Large‐scale patterns of fish diversity and assemblage structure in the longest tropical river in Asia

Although the Mekong River is one of the world's 35 biodiversity hot spots, the large‐scale patterns of fish diversity and assemblage structure remain poorly addressed. This study aimed to investigate the fish distribution patterns in the Lower Mekong River (LMR) and to identify their environmental determinants. Daily fish catch data (i.e. from December 2000 to November 2001) at 38 sites distributed along the LMR were related to 15 physicochemical and 19 climatic variables. As a result, four different clusters were defined according to the similarity in assemblage composition and 80 indicator species were identified. While fish species richness was highest in the Mekong delta and lowest in the upper part of the LMR, the diversity index was highest in the middle part of the LMR and lowest in the delta. We found that fish assemblages changed along the environmental gradients and that the main drivers affecting the fish assemblage structure were the seasonal variation of temperature, precipitation, dissolved oxygen, pH and total phosphorus. Specifically, upstream assemblages were characterised by cyprinids and Pangasius catfish, well suited to low temperature, high dissolved oxygen and high pH. Fish assemblages in the delta were dominated by perch‐like fish and clupeids, more tolerant to high temperatures, and high levels of nutrients (nitrates and total phosphorus) and salinity. Overall, the patterns were consistent between seasons. Our study contributes to establishing the first holistic fish community study in the LMR.     

Optimization of carbon stock models to local conditions using farmers' soil tests: A case study with AMGv2 for a cereal plain in central France

Soil organic carbon (SOC) is associated with environmental benefits and crop productivity; therefore, monitoring of SOC stocks is important when assessing the sustainability of agricultural systems. This study applied a hybrid method and the results of on-farm soil tests to calibrate the AMGv2 model and adapt it to local conditions. The method was applied to soils in the Limagne plain (France), which shifted to cereal production since the 1960s. Based on analysing 988 soil test data, covering the period from 1954 to 2019, it was found that SOC stocks showed a significant decrease in the three main soil types of the study area. An optimization procedure estimated that the initial ratios of stable to total carbon fall in the ranges 0.42 and 0.46 for vertisols, 0.48 and 0.52 for calcisols, and 0.56 and 0.60 for fluvisols. Simulations using these values estimated that SOC stocks declined between 1960 and 2018 by between −31 and −17%, depending on soil type. The optimized model was used to forecast the evolution of SOC stocks up to 2050. These simulations showed a further decline in SOC stocks with continuation of current practices, even assuming a 15% increase in crop yields. They indicated that stopping straw exports would stabilize stocks, while a systematic introduction of cover crops would increase stocks about 3.8% over the period considered. It is concluded that this hybrid procedure can improve the adaptation of predictive models to local conditions.     

基于EST-SSR和SNP标记的大麦麦芽纯度检测

大麦麦芽作为啤酒酿造的主要原料之一,其纯度决定了麦芽原料的均一性,进而影响加工工艺和啤酒品质。为高效准确地鉴定麦芽纯度,在啤酒企业进行麦芽原料采购和质量监测时提供参考依据。本研究分别利用EST-SSR和SNP标记定性检测了按比例预混的麦芽样品纯度,并利用SNP标记定量检测了4份送检的麦芽盲样纯度。结果表明,EST-SSR标记能定性检测混杂度高于10%的麦芽样品,而SNP标记能够有效鉴定混杂度低至5%的麦芽样品。SNP标记对纯度定量检测的单次抽样的测定值与真实值之间的误差在3%以内。比较发现,本研究所用的两类分子标记均可用于麦芽样品的纯度检测,但基于KASP技术的SNP标记可以满足麦芽纯度的快速定量检测需要。     

Treatment of pigs with enrofloxacin via different oral dosage forms – environmental contaminations and resistance development of Escherichia coli

BackgroundAntibacterial agents play important roles in the treatment of bacterial infections. However, the development of antimicrobial resistance (AMR) and carry-over of substances into the environment are several problems arising during oral treatment of bacterial infections. We assessed AMR development in commensal Escherichia coli (E. coli) in enrofloxacin treated and untreated animals. In addition, we examined fluoroquinolone in the plasma and urine of treated and untreated animals, and in sedimentation dust and aerosol.MethodsIn each trial, six pigs were treated with enrofloxacin via powder, granulate or pellet forms in two time periods (days 1–5 and 22–26). Four pigs served as untreated controls. The minimum inhibitory concentration (MIC) was determined to evaluate AMR development. Analysis of enro- and ciprofloxacin was performed with high performance liquid chromatography.ResultsNon-wildtype E. coli (MIC > 0.125 µg/mL) was detected in the pellet treated group after the first treatment period, whereas in the other groups, non-wildtype isolates were found after the second treatment period. E. coli with MIC > 4 µg/mL was found in only the pellet trial. Untreated animals showed similar susceptibility shifts several days later. Bioavailability differed among the treatment forms (granulate > pellet > powder). Enro- and ciprofloxacin were detected in aerosols and sedimentation dust (granulate, powder > pellet).ConclusionsThis study indicates that the kind of the oral dosage form of antibiotics affects environmental contamination and AMR development in commensal E. coli in treated and untreated pigs.     

