Construction and evaluation of introgression lines and fine mapping of ehd8 from Jinghong common wild rice (Oryza rufipogon)

Heading date is one of the most important traits in rice and regulated by multiple genes. Common wild rice is the ancestor of Asian cultivated rice and harbours abundant genetic diversity. To use wild rice resource in rice breeding, a set of 154 introgression lines (ILs) covering 93% of the genome of Jinghong common wild rice was constructed in the background 'Teqing', using 208 simple sequence repeat markers evenly distributed on 12 chromosomes. Among the ILs, the line JIL64 displayed late heading independent of photoperiod. Genetic analysis using the two F₂ populations crossed ''Teqing'/JIL64 and JIL64/'Teqing' revealed that late flowering was controlled by a recessive gene on chromosome 8 (designated early heading date 8, ehd8), and ehd8 was fine mapped to the 50‐kb region flanked by markers RM22221 and 64Indel4. Sequencing and qRT‐PCR demonstrated that LOC_Os08g01410 and LOC_Os08g01420 were deleted in JIL64 and may be associated with the late heading of Jinghong common wild rice. These findings lay a practical foundation for characterizing ehd8, and the ILs help to mine genes from Jinghong common wild rice.     

Morphological differences among Raphanus raphanistrum populations and their relationship to related crops

Wild radish (Raphanus raphanistrum) has developed introgressed populations after hybridization with its cultivated counterpart (R. sativus) in California. Hybridization with various Brassica and Sinapis species is also possible. To determine if hybridization is responsible of the genetic diversity of European populations, six wild radish populations with distinct morphological traits were sampled from geographically distant regions in Europe. Plants were cultivated in an oilseed rape field and in insect‐proof cages. Silique and flower morphology, growth, and reproductive traits were measured. The wild radish populations could be discriminated by the morphological traits, but not related to geographic regions. In particular, populations of one region showed wide variability in terms of silique shape and growth behaviour, and small‐sized flowers. Although the origin of morphological diversity in wild radish is unclear, i.e. native or due to gene flow from the cultivated radish or other Brassicaceae, significant morphological divergence was found that could have relevant effects on plant ecology and adaptation.     

Dissecting Genetic Basis of Deep Rooting in Dongxiang Wild Rice

Deep rooting is an important trait in rice drought resistance. Genetic resources of deep-rooting varieties are valuable in breeding of water-saving and drought-resistant rice. In the present study, 234 BC₂F₇ backcross introgression lines were derived from a cross of Dongye 80 (an accession of Dongxiang wild rice as the donor parent) and R974 (an indica restorer line as the recurrent parent). A genetic linkage map containing 1 977 bin markers was constructed by ddRADSeq for QTL analysis. Thirty-one QTLs for four root traits (the number of deep roots, the number of shallow roots, the total number of deep roots and the ratio of deep roots) were assessed on six rice chromosomes in two environments (2020 Shanghai and 2021 Hainan). Two of the QTLs, qDR5.1 and qTR5.2, were located on chromosome 5 in a 70-kb interval. They were detected in both environments. qDR5.1 explained 13.35% of the phenotypic variance in 2020 Shanghai and 12.01% of the phenotypic variance in 2021 Hainan. qTR5.2 accounted for 10.88% and 10.93% of the phenotypic variance, respectively. One QTL (qRDR2.2) for the ratio of deep roots was detected on chromosome 2 in a 210-kb interval and accounted for 6.72% of the phenotypic variance in 2020. The positive effects of these three QTLs were all from Dongxiang wild rice. Furthermore, nine and four putative candidate genes were identified in qRDR2.2 and qDR5.1/qTR5.2, respectively. These findings added to our knowledge of the genetic control of root traits in rice. In addition, this study will facilitate the future isolation of candidate genes of the deep-rooting trait and the utilization of Dongxiang wild rice in the improvement of rice drought resistance.     

基于26个微卫星标记的三江水系草鱼遗传多样性分析

选取26个微卫星标记对来自长江(监利、邗江)、黑龙江、珠江3个水系的4个野生草鱼(Ctenopharyngodon idellus)群体的遗传多样性进行了检测。结果表明,26个微卫星位点均为高度多态位点,草鱼4个地理群体的多态信息含量(PIC)平均值为0.581 3~0.638 6;共检测出141个等位基因,其中有102个为共有等位基因;每个位点有等位基因2~11个,平均等位基因5.46,平均有效等位基因3.455 6。4个地理群体野生草鱼的平均杂合度在0.711 4~0.804 5之间。群体间遗传固定指数(FST)及AMOVA分析表明,群体间遗传分化并不显著(FST=0.031 73)。基于DA遗传距离构建的UPGMA聚类树表明,监利群体与邗江群体这两个长江水系野生地理群体聚为一支,然后与珠江群体聚为一支,黑龙江群体单独聚为一支。长江群体是原始群体。综上所述,三江水系野生草鱼具有较高的遗传多样性,4个群体之间遗传分化并不明显。     

Characterization and pathogenicity of six Cytospora strains causing stem canker of wild apple in the Tianshan Forest,China

