河地区花生根瘤菌的系统发育多样性研究

[目的]了解中国北方地区花生根瘤菌的多样性状况.[方法]采用16S rDNA PCR-RFLP、16S～23S IGS PCR-RFLP和16S rRNA基因的序列分析方法对分离自河北地区的58株花生根瘤菌以及Rhizobium、Agrobacterium、Sinorhizobium、Mesorhizobium和Bradyrhizobium的参比菌株进行系统发育多样性比较分析.[结果]16S rDNA PCR-RFLP方法在细菌属水平上聚群良好;而16S～23S IGS PCR-RFLP则适于属和种水平上的聚群.3种方法在系统发育上得到基本一致的结果.其中有38株花生根瘤菌是与Bradyrhizobium关系密切的慢生菌株,并且与B. japonicum和B. liaoningense的关系最为接近,与有关中国西南地区和华中地区花生根瘤菌的报道结果相似.然而供试菌株中还存在6株快生和10株中慢生花生根瘤菌,其中快生菌在系统发育关系上接近R. yanglingense、R. mongolense和R. gallicum.[结论]河北地区的花生根瘤菌具有更大的多样性.     

Sequence Analysis of mtDNA COIGene and Molecular Phylogeny of Different Geographical Populations of Bemisia tabaci (Gennadius)

Bemisia tabaci(Gennadius) is a serious pest in many cropping systems worldwide and occurs in different biotypes. The mtDNA COI gene of the 12 Bemisia tabaci (Gennadius) populations from different regions and countries were analyzed.Based on mtDNA COI sequences, their biotypes were characterized and phylogenetic relationships among these populations were established with the method of UPGMA. The results indicated the genetic similarity between those populations from Beijing, Zhengzhou, Zaozhuang, Nanjing, Shanghai, Haikou, and the B-biotype populations from California, Texas, Arizona reached 99.8-100%, which meant the nation-wide infested populations of B. tabaci in China in recent years were B-biotypes. Another population collected from Kunming of Yunnan Province showed very high similarity with Q-biotype B. tabaci from Spain and Morocco, which meant the Kunming population was Q-biotype. This is the first report on the invasion of Q-biotype into China.     

杨树溃疡病病原——葡萄座腔菌科真菌间关系的系统学初探

利用ITS rDNA序列对我国杨树溃疡病的葡萄座腔菌科病原真菌进行系统发育学分析,共得到4种葡萄座腔菌科病原真菌:Botryosphaeria dothidea,Neofusicoccum parvum,Diplodia seriata和D.mutila。它们与相应的无性型或有性型一一对应。其中,D.seriata在我国是第一次报道为杨树的病原。研究了试验菌株与国内外已报道菌株间的系统发育学关系,分析了它们与环境间的联系。结果表明B.dothidea具有高度的种内遗传多样性。这些结果对葡萄座腔菌科真菌在全球的分布作了必要的补充,也为杨树溃疡病的研究和防治提供进一步的理论基础。     

6个新疆矮化核桃品种的指纹图谱构建及亲缘关系分析

以8个核桃品种叶片为材料,利用ISSR技术,从100条ISSR引物中筛选出2条对8份DNA进行PCR扩增,共扩增位点34个,其中多态位点24个(比例达70.58%),构建出8个核桃品种的数字化指纹图谱。以NTSYSpc2.1软件计算品种指纹图谱的相似系数(GS)并进行(UPGMA)聚类分析,样品间的GS在0.54～0.94之间,在GS=0.64处将8个核桃品种分成2组:第一组母本为‘扎343’(1号),矮化品种有‘新温724’(4号)和‘新温908’(5号);第二组母本为‘新早丰’(2号),矮化品种有‘新温609’(3号)、‘新温915’(6号)、‘新温916’(7号)和‘新温917’(8号),与田间表现基本一致。     

New versus old scientific names in strawberries (Fragaria L.)

