Identifying climate refugia for 30 Australian rainforest plant species,from the last glacial maximum to 2070

Landscape Ecology - Climate refugia—areas that remain suitable for species during periods of climate disruption—have played an important role in species persistence over time....     

Cohort analysis on a freshwater fish Osteochilus hasselti C. & V. (Cyprinidae) at Bukit Merah Reservoir,Malaysia

An earlier cohort analysis using catch-at-length data (for the period May 1979–April 1980) on the stock of Osteochilus hasselti C. & V. computes statistics on: (1) the total stock at the start of the cohort (N = 22.7 × 10⁵) (these stock numbers decrease progressively at successive lengths, in a steady state and assuming constant natural mortality rate, M = 2.1); (2) catch numbers in a cohort totalling 780 940 individuals; (3) the exploitation rate of the cohort of E = 0.34, suggesting moderate exploitation of the species at Bukit Merah Reservoir, Malaysia.However, the validity of cohort analysis on a species exploited at a very early age depends on the input value of the variables natural mortality rate (M), fishing mortality rate of terminal largest fish (F_ter), and growth parameters (L_∞, K). Because of the methodological difficulties in estimation and verification of M, F_ter and K values of O. hasselti, a range of values of input variables is adopted for comparison. The effect of the variability of M values (0.5, 1.0, 1.5 and 2.5) on the computation results of smaller size-class fishes N_L is significantly different from that based on M = 2.1, showing a much lower population size.The variability of input values of F_ter (range 0.5–2.5) and K (0.28–2.62) is tested on their effects on the population size of recruits. The combined effect of M and K in the relationship of $\text{M}\text{K}$ ranging from 0.8 to 2.5 is varied to decide the possible values of K. In general, the different input values of M, F_ter and K result in lower estimates of the population size of recruits, N_r This is about 28% lower than N_r = 22.7 × 10⁵ when M = F_ter = 2.1 and K = 1.15. With an inherent computational bias, the population size of N_r = 22.7 × 10⁵ is probably an under-estimate, but it is both reasonable and biologically possible for O. hasselti at Bukit Merah Reservoir, Malaysia, since the input variables are generated from representative length composition data of commercial catches and tagging data.     

新疆野苹果与栽培苹果挥发性香气物质分析

以11种新疆野苹果和5个栽培品种果为试材,采用顶空固相微萃取技术结合气相色谱-质谱(SPME-GC-MS)方法,测定了果实的香气成分及含量,并进行亲缘关系计算和主成分分析,旨在研究新疆野苹果与现有栽培品种在苹果驯化中对香气改良的作用,更好地利用香气资源育种。结果表明:试验共鉴定出6类67种挥发性香气物质,物质的量浓度高于阈值的有19种,其中2-己烯醛等10种为所有苹果共有,苯甲醛等3种为新疆野苹果特有,2-甲基丁酸丁酯等6种为栽培品种特有。经分析‘秦冠’拥有与新疆野苹果最低的相似性以及最高的香气质量。综合表明,新疆野苹果以丰富的遗传多样性以及特有挥发性香气物质,‘秦冠’以优质的香气质量可能成为培育香气丰富和浓郁新品种的较好亲本资源。     

黄瓜叶面喷施硅肥对果实糖分和维生素C积累及相关酶的影响

研究了黄瓜叶面喷施硅肥对其生长、产量、果实糖分、维生素C及相关酶活性和基因表达量的影响。结果表明：叶面喷施硅肥显著促进了黄瓜生长,增加了单株产量,提高了果实中碱性转化酶（NI）、蔗糖磷酸合成酶（SPS）、蔗糖合成酶（SS）及半乳糖内脂脱氢酶（GaILDH）活性,提高了果实果糖、葡萄糖和维生素C含量。其中,1.420 g · L^-1单硅酸处理效应最显著,其果糖、葡萄糖和维生素C含量分别较对照高13.79%、18.08%和75.11%。实时荧光定量PCR分析表明,叶面喷施单硅酸的黄瓜果实碱性转化酶–3（NI-3）、蔗糖磷酸合成酶（SPS）和半乳糖内脂脱氢酶（GaILDH）基因表达量显著提高。     

Multiplex PCR genotyping for five bacterial blight resistance genes applied to marker‐assisted selection in rice (Oryza sativa)