Relation between soil organic matter and yield levels of nonlegume crops in organic and conventional farming systems

The aim of this study was to evaluate the interaction between yield levels of nonleguminous crops and soil organic matter (SOM) under the specific conditions of organic and conventional farming, respectively, and to identify implications for SOM management in arable farming considering the farming system (organic vs. conventional). For that purpose, correlations between yield levels of nonlegume crops and actual SOM level (C_org, N_t, C_hwe, N_hwe) as well as SOM‐level development were examined including primary data from selected treatments of seven long‐term field experiments in Germany and Switzerland. Yield levels of nonlegume crops were positively correlated with SOM levels, but the correlation was significant only under conditions of organic farming, and not with conventional farming treatments. While absolute SOM levels had a positive impact on yield levels of nonlegumes, the yield levels of nonlegumes and SOM‐level development over time correlated negatively. Due to an increased demand of N from SOM mineralization, higher yield levels of nonlegumes obviously indicate an increased demand for OM supply to maintain SOM levels. Since this observation is highly significant for farming without mineral‐N fertilization but not for farming with such fertilization, we conclude that the demand of SOM‐level maintenance or enhancement and thus adequate SOM management is highly relevant for crop production in organic farming both from an agronomical and ecological point of view. Under conventional management, the agronomic relevance of SOM with regard to nutrient supply is much lower than under organic management. However, it has to be considered that we excluded other possible benefits of SOM in our survey that may be highly relevant for conventional farming as well.     

Strip-till as a means of decreasing spatial variability of winter barley within a field scale

The tillage system, which joins soil tillage, fertilisation, and seed sowing in one pass of a machine, is rarely used in cereal cultivation. This research aimed to study whether strip-till and conventional tillage (post-harvest ripping and mixing of stubble, ploughing, pre-sowing fertilisation, and seedbed preparation) differ in plant density, yield components, and grain yield of winter barley cultivated on Cambisol in a region with low rainfall, the annual average is about 500?mm. To reach this aim, a two-year, large-plot experiment was conducted in a production field. The soil within the field was spatially variable in texture, moisture, and chemical and biological properties, CV 2.3% do 29.6%. Strip-till had lower within-field spatial variability of winter barley grain yield than conventional tillage. The standard deviation was 0.36?t?ha^?1, 0.67?t?ha^?1 in the first year and 0.12?t?ha^?1, 0.30?t?ha^?1 in the second year, respectively. During the period of limited rainfall, strip-till had greater uniformity of plants after emergence; after the winter with low air temperature and a low amount of snow, it had greater plant density. Thus, strip-till can reduce variability of plants and their yield within a field, especially in adverse environmental conditions.     

Using the soil gas radon as an indicator for ground contamination by non-aqueous phase-liquids

1 The Problem  One of the major problems facing risk assessment at polluted industrial sites and military bases is subsurface contamination by non-aqueous phase-liquids (NAPLs), since tracing the extent of a NAPL plume using conventional methods (drive point profiling) is usually associated with difficulties. In an effort to trace subsurface contamination as precisely as possible, monitoring points are placed in the area that might be affected by contaminants, and groundwater and soil samples are taken to the laboratory for analysis. However, the final number of monitoring points is hardly ever sufficient for distinctive contamination mapping, and this may ultimately result in an unsuitable remediation action being taken. 2 Objectives  To obtain a more detailed image of a subsurface NAPL plume and, hence, to facilitate remediation measures that are best suited for the site in question, a denser network of monitoring points is desirable. The aim of the investigation described in this paper was therefore to develop a new detection method for subsurface NAPL contamination, which is based on an easily accessibleindicator for NAPLs rather than on the analysis of soil and groundwater samples taken at the site. Based on the good solubility of radon in NAPLs, the idea was put forward that subsurface NAPL contamination should have an influence on the natural radon concentration of the soil gas. Provided this effect is significant, it would be possible to carry out a straightforward radon survey on an appropriate sampling grid covering the suspected site and thus enabling the NAPL contamination to be detected by the localization of anomalous low radon concentrations in the soil. The overall aim of the investigation was to assess the general suitability of the soil-gas radon concentration as an indirect tracer for NAPL contamination in the ground. 3 Methods  The partitioning coefficient K_NAPL/air is one of the most influential parameters governing the decrease of the radon concentration in the soil gas in the presence of a subsurface NAPL contamination. Since NAPL mixtures such as gasoline, diesel fuel and paraffin are among the most important NAPLs regarding remediation activities, laboratory experiments were performed to determine the radon-partitioning coefficient for these three NAPL mixtures. Field experiments were carried out as well. The aim of the field experiments was to test the use of the soil-gas radon concentration as a tracer for NAPL contamination on-site. For the field experiments, each site was covered with a suitable grid of soil gas sampling points. Finally, the lateral radon distribution pattern achieved on each of the sites was compared to the respective findings of the earlier research performed by conventional means. 4 Results and Discussion  The results of the laboratory experiments clearly show a very strong affinity of radon to the NAPL mixtures examined. The partitioning coefficients achieved correspond to those published for pure NAPLs (Clever 1979) and are thus in the expected range. The results of the field experiments showed that the minimum radon concentrations detected match the respective NAPL plumes traced previously. 5 Conclusions  Both the results of the lab experiments and the on-site findings demonstrate that the soil-gas radon concentration can be used as an indicator for subsurface NAPL contamination. The investigation showed that NAPL-contaminated soil volumes give rise to anomalous low soil-gas radon concentrations in the close vicinity of the contamination. The reason for this decrease in the soil-gas radon concentration is the good solubility of radon in NAPLs, which enables the NAPLs to accumulate and ‘trap’ part of the radon available in the soil pores. 6 Recommendations and Outlook  Further research is required into contamination with rather volatile NAPLs such as BTEX. Further research is also needed to examine whether it is possible to not only localize a NAPL plume, but also to obtain some quantitative information about the subsurface NAPL contamination. The authors also believe that additional investigations should be carried out to study the ability of the method to not just localize a NAPL contamination, but also to monitor on-site, clean-up measures.