仿火箭电泳应用于单细胞凝胶电泳技术的优势(摘要)(英文)

[目的]研究仿火箭电泳应用于单细胞凝胶电泳技术,为单细胞凝胶电泳技术寻求另一种可行的电泳方法提供参考。[方法]将仿火箭电泳方法应用于单细胞凝胶电泳技术,检验单细胞水平上的DNA损伤,并与传统的电泳方法比较,分析其优劣势。[结果]在细胞DNA未受损状态下,2种电泳方法所得的结果一致;而在细胞DNA受到损伤时,传统的电泳方法下一些细胞的慧尾发散出现漂移,仿火箭电泳方法得到的慧尾图像集中且未发生偏移。[结论]仿火箭电泳方法较传统的电泳方法存在一定优势。     

不同NSI值脱腥大豆粉凝胶形成性的评价

本文通过水溶大豆粉凝固性试验对几种不同ＮＳＩ值大豆粉凝胶形成性，以考察不同工艺生产的大豆食品中物理添加特性，证明了不同剂量高频处理工艺生产不同ＮＳＩ值大豆粉凝胶形成性情况。同时证明只有ＮＳＩ值＞５０％时，具有良好的凝胶性。     

一种测定龙眼果柄离层纤维素酶活性的方法

介绍一种测定离层纤维素酶活性的新方法—凝胶扩散-组织印迹法.给出了该测定方法的基本原理、流程、步骤及计算方法,并以此方法测定了龙眼果实脱落过程中果柄离层纤维素酶活性的变化.结果表明该方法需要材料少,灵敏度高,纤维素酶活性最低可检出2×10-6U.     

大豆蛋白热变性程度对速溶豆腐花粉凝胶成型的影响

针对速溶豆腐花粉的制备工艺中需要对大豆进行热处理,热处理过程中大豆蛋白的热变性程度对豆腐花粉凝结的凝胶强度与凝结所需的时间具有显著影响,而现在速溶豆腐花粉的工业生产中还没有对豆浆热处理程度较为合适的标准。该文以大豆、大豆分离蛋白(soybean protein isolate,SPI)、大豆球蛋白(glycinin,11S)、β-伴大豆球蛋白(beta-conglycinin,7S)为原料,研究大豆蛋白热变性程度对速溶豆腐花粉凝胶成型的影响。研究表明11S比7S更难发生完全变性,SPI中的7S和11S比单独存在的7S、11S更难发生完全变性。传统制备方式、前热处理后喷雾干燥或冷冻干燥制备方式、先喷雾干燥或冷冻干燥后热处理制备方式对豆腐花凝结成型影响不同,其中传统方式制备的豆腐花凝胶效果最好,先干燥后热处理制备的豆粉凝胶效果比前热处理后干燥的豆粉好,引起豆腐花凝胶强度差异的主要原因是大豆蛋白中7S和11S热变性程度不同。制备同一凝胶强度的豆腐花,热处理温度越低,所需的热处理时间越长;制备高凝胶强度的豆腐花比制备低凝胶强度的豆腐花所能进行的热处理温度与时间范围小。大豆蛋白的7S处于完全变性而11S处于未完全变性的状态时,适合制备速溶豆腐花粉的大豆蛋白变性程度应控制热处理温度与时间范围为80℃时热处理20~65 min,85℃时热处理15~50 min,90℃时热处理10~35 min,95℃时热处理5~20 min。该研究结果为调控速溶豆腐花粉的凝胶特性提供理论依据。     

核桃RAPD扩增产物的不同电泳检测及其序列特点

1.3%琼脂糖凝胶和5%聚丙烯酰胺凝胶电泳对核桃RAPD扩增产物检测的结果表明,5%聚丙烯酰胺凝胶对RAPD扩增产物的分离效果较1.3%琼脂糖凝胶好。根据两者的电泳结果构建了树状聚类图,聚类结果大致相同,两种电泳方法都能正确地反映出品种间的遗传关系。通过挑选20个片段进行克隆,发现20条序列都来自核桃基因组。其中,编码蛋白基因的序列为5条,占所克隆片段的25%。     

双向电泳技术研究及其在农业生物蛋白质组学研究中的应用

双向电泳技术在蛋白质组学研究领域中处于核心地位。从样品制备、第一向等电聚焦电泳及第二向SDS-聚丙烯酰胺凝胶电泳、蛋白检测等关键环节方面对双向电泳技术的研究进展作了详细综述，并简要分析评价了以经典双向电泳为基础发展起来的差异凝胶电泳；同时重点介绍了双向电泳技术在农业生物蛋白质组学研究领域中的应用范围，为进一步开发利用提供参考；最后对双向电泳技术的发展前景作了展望。     

Microbial composition and diversity of an upland red soil under long-term fertilization treatments as revealed by culture-dependent and culture-independent approaches