Bacterial blight (BB) is the most economically damaging disease of rice in Asia and other parts of the world. In this study, a multiplex PCR genotyping method was developed to simultaneously identify genotypes of five BB resistance genes, Xa4, xa5, Xa7, xa13 and Xa21. The resistance R alleles were amplified using five functional markers (FMs) to generate amplicons of 217, 103, 179, 381 and 595 bp in IRBB66. Amplicons of 198, 107, 87, 391 and 467 bp corresponded to susceptible alleles in Taiwanese japonica rice cultivars. In backcross breeding programmes, the multiplex PCR assay was integrated into selection from a population using BB resistance donor IRBB66 crossed to rice cultivar ‘Tainung82’. Two plants with homozygosity for Xa4, xa5, Xa7, xa13 and Xa21 were selected from 1100 BC₂F₂ plants. In addition, the five BB resistance genes were also accurately identified in F₂ populations. This multiplex PCR method provides a rapid and efficient method for detecting various BB resistance genes, which will assist in pyramiding genes to improve durability of BB resistance in Taiwanese elite rice cultivars.     

Development of new assessment methods for Acropora coral recruitment using coral settlement devices and holes of marine block

We developed new assessment methods for Acropora coral recruitment using coral settlement devices (CSDs) and holes of a marine block. Both devices were deployed in situ before mass spawning of Acropora corals. The CSDs were sampled after 3–4 months of spawning to measure early recruitment, whereas holes of the marine block were observed underwater or MB was sampled to observe holes after 1 year of spawning to measure the recruitment. By combining the results, we would know the recruitment (visually identified underwater) in reefs, including the amount of early recruitment (identified by stereomicroscopic methods), and the environmental condition of the coral reef. These results would help to predict the future of a reef. Nagura Bay had a high early Acropora recruitment; however, due to competition with algae and sedimentation, the recruitment of juvenile corals was extremely low. The reef would possibly be healthy and sustainable at sites where both the early recruitment and recruitment are high. However, if both are low, the reef will be in a critical condition where urgent restoration will be required.     

Impact of vitronectin concentration and surface properties on the stable propagation of human embryonic stem cells

The standard method for culturing human embryonic stem cells (hESC) uses supporting feeder layers of cells or an undefined substrate, Matrigel(?), which is a basement membrane extracted from murine sarcoma. For stem cell therapeutic applications, a superior alternative would be a defined, artificial surface that is based on immobilized human plasma vitronectin (VN), which is an adhesion-mediating protein. Therefore, VN adsorbed to diverse polymer surfaces was explored for the continuous propagation of hESC. Cells propagated on VN-coated tissue culture polystyrene (TCPS) are karyotypically normal after >10 passages of continuous culture, and are able to differentiate into embryoid bodies containing all three germ layers. Expansion rates and pluripotent marker expression verified that a minimal VN surface density threshold is required on TCPS. Further exploration of adsorbed VN was conducted on polymer substrates with different properties, ranging from hydrophilic to hydrophobic and including cationic and anionic polyelectrolyte coatings. Despite differing surface properties, these substrates adsorbed VN above the required surface density threshold and were capable of supporting hESC expansion for >10 passages. Correlating wettability of the VN-coated surfaces with the response of cultured hESC, higher cell expansion rates and OCT-4 expression levels were found for VN-coated TCPS, which exhibits a water contact angle close to 65°. Importantly, this simple, defined surface matches the performance of the benchmark Matrigel, which is a hydrogel with highly complex composition.     

Bioactive Compounds from Marine Sponges: Fundamentals and Applications

Marine sponges are sessile invertebrates that can be found in temperate, polar and tropical regions. They are known to be major contributors of bioactive compounds, which are discovered in and extracted from the marine environment. The compounds extracted from these sponges are known to exhibit various bioactivities, such as antimicrobial, antitumor and general cytotoxicity. For example, various compounds isolated from Theonella swinhoei have showcased various bioactivities, such as those that are antibacterial, antiviral and antifungal. In this review, we discuss bioactive compounds that have been identified from marine sponges that showcase the ability to act as antibacterial, antiviral, anti-malarial and antifungal agents against human pathogens and fish pathogens in the aquaculture industry. Moreover, the application of such compounds as antimicrobial agents in other veterinary commodities, such as poultry, cattle farming and domesticated cats, is discussed, along with a brief discussion regarding the mode of action of these compounds on the targeted sites in various pathogens. The bioactivity of the compounds discussed in this review is focused mainly on compounds that have been identified between 2000 and 2020 and includes the novel compounds discovered from 2018 to 2021.