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11.
大花君子兰叶绿体基因组及其特征   总被引:3,自引:0,他引:3  
郑祎  张卉  王钦美  高悦  张志宏  孙玉新 《园艺学报》2020,47(12):2439-2450
采用Illumina MiSeq测序平台对大花君子兰(Clivia miniata)叶片总DNA进行测序,通过组装获得了其叶绿体基因组(cpDNA)全长序列(158 114 bp)。对其cpDNA注释得到135个基因,包含87个蛋白编码基因、40个tRNA基因和8个rRNA基因。采用生物信息学方法对获得的cpDNA进行简单序列重复(SSR)分析和密码子偏好性分析。结果显示:①大花君子兰cpDNA中共有61个SSR位点,其中单核苷酸、二核苷酸、三核苷酸、四核苷酸、五核苷酸和六核苷酸重复数分别为38、9、2、8、3和1个,多数SSR分布在基因间隔区;②大花君子兰cpDNA密码子偏爱以A或U(T)结尾,亮氨酸使用频率最高,半胱氨酸使用频率最低。基于24种植物的cpDNA全长和23种植物的叶绿体ycf2基因序列进行系统发育分析,结果显示大花君子兰与石蒜科植物在同一分支,显示最近的亲缘关系,支持大花君子兰属于石蒜科。基于叶绿体ycf2的系统发育分析结果与基于cpDNA全长的系统发育分析研究结果大部分相同,支持ycf2基因可以代替cpDNA全长用于植物系统发育分析。  相似文献   
12.
抗逆优质丰产棉花新品种的培育及应用是当前棉花生产节水提质增效的关键。‘衡棉1670’是河北省农林科学院旱作农业研究所以中早熟陆地棉品种资源材料‘衡棉210’为母本,以‘衡棉4号’为父本杂交,后代多年南繁北育,经旱棚盐池鉴定选择,在枯黄萎病混生重病地、不防治棉铃虫的高压胁迫下,经过多年连续定向选择育成。其突出表现为抗枯黄萎病、丰产优质、耐盐抗旱节水,适宜在河北省及黄河流域同类生态春播棉区推广种植,2019年8月通过河北省农作物品种审定委员会审定(审定编号为冀审棉20190013)。  相似文献   
13.
The aim of this study was to analyse the association between single-nucleotide polymorphisms within INHA and ACVR2B and litter size in Dazu black goats. In total, twenty-two SNPs were genotyped in 190 individuals by SNaPshot and resequencing. The results showed that three SNPs (SNP_1, SNP_12 and SNP_13 in this study) were detected to have significant additive genetic effect on the recorded goat litter size (p < .05). The SNP_1 (NC_030809.1), a non-synonymous substitution of G for T at chr2-g. 28314990 in the exon 2 of INHA gene (NM_001285606.1), resulted in homozygote 2 (HOM2) contributed 0.25 and heterozygote (HET) contributed 0.12 larger litter than homozygote 1 (HOM1). Meanwhile, SNP_12 (Chr22-g. 11721225 A > T) and SNP_13 (Chr22-g. 11721227 A > C) (NC_030829.1) simultaneously mutated at the first and third position of a triplet AAA (lysine, K) in the exon 4 of ACVR2B gene (XM_018066623.1) had estimated genetic effects of HOM1 (0.00) and HOM2 (0.03) larger than HET (−0.12). In conclusion, one SNPs (chr2-g. 28314990 T > G) within the exon 2 of INHA and two SNPs (Chr22-g. 11721225 A > T and Chr22-g. 11721227 A > C) i n the exon 4 of ACVR2B gene were highly recommended as candidate markers of litter size in Dazu black goats. A large-scale association study to assess the impact of these variants on litter size is still necessary.  相似文献   
14.
