1株利用乳酸的猪源丁酸梭菌的分离鉴定及基因组序列分析

【目的】 研究1株利用乳酸的猪源丁酸梭菌的基因组信息。【方法】 采用厌氧培养法, 通过乳酸分解培养基(LADM)初筛、梭菌增殖培养基(RCM)复筛, 从饲喂乳酸菌发酵饲料的健康仔猪肠道内容物中分离利用乳酸快、丁酸转化率高的菌株, 对所筛选的菌株进行形态鉴定、16S rDNA序列分析、乳酸转化特性试验、基因组重测序和框架图测序, 并对其编码蛋白进行功能注释。【结果】 分离得到1株分离菌LY33, 基于形态和16S rDNA序列分析鉴定为丁酸梭菌。菌株LY33对乳酸具有较好的利用能力, 在生长第6天可将66 mmol的乳酸基本转化完全, 生成17 mmol左右的丁酸。LY33菌株的重测序表明, 其编码基因整体变异较小, 与参考基因组相比, LY33菌株全基因组杂合比率为0.022‰, 单核苷酸多态性(SNP)位点变异总数21 590个(占整个基因组0.4666%), 插入缺失(InDel)突变总和594个(占0.0128%), 不存在拷贝数变异(CNV), 结构变异(SV)注释的变异总数103个(占0.0003%)。突变基因主要为与菌株生长、能量代谢调节、维生素合成(特别是生物素)有关的基因, 分布于2条染色体的多条序列上。LY33菌株框架图测序及其编码基因蛋白的功能注释表明, 其基因组序列长度4 627 127 bp, GC含量28.60%, 含有4 171个基因, 编码区总长度占比84.12%, 参与了糖代谢(carbohydrate metabolism)、膜转运(membrane transport)和氨基酸代谢(amino acid metabolism)等多种代谢途径转化过程, 基因组中抗大环内酯类药物、抗杆菌肽、VanI糖肽抗性基因个数较多。【结论】 本研究从饲喂4%乳酸菌发酵饲料的健康仔猪肠道内容物中分离到1株利用乳酸快、丁酸转化率高的LY33菌株, 经鉴定为丁酸梭菌, 其具有良好的应用前景, 可作为一种新的微生物资源用于微生态制剂产品。     

一株新城疫病毒弱毒株的分离鉴定

于１９９６年８月从长春地区－－养鸡场分离到一株新城疫病毒,该毒株经过鸡胚传代培养,病毒形态学观察,血凝谱测定、鸡胚平均致死时间试验、鸡脑内致病指数试验、脉致病指数试验及１入毒试验等生物学特性结果表明该新城商株为弱毒株。     

基于反相高效液相色谱技术测定市售羊乳粉中蛋白

为鉴别及检测不同地区市售羊乳粉的品质,基于反相高效液相色谱(reversed-phase high performance liquid chromatography,RP-HPLC)技术,将35种市售羊乳粉根据陕西地区和非陕西地区、纯羊乳粉和配方羊乳粉进行分类与检测,研究不同产地、不同种类羊乳粉的差异,对羊乳粉品质进行分析判别。结果表明：对市售羊乳粉乳蛋白进行RP-HPLC测定发现,配方羊乳粉α_s2-酪蛋白(α_s2-casein,α_s2-CN)和β-CN相对含量分别低于纯羊乳粉20%和24%,κ-CN和乳清蛋白相对含量分别高于纯羊乳粉30%和50%;不同地区纯羊乳粉乳蛋白组成及含量相似。因此,通过RP-HPLC可以实现对市售羊乳粉中乳蛋白的测定和质量评价。     

珍珠鸡源IBDV的分离鉴定及其卵黄抗体的制备

从一群发病的珍珠鸡中分离到1株病毒,经鸡胚接种、琼脂扩散试验、PCR快速检测试验和病毒基因序列的测定,证实了所分离的病毒为IBDV。将该病毒制成灭活疫苗,接种开产的蛋鸡制备卵黄抗体。结果显示该卵黄抗体经免疫扩散试验测定抗体效价可达1∶256,符合无菌标准,对雏鸡也没有任何不良反应。临床试验表明:该卵黄抗体对该养殖场珍珠鸡的传染性法氏囊病的治疗有效率达91%、预防有效率达100%。     

Isolation,Identification and Genotyping of Pasteurella multocida from Fowl Cholera

In order to determine the suspected avian cholera pathogen and geneotypes, bacteria isolation technology was used to isolate and culture pathogenic bacteria, the isolated bacteria were identified by traditional methods and molecular biological methods. Geneotyping of the isolated bacteria were determined using PCR technology and gene sequence analysis. The results demonstrated that the isolated bacteria had typical culture characteristics of Pasteurella multocida (Pm),and the morphology of the colony, the characteristics of cell staining, the physiological and biochemical characteristics were consist with Pm; 457 bp fragment was amplified by PCR. Geneotyping results showed that only A primer amplified the target gene fragment of 1 050 bp, sequence analysis also showed that the isolated bacteria shared 97.6% to 100.0% sequence homology with reference strains, and phylogenetic tree analysis showed that the isolated bacteria and A type Pm were in a branch.The experimental results indicated that the isolated bacteria was identified as capsular serotype A of Pm, the results provided reference for the prevention and control of fowl cholera.     

