Non-genetic factors influencing reproductive traits and calving weight in Saudi camels

Reproductive traits and calving weight were assessed in Saudi camels, and non-genetic factors influencing them were studied using data collected at Al Jouf centre from 1987 to 2009. Age at first conception, age at first calving, open period, calving interval, gestation length and weight at calving of camels averaged 42.3 months, 54.8 months, 10.6 months, 22.6 months, 377.5 days and 591.9 kg, respectively. A mixed model including the camel as a random effect was used to assess the effect of environmental effects on the traits studied. Age at first conception and age at first calving were affected by camel’s birth year. Open period and calving interval were not affected by parity or year of calving. However, camels that calved from October to February had a calving interval of 2.5 months higher than those that calved from March to September. Gestation length was affected by season and year of calving but not by parity or sex of calf. Camels calving from March to September had a gestation length 6.6 days shorter than those calving from October to February. Weight at calving was affected by parity and year of calving but not by season of calving. It was concluded that an improvement in camel reproductive traits is possible both through improving management systems and utilisation of controlled breeding techniques.     

Genetic and nongenetic effects for milk yield and growth traits in Saudi camels

The study was based on a set of 256 records for milk yield at 305 days, 1,899 records of test day yield, and 466 growth records collected at Al Jouf center from 1987 to 2009. Except season of calving, milk yield at 305 days was affected by parity and calving year, whereas test day yield was influenced by parity, calving year, stage of lactation, and test milk day. Only birth year had a significant effect on all growth traits, whereas dam’s parity influenced weights at birth and 3 months, and birth season affected birth weight, weight at 6 months and average daily gain (ADG) 3–6 months. Variance components estimated using an animal model showed that heritability and repeatability estimates for milk yield at 305 days were 0.24 and 0.28, respectively. The corresponding estimates for test day yield were 0.22 and 0.66, respectively. Direct heritabilities were 0.37, 0.50, 0.60, and 0.85 for body weights at birth, 3, 6, and 12 months of age, respectively, and 0.25, 0.37, 0.49, and 0.29 for ADG 0–3, 3–6, 6–12, and 0–12 months, respectively. The annual genetic progress was 0.05 kg for milk yield at 305 days and 0.0003 kg for test day yield. Annual genetic gains during 23 years were 0.050, −0.185, 0.079, and 0.331 kg for body weights, respectively, and −9, −5, −4, and −13 g, for ADG, respectively. It was concluded that it is necessary to set up a field milk and growth recording system in order to collect a large number of records to check these estimates.     

Characterization of a Clavibacter michiganensis subsp. michiganensis population in Israel

Clavibacter michiganensis subsp. michiganensis (Cmm) strains, collected during the last decade from different locations in Israel, were analyzed by macrorestriction pulsed-field gel electrophoresis (PFGE). Fifty-eight strains from Israel and 18 from other sources were differentiated into 11 haplotypes with either VspI or DraI restriction enzymes. The strains from Israel formed four distinct groups among which groups A (16 strains) and B (32 strains) constituted the major clusters. These two groups originated from the Besor region, which is the main area for growing tomatoes under cover. Rep-PCR, with either ERIC or BOX primers, confirmed results obtained by PFGE. PCR with primers based on three genes – ppaA, chpC and tomA – that spanned the pathogenicity island of the reference strain NCPPB382, produced the expected products with the tested pathogenic strains. Plasmid analysis of representative strains revealed different profiles of one or two plasmids. However all the strains, including five non-pathogenic ones, reacted positively in PCR with primers based on celA gene, which resides on the plasmid pCM1 of NCPPB382. Southern hybridization of total DNA with a 3.2-kb BglII-fragment of pCM1 containing the celA gene was positive when carried out with 31 strains, but the size of the reacting band was not always the same as that of pCM1, suggesting that the plasmids carrying celA may differ in size. Comparison between the colonization rates of strain Cmm42 (group A) and of Cmm32 (group B) did not show any significant differences. The high diversity of the Cmm strains, on the one hand, and the presence of two persistent groups in the Besor region, on the other hand, suggests that the primary inoculum originated each year from residual plants in the soil rather than from infested seeds, in spite of extensive control measures taken by the growers in this area.     