Background, aim, and scope  Fertilization is an important agricultural practice for increasing crop yields. In order to maintain the soil sustainability, it is important to monitor the effects of fertilizer applications on the shifts of soil microorganisms, which control the cycling of many nutrients in the soil. Here, culture-dependent and culture-independent approaches were used to analyze the soil bacterial and fungal quantities and community structure under seven fertilization treatments, including Control, Manure, Return (harvested peanut straw was returned to the plot), and chemical fertilizers of NPK, NP, NK, and PK. The objective of this study was to examine the effects on soil microbial composition and diversity of long-term organic and chemical fertilizer regimes in a Chinese upland red soil. Materials and methods  Soil samples were collected from a long-term experiment station at Yingtan (28°15′N, 116°55′E), Jiangxi Province of China. The soil samples (0–20 cm) from four individual plots per treatment were collected. The total numbers of culturable bacteria and fungi were determined as colony forming units (CFUs) and selected colonies were identified on agar plates by dilution plate methods. Moreover, soil DNAs were extracted and bacterial 16S rRNA genes and fungal 18S rRNA genes were polymerase chain reaction amplified, and then analyzed by denaturing gradient gel electrophoresis (DGGE), cloning, and sequencing. Results  The organic fertilizers, especially manure, induced the least culturable bacterial CFUs, but the highest bacterial diversity ascertained by DGGE banding patterns. Chemical fertilizers, on the other hand, had less effect on the bacterial composition and diversity, with the NK treatment having the lowest CFUs. For the fungal community, the manure treatment had the largest CFUs but much fewer DGGE bands, also with the NK treatment having the lowest CFUs. The conventional identification of representative bacterial and fungal genera showed that long-term fertilization treatments resulted in differences in soil microbial composition and diversity. In particular, 42.4% of the identified bacterial isolates were classified into members of Arthrobacter. For fungi, Aspergillus, Penicillium, and Mucor were the most prevalent three genera, which accounted for 46.6% of the total identified fungi. The long-term fertilization treatments resulted in different bacterial and fungal compositions ascertained by the culture-dependent and also the culture-independent approaches. Discussion  It was evident that more representative fungal genera appeared in organic treatments than other treatments, indicating that culturable fungi were more sensitive to organic than to chemical fertilizers. A very notable finding was that fungal CFUs appeared maximal in organic manure treatments. This was quite different from the bacterial CFUs in the manure, indicating that bacteria and fungi responded differently to the fertilization. Similar to bacteria, the minimum fungal CFUs were also observed in the NK treatment. This result provided evidence that phosphorus could be a key factor for microorganisms in the soil. Thus, despite the fact that culture-dependent techniques are not ideal for studies of the composition of natural microbial communities when used alone, they provide one of the more useful means of understanding the growth habit, development, and potential function of microorganisms from soil habitats. A combination of culture-dependent and culture-independent approaches is likely to reveal more complete information regarding the composition of soil microbial communities. Conclusions  Long-term fertilization had great effects on the soil bacterial and fungal communities. Organic fertilizer applications induced the least culturable bacterial CFUs but the highest bacterial diversity, while chemical fertilizer applications had less impact on soil bacterial community. The largest fungal CFUs were obtained, but much lower diversity was detected in the manure treatment. The lowest bacterial and also fungal CFUs were observed in the NK treatment. The long-term fertilization treatments resulted in different bacterial and fungal compositions ascertained by the culture-dependent and also the culture-independent approaches. Phosphorus fertilizer could be considered as a key factor to control the microbial CFUs and diversity in this Chinese upland red soil. Recommendations and perspectives  Soil fungi seem to be a more sensitive indicator of soil fertility than soil bacteria. Since the major limitation of molecular methods in soil microbial studies is the lack of discrimination between the living and dead, or active and dormant microorganisms, both culture-dependent and culture-independent methods should be used to appropriately characterize soil microbial diversity.     

Kinetics of the release of dissolved organic matter (DOM) from air‐dried and pre‐moistened soil material

In this study, the kinetics of soil organic matter (SOM) dissolution from soil samples in different states of moisture was investigated, using a continuous extraction method. The investigation distinguished three processes of SOM dissolution. They include an initial, fast process (probably hydrophilic dissolved organic matter) and two slow, rate limited processes, which probably correspond to hydrophobic dissolved organic matter (DOM). The second process indicates a slow, continuous release of DOM, whereas the third process is determined by a power law. The rate of the third process strongly depends on temperature and state of moisture. It is diffusion limited, with the diffusion control probably being located in the solid soil organic matter. This was explained by a gel structure, which slowly forms in the hydrating SOM and allows diffusion of mobile particles of SOM. The results show the importance of considering the moisture state of SOM for the kinetics of DOM dissolution.     

Response of the soil fungal community to multi-factor environmental changes in a temperate forest

Both environmental and climatic changes are known to influence soil microbial biomes in terrestrial ecosystems. However, there are limited data defining the interactive effects of multi-factor environmental disturbances, including N-deposition, precipitation, and air temperature, on soil fungal communities in temperate forests. A 3-year outdoor pot experiment was conducted to examine the temporal shifts of soil fungal communities in a temperate forest following N-addition, precipitation and air temperature changes. The shifts in the structure and composition of soil fungal communities were characterized by denaturing gradient gel electrophoresis and DNA sequencing. N-addition regimen induced significant alterations in the composition of soil fungal communities, and this effect was different at both higher and lower altitudes. The response of the soil fungal community to N-addition was much stronger in precipitation-reduced soils compared to soils experiencing enhanced precipitation. The combined treatment of N-addition and reduced precipitation caused more pronounced changes in the lower altitude versus those in the higher one. Certain fungal species in the subphylum Pezizomycotina and Saccharomycotina distinctively responded to N fertilization and soil water control at both altitudes. Redundancy discrimination analysis showed that changes in environmental factors and soil physicochemical properties explained 43.7% of the total variability in the soil fungal community at this forest ecosystem. Variations in the soil fungal community were significantly related to the altitude, soil temperature, total soil N content (TN) and pH value (P < 0.05). We present evidence for the interactive effects of N-addition, water manipulation and air temperature to reshape soil fungal communities in the temperate forest. Our data could provide new insights into predicting the response of soil micro-ecosystem to climatic changes.