为测定致羔羊脑炎粪肠球菌(Enterococcus faecalis)的生长曲线,寻求一种快速而准确的方法测定不同生长时期粪肠球菌数量,并客观评价其毒性强弱及其对小鼠脑组织的影响,试验采用平板菌落计数法和OD-Monitor振荡比浊法(Dλ值法)测定粪肠球菌的生长曲线,探究该菌在合适时间段内的吸光值(D600 nm)与平板菌落计数法测定的活菌数(CFU)的关系。用粪肠球菌感染小鼠,观察记录小鼠的死亡情况,最后采用Karber法计算粪肠球菌感染小鼠的半数致死量(LD50)。用LD50的剂量感染小鼠,及时采集死亡小鼠脑组织,未死亡的小鼠72 h后全部剖杀取脑组织,一部分做涂片染色,制作病理切片,观察病理变化;一部分进行培养,用于PCR方法进行细菌的回收鉴定。结果显示,用两种方法测定此株粪肠球菌的生长曲线基本一致,在2~8 h生长迅速,为对数生长期,8~14 h生长缓慢,为稳定期,14 h之后死亡数增加,进入衰亡期;对12 h粪肠球菌D600 nm与CFU的关系进行探讨,成功建立回归方程:y=20.769x-1.3422,R2=0.997;其感染小鼠的LD50为7.77×1011个活菌。以此剂量感染小鼠,脑组织涂片染色和培养染色,均能看到革兰氏阳性球菌;PCR结果显示,均出现了大小为112 bp的条带。对脑组织进行病理学观察发现该菌可导致脑组织充血、出血、形成微血栓,脑膜充血。通过生长曲线和其D600 nm与CFU关系的建立,可实时监测粪肠球菌数量,为后期更深入研究粪肠球菌穿越血脑屏障的机制奠定重要的理论基础。  相似文献   
15.
l-proline (Pro) is a precursor of ornithine, which is converted into polyamines via ornithine decarboxylase (ODC). Polyamines plays a key role in the proliferation of intestinal epithelial cells. The study investigated the effect of Pro on polyamine metabolism and cell proliferation on porcine enterocytes in vivo and in vitro. Twenty-four Huanjiang mini-pigs were randomly assigned into 1 of 3 groups and fed a basal diet that contained 0.77% alanine (Ala, iso-nitrogenous control), 1% Pro or 1% Pro + 0.0167% α-difluoromethylornithine (DFMO) from d 15 to 70 of gestation. The fetal body weight and number of fetuses per litter were determined, and the small and large intestines were obtained on d 70 ± 1.78 of gestation. The in vitro study was performed in intestinal porcine epithelial (IPEC-J2) cells cultured in Dulbecco''s modified Eagle medium-high glucose (DMEM-H) containing 0 μmol/L Pro, 400 μmol/L Pro, or 400 μmol/L Pro + 10 mmol/L DFMO for 4 d. The results showed that maternal dietary supplementation with 1% Pro increased fetal weight; the protein and DNA concentrations of the fetal small intestine; and mRNA levels for potassium voltage-gated channel, shaker-related subfamily, member 1 (Kv1.1) in the fetal small and large intestines (P < 0.05). Supplementing Pro to either gilts or IPEC-J2 cells increased ODC protein abundances and polyamine concentrations in the fetal intestines and IPEC-J2 cells (P < 0.05). In comparison with the Pro group, the combined administration of Pro and DFMO reduced the expression of ODC protein and spermine concentration in the fetal intestine, as well as the concentrations of putrescine, spermidine and spermine in IPEC-J2 cells (P < 0.05). Meanwhile, the percentage of cells in the S-phase and the mRNA levels of proto-oncogenes c-fos and c-myc were increased in response to Pro supplementation, whereas depletion of cellular polyamines with DFMO increased tumor protein p53 (p53) mRNA levels (P < 0.05). Taken together, dietary supplementation with Pro improved fetal pig growth and intestinal epithelial cell proliferation via enhancing polyamine synthesis.  相似文献   
16.
为了解新疆马疱疹病毒1型(EHV-1)主要毒力基因遗传进化情况并构建TK基因缺失株,本研究以EHV-1 XJ2015株DNA为模板,对其主要毒力基因TK、gI和gE全长进行克隆、测序及生物信息学分析,并扩增TK基因左右重组臂TKL和TKR,构建质粒pUC-TKLR,将扩增后的增强绿色荧光蛋白(EGFP,含有CMV+polyA)插入pUC-TKLR质粒,构建TK基因缺失打靶质粒。TK、gI和gE基因同源性分析结果显示,XJ2015株与国外EHV-1分离株TK、gI和gE基因同源性均较高,分别为99.8%~100.0%、99.6%~100.0%和99.9%~100.0%;与EHV-3分离株同源性均最低,分别为72.9%、59.4%和62.1%;遗传进化分析显示,3个基因均与国外EHV-1同属于一个遗传进化分支,与EHV-9和EHV-4进化关系较近,但与EHV-3进化关系较远,表明XJ2015毒株与国外EHV-1毒株TK、gI、gE基因核苷酸上差异不明显,没有明显的地域性特征,功能基因保守且进化缓慢,同源基因功能相同或相近;经PCR扩增、酶切、测序及转染鉴定,本试验成功构建了用于TK基因缺失的打靶质粒pUC-TKLR-EGFP。通过对EHV-1主要毒力基因的分析及TK基因缺失打靶载体的构建,为新疆地区马鼻肺炎流行病学调查分析、TK基因缺失株的构建提供理论依据。  相似文献   
17.