Cytospora species are capable of causing destructive cankers of stems belonging to a wide range of woody plant species. In severe cases, cankers may lead to dieback of twigs and branches. Little is known about the Cytospora species causing canker disease of wild apple (Malus sieversii) trees in the Wild Fruit Forest Reserve in Tianshan Forest, Xinjiang Uygur Autonomous Region, China. In this study, six Cytospora isolates belonging to two species were isolated from cankerous lesions of wild apple twigs. Based on multi‐locus phylogenetic analysis using three DNA markers (ITS, tef1‐α and tub2) and morphological characterization, these isolates were identified as Cytospora mali and Cytospora parasitica. Temperature trials (15, 20, 25 and 30°C) showed that the optimal growth temperature for six isolates was 25°C. At a variety of temperatures, C. mali isolates tended to grow faster than isolates of C. parasitica, with the C. mali isolate, EGI1 performing better than others with regard to growth rate. Morphological observations showed that these species exhibited a single locule without conceptacles, and the conidia length was 3–5 μm. In vitro inoculation trials of twigs and leaves of M. sieversii seedlings revealed that the C. mali isolates were highly virulent phytopathogenic fungi, whereas the C. parasitica isolates were less virulent. The isolate EGI1 was the most virulent isolate among the six isolates. This paper presents the first report of pathogenic Cytospora spp. of the M. sieversii Tianshan Wild Fruit Forest Reserve of Yili, Xinjiang in China. It will aid in the understanding of how apple tree cankers are induced and provide disease management guidelines for M. sieversii forest conservation.     

方城县野生木本植物资源调查分析

采取实地调查、采集标本、影像资料、专家鉴定和分类统计等方法对方城县野生木本植物资源进行调查。结果表明:方城县共有野生木本植物60科137属236种,其中裸子植物4科6属7种,被子植物56科131属229种;优势科有蔷薇科等13个科,含66属145种,优势属有悬钩子属等13个属,含65种;野生木本植物中有乔木121种、灌木85种、藤本25种、竹类5种;国家重点保护、珍稀濒危和省级重点保护植物共有18种。     

A survey of antimicrobial resistance in Escherichia coli isolated from wild sika deer (Cervus nippon) in Japan

We examined the antimicrobial susceptibility of 848 Escherichia coli isolates from 237 feces samples of wild sika deer (Cervus nippon) captured between 2016 and 2019 in 39 of the 47 prefectures of Japan. Five of the 237 wild sika deer (2.1%) carried E. coli with resistance to at least one antimicrobial, and all the resistant isolates showed resistance to tetracycline. The resistant isolates contained antimicrobial resistance genes that were similar to those in E. coli derived from humans and farm animals. Although wild sika deer are not currently likely to be a source for the transmission of antimicrobial resistance in Japan, they can potentially mediate antimicrobial resistance spread by coming into contact with humans, animals, and their surroundings.     

盐胁迫下2种樱桃叶片解剖结构的变化

为了筛选耐盐樱桃砧木,用于天津市周边轻度盐碱地区栽培,本试验通过徒手切片的方法,研究了两种樱桃砧木在盐胁迫下的叶片解剖结构变化。结果表明：在盐胁迫下,四川樱桃的叶片增厚了3.99%,大青叶的减少了2.68%;大青叶的表皮层细胞增厚了23.6%,四川樱桃的减少了3.84%;大青叶的角质层增厚3.57%,四川樱桃的减少了18.31%;四川樱桃的栅栏组织层变化不大,大青叶的减少了16.42%;四川樱桃的海绵组织层增厚了31.96%,大青叶的增厚了21.27%;四川樱桃的栅栏组织和海绵组织层厚度的比值变小、减少了29.17%,大青叶的减少了20.80%。盐胁迫使大青叶叶片表皮细胞层变厚,角质层加厚,栅栏组织层变薄,海绵组织层加厚,整个叶片变薄。盐胁迫使四川樱桃表皮细胞层变薄,角质层变薄,海绵组织层加厚,整个叶片变厚。从盐胁迫下的2种樱桃叶片结构的变化综合分析认为大青叶的耐盐性明显高于四川樱桃。     

野外放归大熊猫肠道菌群变化的研究

对四川卧龙中国保护大熊猫研究中心的一只野外放归亚成体大熊猫肠道菌群的组成和季节变化规律进行了研究,同时与其圈养双胞胎兄弟的肠道菌群进行了比较。从放归大熊猫粪便中分离出17种肠道菌,优势菌群为肠杆菌、肠球菌和乳杆菌。与圈养大熊猫相比,放归大熊猫肠道菌群中优势菌群的种类未发生改变,但是肠球菌数量增加,肠杆菌和乳杆菌的数量减少。研究发现放归大熊猫肠道菌群中的肠杆菌和肠球菌的数量随季节变化有较大波动,乳杆菌的数量随季节变化波动不大;而圈养大熊猫三种优势菌的数量随季节变化波动都不大。     

新麦草愈伤组织多倍体诱导与倍性鉴定

以新麦草幼胚形成的胚性愈伤组织为材料,在悬浮培养基中添加不同浓度秋水仙素和1.5%DMSO诱导愈伤组织染色体加倍,并对处理后的愈伤组织再生幼苗进行根尖染色体倍性鉴定。在25℃下用100mg/L秋水仙素和1.5%DMSO处理72h的愈伤组织再生植株,平均加倍细胞比例最大,为53.58%。比较分蘖期加倍幼苗与二倍体幼苗形态差异,结果除分蘖数无显著差异外,四倍体叶片长、宽均显著高于二倍体,与混倍体叶长差异不显著。四倍体新麦草叶片气孔保卫细胞长度比二倍体增加13.52%,差异显著。同时四倍体叶表皮气孔之间距离也显著大于二倍体,混倍体以上气孔特征介于四倍体与二倍体之间。