Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by geographic features

Here, we examine soil-borne microbial biogeography as a function of the features that define an American Viticultural Area (AVA), a geographically delimited American wine grape-growing region, defined for its distinguishing features of climate, geology, soils, physical features (topography and water), and elevation. In doing so, we lay a foundation upon which to link the terroir of wine back to the soil-borne microbial communities. The objective of this study is to elucidate the hierarchy of drivers of soil bacterial community structure in wine grape vineyards in Napa Valley, California. We measured differences in the soil bacterial and archaeal community composition and diversity by sequencing the fourth variable region of the small subunit ribosomal RNA gene (16S V4 rDNA). Soil bacterial communities were structured with respect to soil properties and AVA, demonstrating the complexity of soil microbial biogeography at the landscape scale and within the single land-use type. Location and edaphic variables that distinguish AVAs were the strongest explanatory factors for soil microbial community structure. Notably, the relationship with TC and TN of the <53 μm and 53–250 μm soil fractions offers support for the role of bacterial community structure rather than individual taxa on fine soil organic matter content. We reason that AVA, climate, and topography each affect soil microbial communities through their suite of impacts on soil properties. The identification of distinctive soil microbial communities associated with a given AVA lends support to the idea that soil microbial communities form a key in linking wine terroir back to the biotic components of the soil environment, suggesting that the relationship between soil microbial communities and wine terroir should be examined further.     

内蒙古岩画中的动物群落结构及其生态环境的研究——以阴山和乌兰察布两地岩画对比研究为例

动物岩画是内蒙古地区古代动物的图解,通过岩画中的动物群落结构对比,可以推测相同地域范围内,不同时期的动物分布情况,进而推断当地的自然环境变迁的过程。     

Response of the soil fungal community to multi-factor environmental changes in a temperate forest

Both environmental and climatic changes are known to influence soil microbial biomes in terrestrial ecosystems. However, there are limited data defining the interactive effects of multi-factor environmental disturbances, including N-deposition, precipitation, and air temperature, on soil fungal communities in temperate forests. A 3-year outdoor pot experiment was conducted to examine the temporal shifts of soil fungal communities in a temperate forest following N-addition, precipitation and air temperature changes. The shifts in the structure and composition of soil fungal communities were characterized by denaturing gradient gel electrophoresis and DNA sequencing. N-addition regimen induced significant alterations in the composition of soil fungal communities, and this effect was different at both higher and lower altitudes. The response of the soil fungal community to N-addition was much stronger in precipitation-reduced soils compared to soils experiencing enhanced precipitation. The combined treatment of N-addition and reduced precipitation caused more pronounced changes in the lower altitude versus those in the higher one. Certain fungal species in the subphylum Pezizomycotina and Saccharomycotina distinctively responded to N fertilization and soil water control at both altitudes. Redundancy discrimination analysis showed that changes in environmental factors and soil physicochemical properties explained 43.7% of the total variability in the soil fungal community at this forest ecosystem. Variations in the soil fungal community were significantly related to the altitude, soil temperature, total soil N content (TN) and pH value (P < 0.05). We present evidence for the interactive effects of N-addition, water manipulation and air temperature to reshape soil fungal communities in the temperate forest. Our data could provide new insights into predicting the response of soil micro-ecosystem to climatic changes.     

白三叶返园对苹果园土壤微生物群落的影响

为了解苹果(Malus pumila)园中覆盖和埋置白三叶(Trifolium repens)对土壤微生物群落的影响,采用尼龙袋法将新鲜的白三叶覆盖和埋置到苹果园中,分别在白三叶降解1、3、6个月时,利用Biolog微平板法检测土壤微生物群落的功能多样性。结果表明,覆盖和埋置白三叶均可使苹果园土壤微生物代谢活性显著提高(P0.05),微生物的多样性除6个月外显著增加、丰富度显著增加,均匀度显著降低(P0.05),群落结构发生变化,且覆草处理大于埋草,同时,白三叶降解时间的长短也影响土壤微生物群落。土壤微生物群落主成分分析结果显示,不同返园方式间主要对羧酸类碳源的利用有差异,而导致不同降解时间土壤微生物群落代谢差异的主要是糖类。说明在苹果园覆盖和埋置白三叶可改变土壤微生物群落,而覆盖白三叶对微生物群落结构的改善情况显著优于埋置白三叶。     