18.
To investigate the epizootic of swine influenza virus(SIV), 60 nasal swabs were collected from a clinical cases of pig farm in Tai'an City, Shandong Province of China in April 2017. SIV was isolated by inoculating into 10-day-old Special Pathogen Free embryonated eggs and the whole genome was sequenced. An H1N1 subtype SIV was isolated and designated as A/swine/Shandong/TA04/2017(H1N1). Phylogenetic analysis showed that apart from the polymerase A(PA) fragment belonging to the 2009 pandemic H1N1 branch, seven genome segments belonged to avian-like H1N1 influenza virus lineage. The cleavage site sequence of the hemagglutinin(HA) protein was PSIQSR↓G, which is a typical molecular biological characteristic. Five potential N-glycosylation sites(N14, N26, N277, N484 and N543) were found in the HA gene. To further investigate the epidemiology of SIV in this farm, the 995 serum samples were assessed with EAH1N1 2009 pandemic H1N1 and H3 N2 antigens. The results showed that the total positive rate was 65.43%. The positive rates of single virus infection detected by EAH1N1, 2009 pdmH1N1 and H3 N2 for serum HI(Hemagglutination inhibition) were 48.35, 30.85 and 7.47%, respectively. The results showed that SIV in Shandong Province has been reassorted in some segments and the SIV-positive rate was high on the SIV outbreak farm. These data provide evidence of an epizootic of SIV.  相似文献   
19.
采用大田裂区试验,研究了施用锌肥和不同遮阴程度互作对花生生长发育、抗病性及产量的影响。结果表明,与不施锌肥相比,施用锌肥能提高花生不同部位锌含量、增加叶片SPAD值,提高花生叶片中可溶性糖、蛋白质和生长素含量,减少花生病害的发生,平均降低7.1个百分点,花生产量平均增加19.4%。相同施锌水平下,随着遮阴程度的增加,花生不同部位锌的含量和不同生育期叶片SPAD值以及花生叶片中可溶性糖、蛋白质和生长素含量呈增加趋势,花生的发病率比不遮阴对照增加4.8、10.2个百分点,花生产量平均降低16.5%、10.0%。在30%、70%的遮阴条件下,施用锌肥的花生产量比不施锌的分别提高21.1%、25.0%。本试验条件下,施用七水硫酸锌30 kg/hm2,使花生具有较强的抗低温寡照能力及抗病性能,增产显著,可在花生产区推广应用。  相似文献   
20.
The effect of food deprivation on ova transport, hormonal profiles and metabolic changes was studied in 20 crossbred multiparous sows during their second oestrus after weaning. To determine the time of ovulation, transrectal ultrasonographic examination was performed. The sows were divided into 2 groups, one control group (C-group), which was fed according to Swedish standards, and one experimental group (E-group). The E-group sows were deprived of food from the first morning meal after ovulation until slaughter. Blood samples were collected every second hour from about 12 h before expected ovulation in the second oestrus after weaning until slaughter and were analysed for progesterone, prostaglandin F2 alpha-metabolite, insulin, glucose, free fatty acids and triglycerides. All sows were slaughtered approximately 48 h after ovulation and the genital tract was recovered. The isthmic part of the oviduct was divided into 3 equally long segments and flushed separately with phosphate buffered saline (PBS). Uterine horns were also flushed with PBS. A significantly greater number of ova were found in the first and second part of the isthmus in the E-group (p = 0.05) while in the C-group most of the ova were found in the third part of the isthmus or the uterus (p = 0.01). The level of prostaglandin F2 alpha-metabolite was significantly higher in the E-group compared with the C-group. The concentration of progesterone increased in both groups after ovulation but there were no significant differences between the groups. The other blood parameters showed that the food-deprived sows were in a catabolic state. The 48 h period of fasting results, directly or indirectly in an delayed ova transport, which may be due to a delayed relaxation in the smooth circular muscle layer of the isthmus.  相似文献   
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