全基因组选择育种策略及在水产动物育种中的应用前景

全基因组选择的概念自2001年由Meuwissen等提出后便引起了动物育种工作者的广泛关注.目前,澳大利亚、新西兰、荷兰、美国的研究小组已经应用该方法进行了优质种牛的选择育种,并取得了很好的效果.此外在鸡和猪的选择育种中也有该方法的应用,但在水产动物选育中尚未见该方法使用的报道.本文对“全基因组选择育种”的概念和提出背景进行了归纳,对全基因组选择育种的优势进行了阐述,并详细介绍了其具体的策略,总结了目前全基因组育种所广泛采用的方法以及取得的成果,旨在为该方法在水产动物育种方面的应用研究提供科学参考.     

Incidence of Pathogenic Microorganisms in Aquacultured Rainbow Trout (Oncorhynchus mykiss)

ABSTRACT

Quantitative levels of six known pathogens (Listeria monocytogenes, Clostridium botulinum, Salmonella species, Vibrio cholerae, Yersinia enterocolitica, and Y. pseudotuberculosis) and aerobic plate counts were measured at five aquaculture facilities. The farmed rainbow trout (Oncorhynchus mykiss) and trout fillets were sampled at two different growing seasons to monitor for microbial hazards. Listeria spp. was identified in both whole trout and trout fillets from all five facilities sampled from both growing seasons. Presumptive Clostridium botulinum spores were also identified from all five facilities for both seasons. The growing season did not affect pathogen levels and there was no evidence that any one aquacultural system was superior to the others. Salmonella spp., Vibrio cholerae, and Yersinia spp. were not isolated from any of the trout samples analyzed.     

Photosynthetic suspended-growth systems in aquaculture

Standardized evaluation and rating of biofilters for aquaculture should be assessed in the context of the economic efficiency of ecological services (waste assimilation, nutrient recycling, and internal food production) provided by earthen ponds, and the availability and cost of land, water, and electrical energy resources required to support particular classes of production systems. In photosynthetic suspended-growth systems, water quality control is achieved by a combination of natural and mechanical processes. Natural processes include photosynthesis of oxygen, algal nutrient uptake, coupled nitrification–denitrification, and organic matter oxidation; mechanical processes include aeration and water circulation. Ammonia is controlled by a combination of phytoplankton uptake, nitrification, and immobilization by bacteria. Unlike biofilters for recirculating aquaculture systems, unit processes are combined and are an integral part of the culture unit. The important design and operational considerations for photosynthetic suspended-growth systems include temperature effects, aeration and mixing, quantity and quality of loaded organic matter, and fish water quality tolerance limits. The principle advantages of photosynthetic suspended-growth systems are lower capital costs relative to other recirculating aquaculture systems and increased control over stock management relative to conventional static ponds. The main disadvantage is the relatively low degree of control over water quality and phytoplankton density, metabolism, and community composition relative to other recirculating aquaculture systems. Examples of photosynthetic suspended-growth systems include semi-intensive ponds, intensively aerated outdoor lined ponds, combined intensive–extensive ponds, partitioned aquaculture systems, greenwater tanks, greenwater tanks with solids removal, and greenwater recirculating aquaculture systems.     

伊维菌素在水产养殖中的应用及其水生态风险

伊维菌素是一种广谱抗寄生虫渔药,在国外被广泛用于鲑鱼、海鲷养殖中的海鲺防治.国内主要用于防治淡水鱼养殖中的各种寄生虫病,其在观赏鱼养殖中的应用也日益普遍.综述了目前国内外伊维茵素在水产养殖中的使用现状,并就其水生态风险进行评估.     

硝化细菌浓度及滤料对养殖水中氨氮处理效果的影响

分别研究了不同硝化细菌浓度(0、20、60、120 mL/100 L)和不同微生物滤料(珊瑚石、锅炉煤渣、牡蛎壳)对养殖水中氨氮处理效果的影响。结果显示,添加硝化细菌后,水体中的氨氮浓度呈现下降趋势,在8～12 h出现极低值后,开始上升,但上升速度较慢;随着水体中硝化细菌添加量的增加,水体中的氨氮浓度下降速度加快;水体中亚硝酸氮浓度呈现先上升后下降的趋势,并在4～6 h出现极高值,然后迅速下降,且硝化细菌添加量越高,下降速度越快。硝化细菌对以珊瑚石和锅炉煤渣为滤料的养殖水体中氨氮和亚硝酸氮的处理效果显著优于牡蛎壳,但珊瑚石和锅炉煤渣之间无显著差异。综合试验结果,应急水质处理时,硝化细菌菌剂的添加量以一次60 mL/100 L(或以活菌计数为1.2×109个/100 L)、间隔24 h添加1次为宜;经过脱硫筛选之后的锅炉煤渣可以作为循环水养殖用滤料。     

Seeding nets with neutral spores of the red alga Porphyra umbilicalis (L.) Kützing for use in integrated multi-trophic aquaculture (IMTA)