New Potentilla synonyms of the Fragaria species names are discussed and considered to be dispensable. Further unnecessary nomenclatural changes based on the argument to recognize monophyletic but not paraphyletic taxa should be avoided to maintain nomenclatural stability for global communication about plant genetic resources. The new combination Fragaria×rosea (Mabb.) K. Hammer et Pistrick is presented for the hybrid Potentilla palustris (L.) Scop. ×Fragaria×ananassa Duchesne ex Rozier.     

Genetic polymorphism of plastid DNA in Tunisian date-palm germplasm (Phoenix dactylifera L.) detected with PCR-RFLP

Fifteen plastid fragments were amplified from a set of Tunisian date-palm accessions by PCR with consensus primers and analysed by RFLP. Polymorphic DNA bands were obtained as reliable molecular markers to estimate genetic distances among the accessions and to examine their phylogenetic relationships. The ctDNA PCR-RFLP method permitted the identification of two haplotypes that differ in the presence or absence of the HinfI restriction site. Phenetic groups composed of cultivars clustered together but does not constitute monophyletic groups. This typology agrees with the haplotypes' organization and provides a common genetic background within the implied varieties.     

部分栽培葱属植物叶绿体基因组的RAPD分析

  提取我国栽培的几种主要葱属植物的叶绿体DNA , 利用RAPD 技术进行遗传关系分析。从56 个10 bp 随机引物中筛选出18 个多态性引物进行扩增分析, 14 个材料共扩增出270 条带, 其中246 条具多态性。UPGMA 聚类将供试葱属品种分成4 个组。葱属在进化上存在两个方向, 分别形成了管状叶和扁平叶两种类型。     

Comparison of sequences for the internal transcribed spacer region in <Emphasis Type="Italic">Rhizoctonia solani</Emphasis> AG 1-ID and other subgroups of AG 1

The rDNA-ITS sequence of Rhizoctonia solani AG 1-ID was determined and compared to those of R. solani AG 1-IA, AG 1-IB, and AG 1-IC. The similarity of the isolates from each AG 1 subgroup was almost identical (99%–100%), whereas it was lower between subgroups (91%–95%) than within subgroups. Phylogenetic analysis indicated that isolates of AG 1-ID and other subgroups were separately clustered. Isolates of R. solani AG 1 were clearly separated from R. solani AG 2-1, AG 4, and binucleate Rhizoctonia AG-Bb and AG-K. These results showed that analysis of the rDNA-ITS sequence is an optimal criterion for differentiating R. solani AG 1-ID from other subgroups of R. solani AG 1.     

The relationship of soil province to molecular characterization and phylogenetic analysis of Cryptosporidium parvum isolated from calves in Georgia

Although Cryptosporidium spp. are found throughout the world and in multiple environmental conditions, few data are available that explore the possibility of an association between specific environmental parameters and the species or strain of Cryptosporidium. This study examines the potential association between a particular Cryptosporidium species/strain found in calves and soil provinces in Georgia, USA. Necropsy cases spanning the years 1996-2002 were tested. No significant differences (P=0.962, chi(2) test of homogeneity) between numbers of positive cases were noted among soil provinces. Phylogenetic analysis of the sequences for the PCR products revealed sequence similarity of the products with Cryptosporidium parvum strain C1. Although, clinical Cryptosporidiosis in calves was not found to be affected by soil province and may be caused by a single genotype, other genotypes may be responsible for subclinical infection and warrant further investigation.     

葱蝇ADH基因的克隆及序列分析(英文)

[目的]对葱蝇(Delia antiqua)ADH基因进行克隆,并对其进行序列分析。[方法]通过RACE的方法克隆葱蝇ADH基因的cDNA序列,同时对该序列进行同源性分析、氨基酸序列比对和系统发育分析。[结果]试验获得的cDNA全长1088bp,其中ORF771bp,编码256个氨基酸,推测其相对分子质量为30.80kDa,等电点为8.22;通过该基因推导的氨基酸序列与其他物种的ADH进行相似性比较和系统发育分析,发现葱蝇与刺舌蝇(Glossina morsitans morsitans)氨基酸序列的同源性最高。[结论]该研究为ADH基因的进一步研究提供了基础。