黄土丘陵区不同管理方式下草地优势种群的生态位

以吴起县杨青川流域草地为研究对象,对封育(Enclosure)、放牧(Grazing)、施肥(Fertilization)、刈割(Clipping)、灭鼠(Deratization)5种管理方式的草地群落进行调查,并运用Levins生态位宽度和Pianka生态位重叠指数对5种管理方式下主要植物种群生态位特征进行分析。结果表明,达乌里胡枝子(Lespedeza davurica)、铁杆蒿(Artemisia sacrorum)、赖草(Leymus secalinus)、猪毛蒿(Artemisia scoparia)和硬质早熟禾(Poa sphondylodes)的种群总生态位宽度较大,封育放牧施肥刈割灭鼠管理模式下,生态位宽度最大的分别是达乌里胡枝子、赖草、紫花地丁(Viola philippica)、达乌里胡枝子和猪毛蒿,生态位宽度值大于4的物种数分别为6、6、3、4和3种。不同管理方式下各种对间的重叠指数平均值由大到小依次封育放牧施肥刈割灭鼠。施肥管理中,种群间生态位宽度与生态位重叠之间存在线性关系,其它管理方式中种群生态位宽度与生态位重叠之间不存在线性关系。生态位分析表明,封育和放牧管理下种群间对资源的需求趋于相同,彼此间通过竞争共存,有利于群落演替,草地生态系统逐渐得到恢复,施肥、刈割、灭鼠管理使群落物种竞争排序发生变化,破坏了草地生态系统原有的竞争机制,导致群落向简单群落演替。从牧草发展角度出发,封育、施肥和刈割有利于优质牧草生长。     

Analysis of Inter-Individual Bacterial Variation in Gut of Cicada Meimuna mongolica (Hemiptera: Cicadidae)

Intestinal bacterial community plays a crucial role in the nutrition, development, survival, and reproduction of insects. When compared with other insects with piercing-sucking mouthparts, the habitats of cicada nymphs and adults are totally different. However, little is known about the differences in the gut bacterial communities in the nymphs and adults within any cicada species. The diversity of bacteria in the gut of nymphs and adults of both genders of Meimuna mongolica (Distant) was studied using the denaturing gradient gel electrophoresis (DGGE) method. Few inter-individual variations among gut microbiota were observed, suggesting that M. mongolica typically harbors a limited and consistent suite of bacterial species. Bacteria in the genera Pseudomonas and Enterobacter were the predominant components of the gut microflora of M. mongolica at all life stages. Bacteria of Pantoea, Streptococcus, and Uruburuella were also widespread in the cicada samples but at relatively lower concentrations. The relative stability and similarity of the PCR-DGGE patterns indicate that all individuals of this cicada species harbor a characteristic bacterial community which is independent from developmental stages and genders. Related endosymbionts that could be harbored in bacteromes of cicadas were not detected in any gut samples, which could be related to the cicada species and the distribution of these endosymbionts in the cicada cavity, or due to some of the possible limitations of PCR-DGGE community profiling. It is worthwhile to further address if related cicada endosymbiont clades distribute in the alimentary canals and other internal organs through diagnostic PCR using group-specific primer sets.     

Responses of soil nematode community structure to soil carbon changes due to different tillage and cover crop management practices over a nine-year period in Kanto,Japan

The response of the soil food web structure to soil quality changes during long-term anthropogenic disturbance due to farming practices has not been well studied. We evaluated the effects of three tillage systems: moldboard plow/rotary harrow (MP), rotary cultivator (RC), and no-tillage (NT), three winter cover-crop types (fallow, FL; rye, RY; and hairy vetch, HV), and two nitrogen fertilization rates (0 and 100 kg N ha⁻¹ for upland rice, and 0 and 20 kg N ha⁻¹ for soybean production) on changes in nematode community structure. Sixty-nine taxa were counted, total nematode abundance (ALL), bacterial feeders (BAC), predators (PRD), omnivores (OMN), and obligatory root feeders (ORF) were more abundant in NT than in MP and RC, but fungal feeders and facultative root feeders (FFR) were more abundant in RC than in NT and MP. Cover crop also influenced nematode community structure; rye and hairy vetch were always higher in ALL, BAC, FFR, ORF, and OMN than fallow. Seasonal changes in nematode community structure were also significant; in particular, as soil carbon increased, nematode abundance also increased. The relationship between nematode indices and soil carbon was significant only in NT, but not in MP and RC. In NT, with increasing soil carbon, enrichment index and structure index (SI) were positive and significant and channel index was negative. Bulk density was significantly negatively correlated with FFR and ORF. Seasonal difference in nematode community between summer and autumn was larger in an upland rice rotation than in a soybean rotation. Over the nine-year experiment, SI increased not only in NT but also in MP and RC, suggesting that repeated similar tillage inversions in agroecosystems may develop nematode community structures adapted to specific soil environmental conditions. Because NT showed the highest values of both SI and soil carbon, the increase of soil carbon in NT is expected to have a great impact on developing a more diverse nematode community structure.     

