桃蛀螟对青霉菌侵染苹果的产卵选择与行为趋向反应

为探明桃蛀螟Conogethes punctiferalis偏好于在青霉菌Penicillium侵染的苹果上产卵的特点与机理,从苹果、玉米和柑橘上分离、纯化获得15株青霉菌,通过形态学和rDNA-ITS序列分析鉴定后,以健康苹果为对照,测试不同青霉菌菌株侵染的苹果对桃蛀螟产卵选择的影响,并利用四臂嗅觉仪测试桃蛀螟对青霉菌诱导的苹果挥发物的行为趋向反应。结果表明,15株青霉菌分别属于皮落青霉P. crustosum、橘青霉P. citrinum、苏门答腊青霉P. sumatrense和指状青霉P. digitatum的不同株型;桃蛀螟对其中的12株青霉菌侵染的苹果的产卵选择率均极显著高于健康苹果,尤其对皮落青霉CO5菌株、苏门答腊青霉OR3菌株和指状青霉OR5菌株侵染的苹果的产卵选择率最高,分别达到67.73%、61.50%和68.39%;桃蛀螟对感染皮落青霉CO5菌株和指状青霉OR5菌株的苹果挥发物的选择率分别为31.37%和29.19%,均显著高于对感染橘青霉OR1菌株和苏门答腊青霉OR3菌株的苹果挥发物的选择率18.14%和21.31%,且前二者之间、后二者之间均无显著差异。表明青霉菌可通过影响寄主植物挥发物释放,从而影响桃蛀螟对寄主植物的产卵选择和行为趋向反应。     

基于浑浊度监测山区河流悬浮泥沙含量的试验研究

针对山区河流悬浮泥沙含量监测缺乏实时性的问题,对浑浊度及悬浮泥沙含量进行监测,分析光照强度、流速、颗粒粒径和水体含沙量对浑浊度的影响,建立浑浊度与悬浮泥沙含量的关系模型式。结果表明： 1）光照强度对浑浊度的影响最大,根据二者之间的关系,将光照强度（E）划分为3个区间：E≤6 800 lx、6 800 lx <E≤22 000 lx、E>22 000 lx,对应于3个区间,确定了浑浊度与悬浮泥沙含量的关系模型; 2）水流流速主要影响上层泥沙颗粒的分布,流速为0.16 m/s时测量区域的浑浊度大于流速为0.018 m/s时的浑浊度; 3）泥沙颗粒的粒径大于扬动流速能带动的临界粒径时,其会沉积在渠底,因此,泥沙级配中大于临界粒径的颗粒占比越大,悬浮泥沙含量越小,浑浊度越小; 4）水体含沙量越大,水沙输移过程中携带悬浮泥沙的量也越多,测量区域上层水样的浑浊度越大; 5）采用本研究确定的浑浊度与悬浮泥沙含量的3个关系模型,预测得到的悬浮泥沙含量与实际悬浮泥沙含量的平均相对误差分别为7.22%、10.00%、8.58%。根据在自然条件下不同光照强度区间测得的浑浊度,可以得出该测量区域的悬浮泥沙含量。由于浑浊度可以现场连续、快速测得,所以将此方法引入山区河流悬浮含沙量实时监测是可行的。     

建兰花叶病毒广东分离物的全基因组序列分析

【目的】建兰花叶病毒(Cymbidium mosaic virus,CymMV)是最主要的兰花病毒病原之一,其广泛传播对兰花产业发展造成严重威胁。探究CymMV遗传信息和进化,为广东省兰花病毒病的监测预警和兰花抗病毒病基因工程提供重要科学依据。【方法】对采自广州地区的墨兰疑似病毒病叶片进行CymMV的RT-PCR及DA-SELISA检测鉴定,利用相关分子生物学软件对CymMV分离物进行基因组序列组装、注释、系统进化及选择压力分析。【结果】首次在广东省发现2个CymMV分离物GZV013和ZC-29,基因组全长均为6227 nt,编码5个功能蛋白;GZV013与台湾分离物M2的核苷酸序列一致性为97.03%;ZC29与南京分离物NJ-1的核苷酸序列一致性为97.11%;CymMV各分离物的全基因组序列一致性为86.85%～98.31%,且多样性种群的分化与寄主种类和地理隔离关系密切;CymMV基因组每个区域均受到负选择的影响,并符合中性进化模型;编码RdRp、TGB1和TGB2的基因在基因组中变异率最高。【结论】GZV013与台湾分离物M2的亲缘关系最近,ZC29与南京分离物NJ-1的亲...     

Should only females of giant freshwater prawn Macrobrachium rosenbergii be selected in genetic improvement programmes?

