Fruit antioxidant capacity and self-incompatibility genotype of Ukrainian sweet cherry (Prunus avium L.) cultivars highlight their breeding prospects

Breeding for higher levels of health-promoting components are among the priorities for many fruit crops. Such an approach requires breeding material displaying great variations in the trait to be improved. Commercial sweet cherry cultivars demonstrate only limited variability in fruit antioxidant parameters and hence this study was carried out to characterize some Ukrainian sweet cherry cultivars for their antioxidant and antiradical capacity and total phenolic and anthocyanin contents. Ukrainian cultivars had significantly higher ferric reducing antioxidant power and total phenolic contents compared with commercial cultivars. Levels of all four parameters varied considerably in the Ukrainian germplasm, with some cultivars having outstanding values. A total of eight different self-incompatibility genotypes were assigned to the 14 accessions tested. Assigning cultivars to the appropriate incompatibility groups allowed the design of parental combinations which may result in new genotypes with enhanced functional properties and other valuable fruit traits. Based on the S-genotypes, parental combinations were proposed to ensure 50 or 100 % self-compatible seedlings in the offspring population. The most perspective Ukrainian cultivars like ‘Dagestanka’ and ‘Kodrinskaya’ also had reasonable fruit weight (over 8 g), high flesh to pit ratio (approx. 18) and soluble solid contents (over 16 %). Our results demonstrated that adequate variation is available in Ukrainian germplasm for improving fruit health benefits in sweet cherry through directed hybridizations.     

Xanthorhodopsin: a proton pump with a light-harvesting carotenoid antenna

Energy transfer from light-harvesting carotenoids to chlorophyll is common in photosynthesis, but such antenna pigments have not been observed in retinal-based ion pumps and photoreceptors. Here we describe xanthorhodopsin, a proton-pumping retinal protein/carotenoid complex in the eubacterium Salinibacter ruber. The wavelength dependence of the rate of pumping and difference absorption spectra measured under a variety of conditions indicate that this protein contains two chromophores, retinal and the carotenoid salinixanthin, in a molar ratio of about 1:1. The two chromophores interact strongly, and light energy absorbed by the carotenoid is transferred to the retinal with a quantum efficiency of approximately 40%. The antenna carotenoid extends the wavelength range of the collection of light for uphill transmembrane proton transport.     

Development of Molecular Tools for Distinguishing Between the Highly Similar Rx1 and Rx2 PVX Extreme Resistance Genes in Tetraploid Potato

The Rx1 and Rx2 are extreme resistance genes, which have been introgressed from different species into potato cultivars and breeding lines. These two genes have a 98% and 96% sequence similarity at the nucleotide as well as at the amino acid level, respectively. Except one extra amino acid in the Rx2 gene, the high variations of the amino acid chain are due to single and double nucleotide variations, which are scattered throughout the coding regions. The high level of sequence similarity makes it complicated to identify these genes and to distinguish them from other highly similar genes, like the Gpa2 or from paralogous sequences by a single polymerase chain reaction (PCR). Here, we report the development of markers for the simple and rapid identification of the Rx1 as well as the Rx2 gene. Further, a multiplex PCR reaction is recommended for the simultaneous detection of both genes in a single reaction. Since these genes reside on different chromosomes, following their inheritance by the multiplex PCR method could help the easy incorporation of both genes into breeding lines. The detection method shown here could be routinely used in marker-assisted selection for Potato virus X extreme resistance and could enhance the effectiveness of potato breeding programs. Besides potato breeding, this method could also be effectively applied to mapping experiments as well as in research studies of resistance.     

Assessment of acid-base status and plasma lactate concentrations in arterial,mixed venous,and portal blood from dogs during experimental hepatic blood inflow occlusion

OBJECTIVE: To determine the effects of extended experimental hepatic blood flow occlusion (ie, portal triad clamping [PTC]) in dogs by measuring acid-base status and plasma lactate concentrations in arterial, mixed venous, and portal blood and evaluating the relationship between metabolic and concurrent hemodynamic changes. ANIMALS: 6 healthy Beagles. PROCEDURE: During anesthesia with isoflurane, cardiac output and arterial blood pressure were measured. Arterial, mixed venous, and portal blood samples were collected simultaneously for blood gas analyses and plasma lactate measurements before PTC and at 8-minute intervals thereafter. RESULTS: PTC resulted in severe hemodynamic and metabolic alterations. Eight minutes after PTC, significant decreases in cardiac index from a baseline value of 3.40 +/- 0.27 to 1.54 +/- 0.26 L/min/m2 and in mean arterial blood pressure from a baseline value of 74 +/- 6 to 43 +/- 6 mm Hg were recorded. After PTC, results indicative of lactic acidosis were found in portal blood at 16 minutes, in mixed venous at 32 minutes, and in arterial blood at 48 minutes. Significant differences in measured variables were also found between arterial and portal blood samples, between mixed venous and portal blood samples, and between arterial and mixed venous blood samples after PTC, compared with differences at baseline. CONCLUSIONS AND CLINICAL RELEVANCE: Analysis of mixed venous blood is preferable to analysis of arterial blood in the assessment of metabolic derangement. In a clinical setting, occluded portal blood is released to the systemic circulation, and the degree of reperfusion injury may depend on the metabolic status of pooled portal blood.     