Nets in traditional Porphyra mariculture are seeded with conchospores derived from the conchocelis phase, and spend a nursery period in culture tanks or calm coastal waters until they reach several centimeters in length. Some species of Porphyra can regenerate the foliose phase directly through asexual reproduction, which suggests that the time, infrastructure, and costs associated with conchocelis culture might be avoided by seeding nets with asexual spores. Here, we present work from a short-term mariculture study using nets seeded with asexual spores (neutral spores) of a native Maine species of Porphyra. Porphyra umbilicalis (L.) Kützing was selected for this proof of concept research because of its reproductive biology, abundance across seasons in Maine, and evidence of its promise as a mariculture crop. We studied the maturation, release, and germination of the neutral spores to develop an appropriate seeding protocol for nets, followed by development of a nursery raceway to provide an easily manipulated environment for the seeded nets. Neutral spores were produced throughout the year on the central Maine coast; however, there was a temporal variability in the number and survival of released neutral spores, depending upon thallus position in the intertidal zone. Small thalli were strictly vegetative, but most thalli reproduced by neutral spores; sexual reproduction was absent. Neutral spores germinated quickly at 10 and 15 °C, but germination was delayed at 5 °C. Unlike some algal zygotes and spores, neutral spores of P. umbilicalis required light to germinate; however, irradiances of 25 and 100 μmol photons m^− 2 s^− 1 were equally sufficient for germination. Rafts of seeded nets were deployed in Cobscook Bay, Maine, at two distances from salmon aquaculture pens and at a control site on a nearby, fallow aquaculture site (no salmon). There was no difference in nitrogen content of harvested thalli; however, both the density and the surface area of harvested thalli were different among the sites. The possible causes of these differences are discussed in the context of potential use of P. umbilicalis in IMTA.     

循环水养殖罗非鱼氮收支及对水质影响的初步研究

为提供实际生产理论依据,改良系统水处理工艺,开展循环水养殖系统中吉富罗非鱼氮收支和对水质情况的初步研究。起始养殖密度8 kg/m3,投饲率2%,系统循环量1 m3/h,总水量0.8 m3。试验期间溶解氧大于6 mg/L,pH 7.0～7.2,水温23～25℃。每周监测水质2～3次,监测指标包括氨氮、亚硝酸盐氮、硝酸盐氮,每2周检测1次水中总氮。用凯氏定氮法测定实验前后饲料、试验鱼体、粪便、悬浮颗粒的氮含量。结果显示,摄食氮有50.00±1.50%转化为生长氮,32.61±1.38%转化为排泄氮,17.39±4.0%转化为粪氮;58%的粪氮为悬浮颗粒物,42%为可沉淀颗粒物。     

Quantification of Flavobacterium psychrophilum in rainbow trout, Oncorhynchus mykiss (Walbaum), tissues by qPCR

A qPCR assay was developed for rapid and sensitive detection of Flavobacterium psychrophilum, the aetiological agent of bacterial cold-water disease and rainbow trout fry syndrome in salmonid fish worldwide. A set of F. psychrophilum-specific primers based on 16S rRNA gene sequences was designed and validated for specific detection and quantification of DNA isolated from representative strains of F. psychrophilum. The qPCR assay exhibited a high specificity for the 16S rRNA gene of F. psychrophilum (from 4 × 10(8) down to 11 copies per reaction) but not for other Flavobacterium species or other bacteria including fish pathogens. This qPCR-based method proved to be useful in the quantification of the F. psychrophilum titre present within organs dissected out from diseased fish. As the F. psychrophilum genome contains six copies of the 16S rRNA gene, we could infer a limit of detection corresponding to two bacteria per reaction, corresponding to 800 bacteria per fish tissue sample, and therefore 20 F. psychrophilum cells mg(-1) of tissue (for sample weighing 40 mg). The qPCR assay reported here could be a useful tool for veterinary diagnostic laboratories to monitor the F. psychrophilum infection level in fish farms.     

工厂化水产养殖水质监测系统

工厂化水产养殖的密度高、风险大,养殖对象对pH、溶解氧、温度、氨氮、亚硝酸盐等水质参数的变化敏感,受影响严重,监测水质参数极为重要。本文针对工厂化水产养殖水质监测特点和需求,研发了工厂化水产养殖水质监测系统。分析研究pH、溶解氧、温度、亚硝酸盐等水质参数的阈值,设计水质监测数据无线采集节点和基于Zigbee的无线监测网络,建立水质监测系统软件平台。结果表明,该系统能够实现工厂化水产养殖水质实时监测,保证生产安全,提高水产养殖生产效率。     

中国湖泊、水库水产增养殖技术的进展

中国湖泊可养面积187万公顷,水库可养面积200万公顷,总共占全国内陆可养水面的70％以上。这些水面既是我国渔业在本世纪末年产量达到1800万吨宏伟目标的潜力与后劲之所在,也是“八·五”期间本行业科技攻关的重点。 湖库资源特点与水产增养殖发展概要 (一)湖库资源特点 湖泊可养面积90％相对集中于平原地区,而水库总数的89.4％分布在长江、珠江和黄河三大流域的丘陵地区,具有良好的分布格局。湖泊面积在50平方公里以下的占总数的98％以上,水库中中小型的占99.6％,另有塘坝63万座,中小型水面有利于采取各种集约化措施。