我国12个地区草莓叶螨种类分子鉴定及遗传多样性

为明确草莓上的叶螨种类及其遗传多样性,以便准确有效地指导草莓叶螨防治。本研究选取我国12个代表性的地区,采集草莓上的叶螨。采样范围覆盖了我国华北、华中、华东和西南的草莓产区。扩增和测定线粒体cox1基因部分序列,将所获得的序列通过BLAST与GenBank数据库中的序列进行比对,确定叶螨种类,并对cox1基因序列的多样性进行分析。测序获得了长度为632bp的cox1基因片段。BLAST比对结果和系统发育分析表明,来自我国12个地区的91个样品均为二斑叶螨Tetranychus urticae。遗传多样性分析发现我国草莓上二斑叶螨的cox1基因有2种单倍型,其中11个地区仅存在1种单倍型,北京昌平检测到2种单倍型。两种单倍型之间有1个核苷酸的同义突变。本研究表明,二斑叶螨为这些地区草莓上唯一的叶螨种类,种群内遗传多样性非常低。研究结果对于制定草莓上叶螨的防治策略具有指导意义。     

遗传算法优化神经网络的坡面入渗产流模型

引入遗传算法优化BP神经网络权重和阈值的方法建立黄土坡面产流入渗模型.模型以雨强、降雨历时、表层40 cm土壤前期含水量、坡度值为输入项,径流量、入渗量为输出项,用实测资料对网络进行模拟和预测.模拟结果平均误差6.32%和1.93%,预测结果平均误差为5.71%和1.92%.并与传统BP神经网络模型和定雨强Philip...     

烟草内生短短芽孢杆菌的分离鉴定及对烟草青枯病的防效

 在烟草青枯病区采取健康烟草植株,从其茎杆内分离到2株对烟草青枯拉尔氏菌(Ralstonia solanacarum)有强拮抗作用的内生菌株009和011。形态观察、生理生化鉴定及16S rDNA序列比对结果表明,菌株009和011均归属为Brevi-bacillus brevis,009、011菌株与B. brevis(AY591911)相似性分别为99.5%和99.0%,GenBank登录号分别为DQ444284、DQ444285。生长特性研究结果表明,它们的最适生长pH值分别为6.5、7.5,最适生长温度分别为25、30℃。温室内用淋根法分别先接种009和011菌株,后接种病原菌,其防效分别为87.25%和52.30%。用009和011菌液分别和烟草青枯病菌的混合液淋根,其防效明显低于前者。田间小区试验结果表明,011菌株的防效明显高于009菌株和农用链霉素。     

蝴蝶兰不同品种表型性状遗传多样性分析

以72份蝴蝶兰品种为研究对象,对其叶片、花梗和花器官相关的34个表型性状进行测定与评价,通过表型多样性分析、聚类分析和主成分分析等方法,探讨其种质资源表型性状的遗传多样性。结果表明：72份蝴蝶兰品种的绝大多数性状呈现变异丰富、类型多样的特性,数量性状遗传多样性变异范围为16.39%～157.36%,质量性状Shannon−Wiener多样性指数范围为0.38～1.32,其中叶片的数量性状变异程度较低,但其质量性状的多样性水平较高;R型聚类分析将34个性状分为3个大类,第I类群包含了花部和叶部性状,表明花与叶的表型联系较紧密,第II类群和第III类群包含花序长、最长叶长、植株大小和花序梗长,表明这4个表型性状呈独自进化关系; Q型聚类分析将72份蝴蝶兰种质资源分为4大类,其中第II类可细分为7个亚类群,II−1、II−2亚类群可作为大花和中花育种的亲本,II−3、II−4、II−5和II−7亚类群可作为小花育种的亲本,II−4亚类群可作为香花育种的亲本,同时蝴蝶兰‘JB5342’‘JB5184’‘JB5541’‘JB3697’‘安娜’和‘JB5725’等品种与多数供试蝴蝶兰品种遗传距离较远,可作为重要亲本参考。主成分分析表明,花宽、花瓣长、花瓣宽、萼片长、花长和萼片宽的特征向量绝对值较高,是造成蝴蝶兰表型变异的主要因素。     

