Biomass and Defoliation Tolerance of 12 Populations of Pseudoroegneria spicata at Two Densities

Pseudoroegneria spicata(Pursh.) A. Löve is an important native grass of the rangelands of the Intermountain West, USA and is widely used in this region for restoration applications. High grazing preference, together with high grazing sensitivity, has reduced the abundance of this species, indicating the need for the development of grazing-tolerant plant materials. While a genotype may be defoliation tolerant at low density, e.g., in an experimental setting, an effective grazing-tolerant genotype must also display this trait at higher densities resembling those found in natural and restoration settings. We compared 12 restoration plant materials for response to spring-defoliation at high (25 plants · m^?2) and low (8 plants · m^?2) plant densities in a field experiment. Two consecutive years of spring-defoliation reduced shoot biomass 19% compared to the nonspring-defoliated control, and this reduction was similar for the two densities examined. Two populations, P-3 and Acc:238, were able to compensate for shoot biomass after 2 yr of spring-defoliation, while the remaining 10 populations undercompensated, as is commonly reported for cool-season grasses in arid and semiarid regions. While the association between control and spring-defoliated shoot biomass was marginally positive (R² = 0.26; P < 0.10), we found a stronger negative association (R² = 0.36; P < 0.05) between spring-defoliation tolerance and control shoot-biomass production. This suggests a possible trade-off between growth and defoliation tolerance (calculated as percentage of control biomass) among populations. Of the four commercially available plant materials in our study, the more recent prevariety germplasm, P-7, exhibited higher control shoot biomass and higher spring-defoliation tolerance than the older cultivars, Whitmar and Goldar. Anatone germplasm was intermediate but not statistically different from these other plant materials for these two traits.     

Molecular identification of blast resistance genes in rice landraces from northeastern India

Rice blast disease caused by the fungus Magnaporthe oryzae is one of the most devastating diseases causing huge losses worldwide. In the present study, major blast resistance genes were investigated in landraces originating from northeastern India. Based on phenotypic evaluation, 288 landraces were classified into three distinct groups: resistant (75), moderately resistant (127) and susceptible (86). The genetic frequencies of the 18 major blast resistance genes were between 6.2% and 27.4%, with only two genotypes possessing a maximum of nine blast resistance genes. The cluster and population structure analysis grouped the landraces into two groups. Through principal coordinate analysis, the scatter plots partitioned the resistant and moderately resistant landraces into different groups. Analysis of molecular variance showed maximum (96%) diversity within populations and least (4%) diversity between populations. Association analysis identified six markers, CRG4_2, RM72, tk59-2, pi21_79-3, RM1233 and RM6648, that are significantly associated with blast disease and explained a phenotypic variance of 1.1–6.5%. The associated genes could be used in marker-assisted rice breeding programmes for gene pyramiding to develop rice varietal resistance against blast disease. The present study represents a valuable blast resistance genetic resource that could be used for identification of new R genes, donors for blast resistance, and genomic studies.     

Rice-residue biochar influences phosphorus availability in soil with contrasting P status

ABSTRACT

Thermo-chemical conversion of crop residues to produce biochar is an emerging strategy in the context of sustainable phosphorous (P) use and residue management. An incubation study for 90 d was conducted to investigate the effects of rice-residue biochar (0, 10, 20 and 40 g kg^?1) in combination with inorganic-P (KH₂PO₄) (0, 25 and 50 mg kg^?1) on phosphorous availability in medium- and high-P status soils. Increasing biochar addition rates alone or in combination with inorganic-P resulted in a significant increase in P pools, i.e. plant available P or Olsen-P (from 8 to 132 mg kg^?1 in medium-P and 15 to 160 mg kg^?1 in high-P soils), microbial biomass P and various mineral-bound inorganic-P fractions in the order (Ca-P > organic-P > Al-P > loosely held/soluble-P > Fe-P > reductant soluble-P). Further, lower phosphatase activity (19–50%) with increasing rates of biochar addition in both soils elucidates the ability of biochar to act as a long-term source of available P in the experimental soils. The results demonstrate that rice-residue biochar can directly or indirectly enhance the status of available P in soils and hence can be used as a beneficial amendment to meet the crop P demand.     