DNA barcoding for identification of cryptic species in the field and existing museum collections: a case study of Aethomys and Micaelamys (Rodentia: Muridae)

DNA barcoding has been proposed as a method for species identification. However, this method has been criticised for its over-reliance on a single mitochondrial gene. In this study, four mitochondrial gene regions and one nuclear gene region were used to investigate their different abilities to identify tissue associated with museum specimens of Aethomys chrysophilus, Aethomys ineptus and Micaelamys namaquensis. Aethomys chrysophilus and the more recently elevated A. ineptus are indistinguishable on morphological grounds; however, their ranges are largely parapatric with only one syntopic locality currently known. All of the mitochondrial gene regions were able to separate M. namaquensis from A. chrysophilus and A. ineptus, but they varied in their abilities to resolve differences between A. chrysophilus and A. ineptus. The sequence results identified a specimen from KwaZulu-Natal that was misclassified and should have been identified as A. ineptus. Seven specimens that had not been reclassified following the elevation of A. ineptus to species level were identified as A. ineptus. Individuals of A. chrysophilus from Malawi could not be classified as either A. chrysophilus or A. ineptus, and may be a hybrid or a new, distinct species. This study indicates that DNA barcoding may be used to separate M. namaquensis from A. chrysophilus and A. ineptus, and although it was not able to separate A. chrysophilus and A. ineptus, it did indicate specimens from Malawi may be a new cryptic species.     

EVALUATION OF MAGNETIC RESONANCE SAFETY OF VETERINARY RADIOFREQUENCY IDENTIFICATION DEVICES AT 1 T

Implants containing metallic components have the potential to become heated or move within the patient while in the magnetic resonance (MR) environment. Despite containing a ferromagnetic core and having been in use for over 20 years, no information is available on the safety of veterinary radiofrequency identification devices during MR examinations. These devices are the most commonly encountered metallic implants in dogs and cats undergoing MR imaging. Three commercial veterinary microchips were evaluated for safety in the MR environment at 1 T. Parameters tested were translational force, torque, heating, artifact production, and function. Translation and torque were larger than that expected from normal activity under normal gravity. No significant heating was observed. Signal void artifacts may affect diagnosis if they are too close to the area of clinical importance. Microchip function was unaffected by routine clinical MR imaging. Capsule formation around devices is a major factor in counteracting translation and torque. Our findings support that is acceptable for patients to undergo MR imaging with this 1 T system following an interval of 3 months postimplantation to allow capsule growth. Because of the complex interactions involved, these observations may not be translatable to MR scanners of different field strength and/or manufacturer. Further safety testing of these and other radiofrequency identification devices is therefore recommended at different field strengths and equipment specifications.     

乳鼠成骨细胞的培养及鉴定

无菌采取5日龄SD大鼠的颅盖骨,用胰蛋白酶预消化后,漂洗,剪碎,再用Ⅱ型胶原酶消化获得成骨细胞。通过倒置相差显微镜观察,并用碱性磷酸酶和矿化结节染色鉴定,利用微量滴定（MTT）法测定一个培养周期的成骨细胞活性分布,探讨一种经济、高效的原代成骨细胞培养方法。倒置相差显微镜形态观察结果显示,未贴壁的细胞呈圆形,贴壁生长的细胞呈不规则梭形、三角形或多角形,单核,有1-3个核仁;碱性磷酸酶和钙化结节染色均呈阳性（阳性率≥98.06%）;MTT法结合形态学观察结果显示,成骨细胞培养至第10 d时活性最强。证实用改良的二次酶消化法能够在短时间内获得大量成骨细胞,且所培养的细胞具有典型的成骨细胞形态和功能。     

三株鸡传染性法氏囊病毒弱毒株的分离与分子鉴定

本试验在江苏省鸡场分离获得3株鸡传染性法氏囊病病毒（IBDV）,采用RT—PCR法扩增VP2基因,将产物克隆入pMD18T载体,经测序,并与IBDV代表株VP2基因的高变区序列进行分析比较。结果显示,3个分离株与超强毒株、强毒株、突变株及弱毒株的核苷酸同源性在89．5％～98．9％之间,与弱毒株Cu-1和疫苗株PBG-98同源性最高,为98．9％;推导出的氨基酸序列与代表性毒株的同源性在98．2％～99．5％之间。其中,七肽区的第三个丝氨酸残基突变为精氨酸或苏氨酸,279和284位氨基酸残基突变为天冬氨酸和苏氨酸,222、294和299位氨基酸残基分别突变为脯氨酸、亮氨酸和天冬氨酸。上述试验表明3株分离株均为临床弱毒株。     

转基因克隆绵羊的亲子鉴定

利用IASG上公布的绵/山羊的11个微卫星标记,鉴定转基因克隆羊与供体细胞系和代孕母羊间的亲子关系。结果表明转基因克隆羊与供体细胞系之间11个微卫星标记的基因型一致,而与代孕母羊基因型差异很大,由此确定转基因克隆羊来源于供体细胞系。