Hypoxia inducible factor 1α expression and effects of its inhibitors in canine lymphoma

Hypoxic conditions in various cancers are believed to relate with their malignancy, and hypoxia inducible factor-1α (HIF-1α) has been shown to be a major regulator of the response to low oxygen. In this study, we examined HIF-1α expression in canine lymphoma using cell lines and clinical samples and found that these cells expressed HIF-1α. Moreover, the HIF-1α inhibitors, echinomycin, YC-1 and 2-methoxyestradiol, suppressed the proliferation of canine lymphoma cell lines. In a xenograft model using NOD/scid mice, echinomycin treatment resulted in a dose-dependent regression of the tumor. Our results suggest that HIF-1α contributes to the proliferation and/or survival of canine lymphoma cells. Therefore, HIF-1α inhibitors may be potential agents to treat canine lymphoma.     

Characterisation of starch properties and physical characteristics in buckwheat (Fagopyrum esculentum Moench.) mutant lacking accumulation of ‘granule-bound starch synthase a’

The concentration of amylose, which is synthesised using granule-bound starch synthase, affects the physical properties of food. However, no studies have focused on starch properties and physical characteristics of low-amylose buckwheat. Here, we hypothesised that low-amylose buckwheat would be useful to produce new buckwheat products because low-amylose characteristics change the texture of buckwheat food. In this study, we bred relatively low-amylose buckwheat compared to wild type and investigated the causative genes of the traits, starch properties and physical properties of noodles. In the GBSSa mutant, the amylose concentration was lower than that in the wild type. Compared with the wild type, the mutant exhibited the following traits: Amylose concentration decreased by approximately 2%, setback in the Rapid Visco Analyzer decreased by 30 points and the physical characteristics of noodles in the sensory analysis were soft and sticky. These results suggest that this trait may be useful for changing the texture of foods. In addition, the mutant is promising for producing new foods with physical characteristics that are different from those of the wild type.     

Geographical patterns of morphological variation in sorghum (Sorghum bicolor (L.) Moench) germplasm from Ethiopia and Eritrea: Quantitative characters

A total of 415 sorghum (Sorghum bicolor (L.) Moench) accessions representing different regions of Ethiopia, Eritrea and a group of introduced lines were evaluated for 15 quantitative characters to determine the extent and geographical pattern of morphological variation. The extent of variation was highly pronounced for agronomically important characters for sorghum. These characters included plant height, days for 50% flowering, peduncle exsertion, panicle length and width, number and length of primary branches per panicle and thousand seed weight. Significant regional variation was also observed for most of the characters. The results implied that environmental factors such as altitude, rainfall, temperature and growing period are important in regional variation. Mean for plant height and for days for 50% flowering showed clinal variation along the gradients of rainfall pattern and growing period in Ethiopia. Moreover, there were significant positive correlation coefficients between most of the characters. This included the correlation between agronomic characters of primary interest in sorghum breeding such as plant height and days for 50% flowering and also between various characters and the altitude of the collection sites. The implications of the results in plant breeding, germplasm collection and conservation as well as the probable sources of the wide range of variation are discussed. This revised version was published online in July 2006 with corrections to the Cover Date.     

Identification of domestic cat hepadnavirus from a cat blood sample in Japan

The hepatitis B virus (Hepadnaviridae) induces chronic hepatitis and hepatic cancer in humans. A novel domestic cat hepadnavirus (DCH) was recently identified in several countries, however, the DCH infection status of cats in Japan is unknown. Therefore, we investigated the DCH infection rate of 139 cat samples collected in Japan. We identified one positive blood sample (0.78%) from a 17-year-old female cat with chronically elevated alanine aminotransferase. Phylogenetic analysis demonstrated that the DCH strain identified in this study is genetically different from strains in other countries. Further investigations are required to elucidate the evolution of DCH and the impact of DCH infection on hepatic diseases in domestic cats.     

Relating long-term rainfall variability to cattle population dynamics in communal rangelands and a government ranch in southern Ethiopia