Chemical constituents from Gmelina arborea bark and their antioxidant activity

Gmelina arborea Roxb. is a fast-growing species and is known to have been used in traditional Indian medicine. Chemical constituents from the bark have not been reported, although some chemical constituents from part of this plant (heartwood, leaf, and root) are known. In this study, the bark meal was successively extracted with acetone and methanol. Fractionation of the acetone extract with n-hexane, diethyl ether, and ethyl acetate and subsequent chromatographic separation of the fractions led to the isolation of four compounds. The diethyl ether-soluble fraction yielded tyrosol [2-(4-hydroxyphenyl)ethanol] (1); (+)-balanophonin (2), an 8-5′ neolignan, with opposite optical rotation to known (−)-balanophonin; and gmelinol (3), a known lignan. The ethyl acetate-soluble fraction afforded a new phenylethanoid glycoside to the best of our knowledge, which was identified as (−)-p-hydroxyphenylethyl[5′″-O-(3,4-dimethoxycinnamoyl)-β-d-apiofuranosyl(1′" → 6′)]-β-d-glucopyranoside (4). From the methanol extract, two known compounds, 2,6-dimethoxy-p-benzoquinone (5) and 3,4,5-trimethoxyphenol (6), were isolated and identified. The 1,1-diphenyl-2-picrylhydrazyl (DPPH) free radical scavenging assay of the identifi ed compounds indicated that 3,4,5-trimethoxyphenol (6) exhibited moderate activity. Part of this report was presented at the 57th and 58th Annual Meetings of the Japan Wood Research Society, Hiroshima and Tsukuba, August 2007 and March 2008, respectively     

Agricultural factors affecting methane oxidation in arable soil

CH₄ oxidation activity in a sandy soil (Ardoyen) and agricultural practices affecting this oxidation were studied under laboratory conditions. CH₄ oxidation in the soil proved to be a biological process. The instantaneous rate of CH₄ consumption was in the order of 800 mol CH₄ kg^–1 day^–1 (13 mg CH₄ kg^–1 day^–1) provided the soil was treated with ca. 4.0 mmol CH₄ kg^–1 soil. Upon repeated supplies of a higher dose of CH₄, the oxidation was accelerated to a rate of at least 198 mg CH₄ kg^–1 day^–1. Addition of the plant-growth promoting rhizopseudomonad strains Pseudomonas aeruginosa 7NSK2 and Pseudomonas fluorescens ANP15 significantly decreased the CH₄ oxidation by 20 to 30% during a 5-day incubation. However, with further incubation this suppression was no longer detectable. Growing maize plants prevented the suppression of CH₄ oxidation. The numbers of methanotrophic bacteria and fungi increased significantly after the addition of CH₄, but there were no significant shifts in the population of total bacteria and fluorescent pseudomonads. Drying and rewetting of soil for at least 1 day significantly reduced the activity of the indigenous methanotrophs. Upon rewetting, their activity was regained after a lag phase of about 3 days. The herbicide dichlorophenoxy acetic acid (2,4-D) had a strong negative effect on CH₄ oxidation. The application of 5 ppm increased the time for CH₄ removal; at concentrations above 25 ppm 2,4-D CH₄–oxidizing activity was completely hampered. After 3 days of delay, only the treatments with below 25 ppm 2,4-D showed recovery of CH₄–oxidizing activity. This finding suggests that it can be important to include a CH₄–removal bioassay in ecotoxicology studies of the side effects of pesticides. Changes in the native soil pH also affected the CH₄–oxidizing capacity. Permanent inhibition occurred when the soil pH was altered by 2 pH units, and partial inhibition by 1 pH unit change. A rather narrow pH range (5.9–7.7) appeared to allow CH₄ oxidation. Soils pre-incubated with NH ₄ ⁺ had a lower CH₄–removal capacity. Moreover, the nitrification inhibitor 2-chloro-6-trichloromethyl pyridine (nitrapyrin) strongly inhibited CH₄ oxidation. Probably methanotrophs rather than nitrifying microorganisms are mainly responsible for CH₄ removal in the soil studied. It appears that the causal methanotrophs are remarkably sensitive to soil environmental disturbances.