Sexual dimorphism is widely observed in almost all farmed aquatic animal species but giant freshwater pawn (GFP) is unique, with males characterized by three main morphotypes (blue claw, orange claw and small males) and females by different reproduction status (ovary, berried egg and already‐spawned females). There has been reported evidence that the effect of male morphotype may have masked genetic variation in growth‐related traits, as a result the heritability for male body weight was lower than that estimated in female. A pending question has arisen whether selection should be made in female only. To answer this question, we used an 8‐year data set from a long‐term selection programme (2008–2015) for high growth in this species comprising 106,756 individuals that were offspring of 515 sires and 810 dams. The body weight data of female and male GFP or of each morphotype was treated as a separate trait and a multi‐trait approach was used to estimate genetic correlations for homologous traits between sexes and between morphotypes. Our analysis showed that there were little differences in the heritability estimates between female and male. In female, mature ovary individual displayed higher heritability than berried egg and already‐spawned females. For male, the heritability for blue claw, orange claw and small males were 0.11, 0.06 and 0.00 respectively. Between‐sex genetic correlation was moderate (0.55 ± 0.11) for body weight, suggesting that the trait expressions in female and male may be genetically different. In female, the genetic correlations for body weight among three female types were close to one (0.91–0.94). In contrast, the genetic correlations for body weight between male morphotypes especially between blue claw or orange claw and small males were low (0.15–0.25). Furthermore, we estimated genetic gain as the difference in least square means (LSM) or estimated breeding values (EBV) between the selection line and control group. The genetic gain in body weight was smaller in females than in males. It is concluded that there is no need to run separate breeding programme for female and male GFP. A combined selection using both female and male data can achieve selection response for body weight as demonstrated in the present study.     

A comparison of the population genetics of Lethrinus miniatus and Lutjanus sebae from the east and west coasts of Australia: Evidence for panmixia and isolation

Lethrinus miniatus and Lutjanus sebae are important commercial and recreational species of reef fish. Within Australian waters the former species is less widespread than the latter and has a discontinuous distribution, whilst the latter is continuously distributed in tropical Australian waters. The demographic attributes of these species (e.g. long life span, low rates of natural mortality) make them vulnerable to over-exploitation. Consequently, conservative harvest strategies including no-take zones for these species have been adopted by fisheries management agencies to control exploitation. Information on the genetic stock structure of these species is important for developing specific management strategies. However, little is known about genetic stock structures within and between east and west Australian populations of these species. The current study used the mitochondrial genome hypervariable region 1 (HVR1) of the control region to examine variation between two sites from both the east and west Australian coasts for each species. HVR1 for L. sebae did not differ genetically either within or between coasts (F_st < 0.018, p > 0.15) at the sites studied, suggesting a panmictic population structure. Similarly, L. miniatus did not differ significantly between sites sampled within coast. However, the west coast HVR1 for L. miniatus east and west coast populations, were discrete (F_st of at least 0.92, p < 0.0001). The degree of genetic sub-division between east and west coast populations indicates that they should be managed as discrete stocks. Further, when considering both species, the lower genetic (both haplotype and nucleotide) diversity in three of the four sites on the west coast of Australia, indicates that this region is genetically impoverished and neutrality tests suggest that selection is responsible. Consequently, west Australian populations will be less resilient to perturbations (e.g. fishing, climate change) than east Australian populations, which have higher genetic diversity.     

全基因组选择育种策略及在水产动物育种中的应用前景

全基因组选择的概念自2001年由Meuwissen等提出后便引起了动物育种工作者的广泛关注.目前,澳大利亚、新西兰、荷兰、美国的研究小组已经应用该方法进行了优质种牛的选择育种,并取得了很好的效果.此外在鸡和猪的选择育种中也有该方法的应用,但在水产动物选育中尚未见该方法使用的报道.本文对“全基因组选择育种”的概念和提出背景进行了归纳,对全基因组选择育种的优势进行了阐述,并详细介绍了其具体的策略,总结了目前全基因组育种所广泛采用的方法以及取得的成果,旨在为该方法在水产动物育种方面的应用研究提供科学参考.     

Geographical information system (GIS) environmental models for aquaculture development in Sinaloa State,Mexico

This paper describes the use of a geographical information system (GIS) to construct environmental models for land-based aquaculture development in the State of Sinaloa, Mexico. Based on the source data, submodels were created focusing on three different themes: general environmental issues, water resources and water quality. Models enabled multicriteria and multiobjective decision making concerning site selection and location. In assessing site considerations these general models identified wider resource management options and solved conflicts of land allocation and land use between aquaculture and agriculture. Smaller-scale, more specific models enabled more detailed studies on environmental issues.     

Predicting use of habitat patches by spawning horseshoe crabs (Limulus polyphemus) along a complex coastline with field surveys and geospatial analyses

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