This study reconstructed 21 years of household cattle population data in key resource (tula wells) and non-key resource (pond-water) rangelands in southern Ethiopia, as well as 15 years of government cattle breed conservation ranch data, to analyze the relationship between long-term rainfall and cattle population dynamics. For the key-and-non-key resource rangelands, we assessed the reproductive life of cows and the number of calves. For both the communal and ranch systems, we analyzed impacts of multiple droughts on calving rates and herd die-offs. Relationships between pre-drought and post-drought cattle populations were used to evaluate evidence of density-dependence. Breeding females in the key resource tula well rangelands had a longer reproductive life than in the pond-water rangelands, and they produced more calves per reproductive life. Average calving rates were 55% for the communal and 52% for the ranch. Greater reductions in calving rates during droughts implied reduced herd growth potential. Breeding females and immature animals were influenced to a much greater degree by inter-annual rainfall variability than were mature males. The data showed a downward spiral for the total cattle holdings over a 21-year period, with a decline of 54%. The evidence of density-dependence was relatively important at the local land use level as compared with the regional level. Cattle population below carrying capacity under ranch management did not reduce herd die-offs, suggesting that rainfall variability, not density, had greater influence on cattle population dynamics. Long-term trends of cattle populations in the communal and ranch systems synchronized with mean deviations of rainfall. Our results indicate that rainfall variability under the different management systems strongly influenced the dynamics of cattle population, calving rates and mortality. The claim that ranching could be a superior model for range management in Borana over the communal system was not confirmed. The decline in cattle population in southern Ethiopia indicates a need for improved drought management policy. The evidence that droughts were more harmful to breeding females and immature animals than to mature males suggested that drought management needs to focus on herd recruitment potential. For the herders in southern Ethiopia, drought management involved herd mobility and accumulation of herds during periods of favourable rainfall. In the future, the importance of government ranch could be in breed conservation for the maintenance of the Borana cattle breed through distribution of bulls during the drought recovery phase.     

Participatory monitoring of biodiversity in East African grazing lands

There are disagreements on the use of standard biodiversity monitoring methods to promote community participation. This study combined three methods to investigate questions why monitor biodiversity, what biodiversity to monitor and how participatory biodiversity monitoring can be promoted in central Uganda in East Africa. The question of why biodiversity should be monitored concerns the justification for monitoring, while the question of what to monitor concerns the choice of biodiversity variables, and the question of how to monitor biodiversity concerns the links between the data generated from monitoring and problems associated particularly with regard to community participation. The study selected landscape and sampling scales (i.e. plots) for participatory monitoring of biodiversity. Herders identified main landscape patches and plant species. Herder value‐weighted indicators, such as invasive species and range condition scores (i.e. composite indicators representing species palatability, composition, cover, density and richness) were used for measuring biodiversity in their grazing lands. To understand what biodiversity to monitor, we interpreted the correlation between biodiversity indicators and herder value‐weighted range conditions. Herders defined biodiversity from a utilitarian perspective, which is inconsistent with the conventional scientific goals of biodiversity conservation which focus on preservation of the total species pool. To address the question of how to monitor biodiversity, evidence from the folk taxonomy of sampled plant species and other proxy biodiversity indicators, including herder value‐weighted range condition scores, were compared to understand scale dependence. We inferred that the landscape scale monitoring was more sensitive to measuring biodiversity than the conventional scales of plots. Copyright © 2008 John Wiley & Sons, Ltd.     

EFFECTS OF GRAZING INTENSITY AND BUSH ENCROACHMENT ON HERBACEOUS SPECIES AND RANGELAND CONDITION IN SOUTHERN ETHIOPIA

Grazing intensity and bush encroachment are disturbance factors that may alter the floristic composition of herbaceous species. This paper investigates impacts of grazing (intensity) and bush encroachment on herbaceous species and rangeland conditions in Borana, southern Ethiopia. Herbaceous species richness and the abundance of each species were greater in the light‐ and moderate‐grazed areas than heavy‐grazed sampling plots. Similarly, herbaceous species richness was highest at an intermediate level of biomass and seems to decline as biomass increases. Among a total of 40 herbaceous species recorded, 20 per cent were tolerant of grazing, whereas the remaining 80 per cent were highly susceptible to heavy grazing. In both encroached and non‐encroached sampling plots, species richness varied from three to six species 0·25 m⁻². Overall, herbaceous species richness and abundance, in relation to grazing gradient, might disclose a better picture of the effect of grazing on individual herbaceous species. As species richness seems to decline under heavy grazing intensity, low to intermediate grazing levels may promote and conserve key forage species in savanna grazing lands. Copyright © 2012 John Wiley & Sons, Ltd.     

Multilocus sequence analysis of Vibrionaceae isolated from farmed amberjack and the development of a multiplex PCR assay for the detection of pathogenic species

Since 2011, high mortality rates and symptoms consistent with vibriosis have been observed in farmed amberjack (Seriola dumerili) in Japan. To identify 41 strains isolated from diseased amberjack, a multilocus sequence analysis using nine concatenated genes (ftsZ, gapA, gyrB, mreB, pyrH, recA, rpoA, topA and 16S rRNA) was conducted. Twenty‐seven strains were identified as Vibrio harveyi, suggesting an epidemic of V. harveyi infection in amberjack farms. Other strains were identified as Vibrio anguillarum, Vibrio owensii and Photobacterium damselae subsp. damselae. To develop an efficient diagnostic method for vibriosis in amberjack, a multiplex PCR system was developed to identify V. anguillarum, V. harveyi and P. damselae subsp. damselae. The method successfully discriminated between these three bacterial species, with amplification products of 350 bp for V. anguillarum, 545 bp for V. harveyi and 887 bp for P. damselae subsp. damselae and can be used for diagnosis in aquaculture farms.