Pb-resistant bacterium, obtained from an industrially contaminated site and identified as isolate VITMVCJ1 Klebsiella variicola, to bioremediate Pb. The Pb-resistant gene was amplified in the bacterial isolate VITMVCJ1. The study was conducted for 60 d. Results verified that the bioaugmentation process enhanced 1) root and shoot length of the plants, 2) chlorophyll content of the plants, and 3) biofilm-producing ability of the microbes from the rhizosphere region of the plants. The total phenolic and flavonoid contents were found to be lower in the plants in the bioaugmented setup. The study also observed a reduction in the toxic effects of Pb on earthworm and plant. The earthworm was used to assess the Pb-induced stress syndrome after exposure to sublethal concentrations of Pb in the soil. A reduction in the content of malondialdehyde, a potential biomarker, on exposure to Pb demonstrated the role of the inoculum to alleviate heavy metal-induced stress in earthworms. All three symbionts accumulated Pb; Pb was accumulated mainly in the root of the plant, and poorly in the shoot of the plant and body mass of the earthworm. The bioaugmentation system exhibited stable and excellent uptake of Pb from the contaminated soils. The results of the present study suggest the positive effect of the synergistic association of the plant and earthworm with appropriate microbes for the bioremoval of Pb.