Structure of tracheal cytotoxin in complex with a heterodimeric pattern-recognition receptor

Tracheal cytotoxin (TCT), a naturally occurring fragment of Gram-negative peptidoglycan, is a potent elicitor of innate immune responses in Drosophila. It induces the heterodimerization of its recognition receptors, the peptidoglycan recognition proteins (PGRPs) LCa and LCx, which activates the immune deficiency pathway. The crystal structure at 2.1 angstrom resolution of TCT in complex with the ectodomains of PGRP-LCa and PGRP-LCx shows that TCT is bound to and presented by the LCx ectodomain for recognition by the LCa ectodomain; the latter lacks a canonical peptidoglycan-docking groove conserved in other PGRPs. The interface, revealed in atomic detail, between TCT and the receptor complex highlights the importance of the anhydro-containing disaccharide in bridging the two ectodomains together and the critical role of diaminopimelic acid as the specificity determinant for PGRP interaction.     

Allelochemicals released in soil following incorporation of rapeseed (Brassica napus) green manures.

Plant-derived allelochemicals such as those produced by glucosinolate hydrolysis in Brassica napus, or rapeseed, are viable alternatives to synthetic compounds for the control of soil-borne plant pests. However, allelochemical production and residence times in field soils have not been determined. Soil samples were taken at 0-7.5 and 7.5-15 cm during a period of 3 weeks following plow-down of two winter rapeseed cultivars (Humus and Dwarf Essex). Soil samples were extracted with dichloromethane and analyzed using gas chromatography. Nine glucosinolate degradation products were identified-five isothiocyanates, three nitriles, and one oxazolidinethione. Maximum concentrations were observed 30 h after plow-down. Compounds derived from 2-phenylethyl glucosinolate, the principal glucosinolate in rapeseed roots, dominated the profile of degradation products. Shoot glucosinolates left few traces. This indicates that rapeseed roots may be a more important source of toxic fumigants than above-ground parts of the plant.     

Agroforestry and organic agriculture

Current conventional agriculture is considered unsustainable and inadequate to address great societal challenges such as climate change, environmental pollution, food security, dependence on fossil energy as well as the decline of natural resources and biodiversity. Many of these problems are related to agricultural specialization (i.e. monoculture) and the consequent simplification of the agroecosystem. In this respect, efforts aimed at improving individual agronomic techniques and at increasing the use-efficiency of external inputs (e.g. synthetic inputs, fossil fuels), without modifying the structure and functions of the whole system, appear to be insufficient to achieve sustainability in most conventional and intensive farming systems. Current organic farming systems adopting the so-called input substitution approach remain intensive and highly specialized and not necessarily able to significantly improve their sustainability. This would require system diversification and redesign of the agroecosystem to increase the spatial and temporal diversification of all its components and promote positive ecological relationships between them. Agroforestry is an agricultural approach based on the diversification of the agroecosystem production components (woody perennials, such as trees or shrubs, plus crops and/or livestock) and on the intensification of the agroecological relationships between these components. As such, it has transformative potential, providing an opportunity for increasing the sustainability of organic farming. In this article we review how the adoption of agroforestry practices could contribute to increasing sustainability in organic farming, and discuss the challenges and opportunities of this adoption.

     

Immunogenicity and role of size: response of guinea pigs to oligotyrosine and tyrosine derivatives

Guinea pigs injected with 100 micrograms of p-azobenzenearsonate derivatives of hexa-L-tyrosine, tri-L-tyrosine, or N-acetyl-L-tyrosine amide, in complete Freund's adjuvant, developed, after 10 to 19 days, delayed-type hypersensitivity to these substances. This was shown by skin reactions, followed by the formation of circulating antibodies that were detectable by passive cutaneous anaphylaxis. Experiments with p-azobenzenearsonate-hexa-L-tyrosine labeledwith iodine-131 showed that this substance was bound in vitro to proteins of normal guinea pig serum. Binding was similar with the nonantigenic hexa-L-tyrosine and its p-azobenzoate derivative.     

Ionic thiocyanate (SCN(-)) production, fate, and phytotoxicity in soil amended with Brassicaceae seed meals

Brassicaceae seed meals produce ionic thiocyanate (SCN (-)), a bioherbicidal compound. This study determined the fate of SCN (-) in a field soil amended with seed meals of Sinapis alba, Brassica juncea, and Brassica napus and quantified crop phytotoxicity by monitoring carrot ( Daucus carota) emergence. Meals were applied at 1 or 2 t ha (-1), and soils were sampled to 35 cm for SCN (-). Maximum SCN (-) (211 micromol kg (-1) of soil) was measured at 5 days in 0-5 cm samples from plots amended with S. alba meal at 2 t ha (-1). Less than 30 micromol of SCN (-) kg (-1) of soil was measured at soil depths below 15 cm. At 44 days, SCN (-) was <15 micromol kg (-1) of soil in all treatments. Emergence inhibition of carrots seeded 15-36 days after meal amendment was found only in S. alba treatments. The rapid decrease of SCN (-) concentrations in Brassicaceae meal-amended soil indicates limited potential for off-site environmental impacts.     

Ionic thiocyanate (SCN-) production from 4-hydroxybenzyl glucosinolate contained in Sinapis alba seed meal

Meal produced from Sinapis alba seed by crushing to remove oil contains a glucosinolate that when hydrolyzed produces phytotoxic allelochemicals; however, the responsible compounds and pathways for their production have not been elucidated. S. alba seed meal and partially purified extracts containing 4-hydroxybenzyl glucosinolate were included in experiments to identify and monitor enzymatically released products using GC-MS and HPLC-MS. The initial product, 4-hydroxybenzyl isothiocyanate, was unstable in aqueous media, showing a half-life of 321 min at pH 3.0, decreasing to 6 min at pH 6.5. More alkaline pH values decrease the stability of 4-hydroxybenzyl isothiocyanate by promoting the formation of a proposed quinone that hydrolyzes to SCN-. Measurement of SCN- showed stoichiometric release from S. alba meal at 48 h when buffered at pH values as low as 4.0, demonstrating that SCN- production in soil is not only probable but likely responsible for observed phytoxicity of the meal.