Genetic Analysis and Mapping of TWH Gene in Rice Twisted Hull Mutant

A mutant with twisted hulls was found in a breeding population of rice (Oryza sativa L.). The mutant shows less grain weight and inferior grain quality in addition to twisted hulls. Genetic analysis indicated that the phenotype of mutant was controlled by a single recessive gene (temporarily designated as TWH). To map the TWH gene, an F2 population was generated by crossing the twh mutant to R725, an indica rice variety with normal hulls. For bulked segregant analysis, the bulk of mutant plants was prepared by mixing equal amount of plant tissue from 10 twisted-hull plants and the bulk of normal plants was obtained by pooling equal amount tissue of 10 normal-hull plants. Two hundred and seven pairs of simple sequence repeat (SSR) primers, which are distributed on 12 rice chromosomes, were used for polymorphism analysis of the parents and the two bulks. The TWH locus was initially mapped close to the SSR marker RM526 on chromosome 2. Therefore, further mapping was performed using 50 pairs of SSR primers around the marker RM526. The TWH was delimited between the SSR markers RM14128 and RM208 on the long arm of chromosome 2 at the genetic distances of 1.4 cM and 2.7 cM, respectively. These results provide the foundation for further fine mapping, cloning and functional analysis of the TWH gene.     

表达HAV结构基因的重组腺病毒鉴定及细胞病变分析

利用RT-PCR方法,从HAV-L8株的RNA中扩增出结构基因(vp3 vp1),克隆到穿梭质粒pXCX2NotI上。采用磷酸钙-DNA共沉淀技术,将腺病毒载体pJM17与pXCX2-CMV-HAV共转染293细胞。在光学显微镜下观察到明显的细胞病变(CPE);经RT-PCR、免疫荧光染色和蛋白印迹鉴定证明HAV的结构基因已插入到腺病毒基因组中;在电子显微镜下观察发现有二十面体的病毒颗粒。以上结果表明获得了重组腺病毒rAdHAV,纯化后的rAdHAV滴度为1×109.0TCID50/mL。     

Apparent seroprevalence,isolation and identification of risk factors for brucellosis among dairy cattle in Goa,India

Brucellosis is a highly contagious zoonotic infection affecting livestock and human beings. The disease has been reported worldwide except in few countries where it has been eradicated. The prevalence of brucellosis among cattle from 11 farms having a history of abortions was studied. A total of 481 samples comprising of blood, milk, vaginal swabs, vaginal discharges, placental tissues and fetal tissues were collected from 296 animals. Clinical samples were processed for the isolation of Brucella. Serum samples (n = 296) were tested by Rose Bengal Plate Test (RBPT) and indirect ELISA. A total of 90 (30.40%) and 123 (41.55%) samples were positive by RBPT and indirect ELISA, respectively. Also 27.02% samples were positive by both the tests. Brucella isolates (n = 8) were recovered from clinical samples using Brucella selective media. All the isolates demonstrated PCR amplification for the bcsp31 and IS711 genes. Amplification of Brucella abortus specific primer was demonstrated by all the isolates in AMOS PCR indicating isolates to be of either B. abortus biotype 1, 2 or 4. Risk factors for transmission of brucellosis among cattle population were studied by field surveys. It was observed that lack of awareness about brucellosis (OR = 8.739, P = 0.138) and inadequate floor space (OR = 0.278, P = 0.128) were crucial risk factors for transmission of bovine brucellosis.     