Genetic and physiological evidence for the production of N-acyl homoserine lactones by Pseudomonas syringae pv. syringae and other fluorescent plant pathogenic Pseudomonas species

N-acyl homoserine lactones (AHLs) function as cell density (quorum) sensing signals and regulate diverse metabolic processes in several gram negative bacteria. We report that strains of Pseudomonas syringae pvs. syringae (Pss), tabaci and tomato as well as P. corrugata and P. savastanoi produce difussible AHLs that activate the lux operons of Vibrio fischeri or the tra::lacZ fusion of Agrobacterium tumefaciens. In Pss strain B3A, AHL production occurs in cell density dependent manner. Nucleotide sequence and genetic complementation data revealed the presence of ahlI_Pss, a luxI homolog within the Ahl⁺ DNA of Pss strain B3A. The DNA expresses in AHL-deficient strains of P. fluorescens and E. carotovora subsp. carotovora (Ecc), and restores extracellular enzyme production and pathogenicity in the Ecc strain. The derivatives of Pss strains B3A and 301D carrying chromosomal ahlI::lacZ do not produce AHL, but like their wild type parents, produce extracellular protease and the phytotoxin syringomycin as well as elicit the hypersensitive reaction in tobacco leaves. While these strains also produce a basal level of -galactosidase activity, the expression of ahlI::lacZ is substantially stimulated in the presence of multiple copies of the DNA or by the addition of cell-free spent cultures containing AHL. The activation of -galactosidase production occurs with spent cultures of some, but not all Pseudomonas strains which produce AHL as indicated by the Lux and tra::lacZ assays. Pss strains deficient in the global regulatory genes, gacA or lemA, produce very low levels of AHL. Since inactivation of ahlI_Pss eliminates AHL production and since Ahl⁺ Pseudomonas strains carry the homolog of ahlI_Pss, we conclude that ahlI_Pss specifies a key step in AHL biosynthesis and it has been conserved in many plant pathogenic pseudomonads.     

Impact of Endocrine‐Disrupting Chemicals on Reproductive Function in Zebrafish (Danio rerio)

The prevalence of endocrine‐disrupting chemicals (EDCs) in the aquatic environment has been associated with the wide detection of alterations in the development and physiology of vertebrates. Zebrafish, as a model species, has been extensively used in toxicological research. In this review, we focus on recent published evidence of the harmful effects of EDCs on reproductive function in zebrafish, including skewed sex ratio, immature gonads, diminished sexual behaviour, decreased sperm count, reduced spawning and fertilization. These impairments mostly result from disruption to sex‐steroid hormones induced by endocrine disruptors. We also discuss other effects of exposure to EDCs. In EDC exposure research, despite incomplete assessments of altered gonad histopathology and sexual behaviour, these present potential effective biomarkers or pathways for evaluating the reproductive function in zebrafish on EDC exposure. To date, the pernicious effects of some EDCs on the reproductive performance in laboratory zebrafish are well understood; however, similar alterations remain for further determination in wild‐type fish and more kinds of EDCs. More studies should be performed under established scientific regulatory criteria to investigate the impact of EDCs on reproduction in zebrafish. Moreover, further research is required to explain the definite mechanism of sexual differentiation, which helps in understanding the shift of sexual phenotype with EDC exposure.     