Graft-induced variants as a source of novel characteristics in the breeding of pepper (Capsicum annuum L.)

A line with genetic changes that was obtained from selfed seeds of the scion of an intraspecific pepper graft was used as a source of new characteristics in this breeding experiment. Five new variant lines and several sublines were bred by the use of this graft-induced variant strain and two other cultivars. Gradual introduction of the desired quantitative traits and selection resulted in combinations which significantly outperform the parental lines. Our breeding aim was to combine the two-lobed fruit shape that is characteristic for the graft-induced variants with thick pericarp, high sugar content, large fruit size, and significantly reduced or eliminated pungency in the new variants. A bushy plant type, typical for the graft-induced variants could be maintained in some selected sublines. The use of the three different genotypes resulted in many favorable combinations of quantitative traits, and lines were selected with the most valuable new characteristics. However, not all of these expressed the two-lobed fruit apex of the graft-induced variants. Our results reveal that the new characteristics which are induced by grafting are stable, new traits, and can be used as a novel genetic source in the breeding of pepper. This revised version was published online in July 2006 with corrections to the Cover Date.     

Earthquake-caused landslides: a major disturbance to tropical forests

Earthquakes occasionally denude large areas of tropical forest: for example, 54 square kilometers in Panama in 1976 and 130 square kilometers in New Guinea in 1935. Earthquake rates in New Guinea, but not in Panama, are sufficiently high so that substantial areas of disturbed, nonclimax forest may accumulate. In New Guinea, earthquake-caused landslides are as important as tree falls in the disturbance regime.     

Glomalin extraction and measurement

We investigated extraction from soil of glomalin, a glycoprotein produced by arbuscular mycorrhizal fungi, and we examined its measurement. The most commonly used protocols for extracting glomalin require autoclaving of soil in citrate solution, followed by centrifugation to separate the supernatant, and then measurement by either Bradford protein assay or enzyme-linked immunosorbent assay (ELISA). We found that lengthening the time of autoclaving increased easily extractable glomalin extraction. Delay of centrifugation after autoclaving, however, diminished Bradford-reactive substances in the supernatant, suggesting that extracted substances might be reversibly immobilized on soil particles. Surprisingly, increasing the volume of extraction solution did not accelerate extraction of “total glomalin”, but instead, substantially increased the amount extracted. Multiple autoclave cycles nevertheless denature glomalin, which may not be as heat-resistant as thought. Repeated 1-h autoclaving of supernatant diminished both its Bradford-reactive substances (7.3% h^?1) and immunoreactive protein (22% during the first hour and 9.5% h^?1 of the remainder thereafter), although a large initial volume of extractant could reduce the loss of immunoreactive protein. Proteins and polyphenols that survive the extraction process are measured non-specifically by the Bradford assay. When we added other glycoproteins to dry soils, we recovered a maximum 34% bovine serum albumin and 22% bovine mucin, primarily in the first two, 1-h extraction cycles. These added proteins may adhere to soil organic matter and thereby be protected from denaturation. In addressing the endpoint of glomalin extraction, we found that the Michaelis–Menten equation closely fits cumulative glomalin per extraction cycle such that its asymptote provides an objective estimate of total extractable glomalin for a given set of extraction conditions. Additionally, the equation provides a curvature parameter that reflects the soil-specific efficiency of an extraction protocol. Although the soils that we investigated with 7.6% or more soil organic matter had the most asymptotic total glomalin, they were extracted the least efficiently.     

The Study of Physical and Chemical Characteristics of Organo-Clay Complexes of the Chronosequence of Albic Retisols Using Dynamic Light Scattering and Phase Analysis Light Scattering

Eurasian Soil Science - Dynamic light scattering (DLS) and phase analysis light scattering (PALS) have been used to study the physical and chemical characteristics of organo-clay complexes of...     

Potential Dissipation of Atrazine in the Soil Unsaturated Zone: a Comparative Study in Four European Countries

A European-wide project has been undertaken to establish the potential for dissipation of atrazine in the soil subsurface environment. Samples were obtained, avoiding contamination, in four countries (Belgium, Greece, Hungary and UK) and laboratory studies carried out. In order to make comparisons between results from each laboratory, a ring experiment was carried out using common methodology for sampling, extraction and analytical techniques. Subsurface materials from each country were distributed to the other countries. Atrazine dissipation was determined in each country for all materials under the same laboratory conditions. The results of this comparative study showed generally good agreement between all laboratories. Significant potential microbiological dissipation was detected in certain samples. Where differences occurred between laboratories this was attributed to small, spatially heterogeneous microbial populations in the subsurface materials. © 1997 SCI.