皱纹盘鲍人工育苗的初步研究

为探讨近三十年来我国皱纹盘鲍养殖模式对群体遗传结构产生的影响,利用线粒体细胞色素C氧化酶亚基 (COⅠ)基因和细胞色素b (Cytb)基因分析了定殖漳州的群体、大连培育蓬莱越冬群体、荣成培育福建越冬群体及长山列岛 (砣矶岛、大钦岛、南隍城岛)皱纹盘鲍群体的遗传多样性与群体遗传结构。结果显示,在259个个体730 bp的COⅠ序列片段中检测到48个变异位点和30个单倍型,6个群体的单倍型多样性为0.586~0.897,核苷酸多样性为0.0056~0.0081。259个个体730 bp的Cytb序列片段中检测到59个变异位点和32个单倍型,6个群体的单倍型多样性为0.605~0.909,核苷酸多样性为0.0077~0.0120。基于COⅠ和Cytb基因的群体间F_st值以及AMOVA结果表明,绝大部分群体之间存在显著的遗传分化,并且遗传变异主要来源于群体内。现行的皱纹盘鲍北鲍南养模式加强了不同群体之间的基因交流,使不同遗传背景的种群二次接触,导致皱纹盘鲍6个群体均具有较高的单倍型多样性和核苷酸多样性;而各养殖群体中的不同选育条件则可能是造成显著遗传分化的重要原因。本研究对分属南北沿海的6个皱纹盘鲍群体的遗传评估将为我国皱纹盘鲍资源的合理利用以及养殖模式对遗传结构的影响提供科学依据。

     

芹菜细菌性软腐病病原的分离与鉴定

 由植物病原细菌引起的芹菜软腐病在北京地区普遍发生,其中以顺义及通州区县较为严重。自发病芹菜茎段中分离细菌,通过接种芹菜进行致病性测定,确定了54个致病菌株。虽然菌株间致病力有一定的差异,但大多数菌株对芹菜致病力强。通过培养性状和菌体形态观察、生理生化反应和Biolog测定,结合胡萝卜软腐果胶杆菌Pectobacterium carotovorum 6个管家基因(pgi、rpoS、mdh、proA、mtlD、icdA)的基因扩增、序列测定和多基因联合系统发育分析,将病原菌鉴定为胡萝卜软腐果胶杆菌P. carotovorum的3个亚种。其中45个菌株为P. carotovorum subsp. odoriferum,频数为83.33%;6个菌株为P. carotovorum subsp. carotovorum,频数为11.11%;3个菌株为P. carotovorum subsp. brasiliensis,频数为5.56%。上述结果显示,北京地区芹菜细菌性软腐病的病原菌为胡萝卜软腐果胶杆菌P. carotovorum的3个亚种,其中以P. carotovorum subsp. odoriferum为优势种。     

Low genetic variability in Sclerotinia sclerotiorum populations from common bean fields in Minas Gerais State,Brazil, at regional,local and micro‐scales

Sclerotinia sclerotiorum, causal agent of white mould, is the most destructive and widely distributed soilborne pathogen of common bean during the autumn–winter season in Brazil. Nevertheless, little is known about the genetic structure of the pathogen population. Microsatellite (SSR) markers and mycelial compatibility groups (MCGs) were used to characterize 118 isolates collected from 20 bean fields located in the most important growing regions of Minas Gerais State (MG). Additionally, the genetic variability among 10 isolates obtained from a single sclerotium was investigated in 10 different sclerotia. Seventy SSR haplotypes and 14 MCGs were identified among the 118 isolates. The genetic differences within bean growing areas accounted for most of the genetic variation (72%). Despite the relatively high genotypic diversity, the SSR loci were at linkage disequilibrium. Moreover, 70% of the isolates were assigned to only two MCGs, and haplotypes of a given MCG were closely related. The discriminant analysis of principal components revealed five groups. There was strong genetic differentiation between isolates collected in one municipality in southern MG when compared to other regions. Common bean resistance to white mould should be assessed with representative isolates of the five genetic groups and, if possible, of the different MCGs detected in the present study. One to five haplotypes were detected among the 10 isolates obtained from a single sclerotium. Therefore, in order to ensure genetic identity of an isolate, hyphal tip or monoascosporic isolates should be used.