Water quality affects SDH activity, protein content and RNA:DNA ratios in fish (Catla catla, Labeo rohita and Oreochromis mossambicus) raised in ponds of a sewage-fed fish farm

The spatial and seasonal variability of the respiratory enzyme succinate dehydrogenase and the protein content were examined in different tissues of fish cultured in three ponds along the effluent gradient of a sewage-fed fish farm. Indian major carp Catla catla (150-230 g) and Labeo rohita (60-190 g) cultured in both the middle and last points of the sewage effluent (stocking pond 1) and (stocking pond 4) and Oreochromis mossambicus (50-160 g), a naturally growing fish of the inlet (facultative pond) and the out let of the sewage effluent (stocking pond 4) were procured every month during the period of January-December, 2005 and were subjected to determination of succinate dehydrogenase activity, total protein, DNA and RNA contents from gill, liver and muscle tissue respectively. The SDH activity of all three test fishes (Catla catla, Labeo rohita and Oreochromis mossambicus) was reduced significantly (ANOVA; P < 0.05) when cultured in SP-4 compared to SP-1 in the case of Catla catla and Labeo rohita and in facultative pond in the case of Oreochromis mossambicus.Conspicuous differences in the SDH activity of fish between the last and first stocking pond or the facultative pond were clearly due to the result of the differences in water quality. There was a direct relationship between SDH activity in gill tissue of any of the fish investigated and ammonia-N concentration of water or water pH. This shows that the respiratory activity of these fishes was strongly affected by the ammonia and pH of water. In other words, this suggests that as the distance from the point source increases, there was a substantial improvement of water quality in the ponds located along the sewage effluent gradient. Evidently, there is a progressive pattern of growth, survival and physiological health of fish and abundance of favorable diversity of food organisms with rich biodiversity.     

Karyomorphological studies of ten strains of Indian mustard (Brassica juncea Coss.)

Summary Karyomorphological studies on ten cultivated strains of Brassica juncea Coss. (Indian mustard) have been made. All of them were found to possess 2n=36 chromosomes and meiotic studies revealed 18 regular bivalents. A great many structural differences between chromosome complements have been recorded. It has been shown that though homogeneous in gross morphology, minute structural differences between the strains are noted in relation to the number of secondary constrictions, the position of primary constrictions as well as the changes in the arm ratio. A histogram of the haploid chromatin complement of the somatic set of ten strains illustrates the differences.     

Metroglyph analysis of Indian and exotic varieties of maize

Summary Metroglyph and index score analysis was carried out with 15 Indian and 15 exotic varieties of maize currently being used in the breeding programme of the Coordinated Maize Improvement Project at the Indian Agricultural Research Institute. It was found that the Indian varieties under study fall into three morphological complexes which differed among themselves. The variability pattern of the second and third Indian complexes resembled that of Mexican and Colombian germ plasm. The variability pattern of the Caribbean germ plasm was different from the Indian complexes. Index score analysis also gave similar results. Previous breeding experiments also confirmed the findings that these varieties might have originated from a few Mexican or Colombian introductions.     

Molecular mapping of a locus controlling resistance to Albugo candida in Indian mustard

Brassica juncea (L.) Czern & Coss is widely grown as an oilseed crop in the Indian subcontinent. White rust disease caused by Albugo candida (Pers.) Kuntze is a serious disease of this crop causing considerable yield loss every year. The present study was undertaken to identify molecular markers for the locus controlling white rust resistance in a mustard accession, BEC‐144, using a set of 94 recombinant inbred lines (RILs). The screening of individual RILs using an isolate highly virulent on the popular Indian cultivar ‘Varuna’ revealed the presence of a major locus for rust resistance in BEC‐144. Based on screening of 186 decamer primers employing bulked segregant analysis (BSA), 11 random amplified polymorphic DNA markers were identified, which distinguished the parental lines and the bulks. Five of these markers showed linkage with the rust resistance locus. Two markers, OPN0_l000 and OPB06₁₀₀₀, were linked in coupling and repulsion phases at 9.9 cM and 5.5 cM, respectively, on either side of the locus. The presence of only two double recombinants in a population of 94 RILs suggested that the simultaneous use of both markers would ensure efficient transfer of the target gene in mustard breeding programmes.