青海省优良牧草种质资源

青海省天然草地分布广、草地类型多样，草地植物以禾本科、莎草科、豆科、蓼科、藜科等植物为主，且绝大多数植物家畜可食，是一个丰富的优良牧草种质资源库。尤其是莎草科的植物其牧草品质良好，营养成分含量高，极具开发利用的潜力。因此，在积极保护天然草地上极具挖掘潜力的牧草种质资源的基础上，进一步深入研究和合理开发利用优质牧草资源是十分必要的。     

甘肃省天祝县草原补奖政策实施效果

草原作为重要的生态资产与生产资源,在我国生态文明建设和社会经济发展中具有重要的战略地位。党的十八大以来,我国将生态文明建设纳入“五位一体”总体布局之中,在草原牧区实施草原生态补奖政策,对草地生态保护、修复和助力牧区精准脱贫具有重要意义。本研究以甘肃省天祝藏族自治县为例,通过历年统计数据和查阅年鉴等方式获得相关资料,对两轮补奖政策实施效果进行梳理,从补奖政策资金、草地生产力及载畜量、生态效益、经济效益和社会效益等方面分析了政策实施前后变化情况。结果表明：1)两轮补奖政策实施后,天祝县草原生态环境逐步恢复,草地生产力达到2 162.28 kg·hm–2,相比补奖政策实施前提高了45.4%;2)畜牧业生产方式不断转变,理论载畜量增长了42.98万个羊单位,相比补奖政策实施前提高了54.3%;3)农牧民人均收入从补奖政策实施前的4 012元增加到8 265元。遵从“绿水青山就是金山银山”的生态发展理念,为进一步加强草地生态恢复,建议：1)在平衡禁牧下农户收入水平和生态补偿资金投入的基础上确定草原补奖补偿标准;2)加快培育现代农业产业,加大产业扶持力度,积极发展特色农牧业;3)建立健全放牧禁牧制度,科学制定草原合理利用计划。     

抗菌肽粗提物对肉鸡生长性能、粪便微生物菌群结构及经济效益的影响

为分析抗菌肽粗提物对肉鸡生长性能、粪便微生物菌群结构及经济效益的影响,试验选择体重相近的21日龄白羽肉鸡600只,随机分成4组,每组15个重复,每个重复10只,1组为空白对照组饲喂基础日粮,试验2、3、4组在基础日粮中分别添加1.0%、1.5%、2.0%的抗菌肽粗提物,试验期为21 d。结果表明：（1）试验2、3、4组的平均采食均高于1组（P > 0.05）|试验3、4组的平均日增重较1组比分别提高11.0%、9.4%（P ＜ 0.05）,料重比较1组比分别降低18.5%、15.2% （P ＜ 0.05）|（2）试验3、4组粪便中大肠杆菌的含量较1组分别降低14.3%、18.0%（P ＜ 0.05）,试验3、4组粪便中乳酸杆菌、双歧杆菌的含量较1组比分别提高4.6%、6.7%、14.5%、12.3%（P ＜ 0.05）|（3）试验3、4组每只肉鸡经济效益较1组比分别提高19.3%、17.7%。综上,1.5%抗菌肽粗提物添加可以提高白羽肉鸡生长性能,改善粪便微生物菌群结构,提高其经济效益。 [关键词] 抗菌肽粗提物|白羽肉鸡|生长性能|粪便微生物菌群结构|经济效益