The future of tropical species in secondary forests: A quantitative review

Deforestation and degradation of tropical old-growth forests has the potential to cause catastrophic species extinctions. In this review, we assess whether regenerating secondary forests (SF) can support species typically found in old-growth forest (OG) and so prevent extinctions. We review 65 studies that compare faunal diversity in SF and corresponding OG, and compare the similarity of species composition both within and between these two forest types using the Sorensen, Morisita-Horn and Sorensen-Chao indices. Comparisons between traditional similarity indices and Sorensen-Chao, which minimizes sampling biases, indicated that limited sampling effort consistently reduced apparent similarity between SF and OG and that similarity between SF and OG is actually higher than previously appreciated. Similarity, which ranges from 0 to 1, varied from 0.49 to 0.92 between replicate OG sites and was correlated with similarity between SF and OG. This correlation might be an artefact of variation among studies in sampling effort, especially for vertebrates where small samples reduce apparent similarity across all comparisons, as well as a real effect of variation among studies in landscape heterogeneity and the presence of species with patchy distributions. Therefore, similarity between SF and OG cannot be interpreted without an understanding of background variation in OG. Similarity between different SF sites provided no evidence that disturbance specialists dominate SF. Similarity to OG increased rapidly with SF age; when SF was contiguous with OG; when SF was growing in small clearings; and after low intensity land uses including clearing only, shifting agriculture and tree plantations. This describes the most frequently observed tropical SF; isolated from roads and on hilly terrain unsuitable for mechanized agriculture. Thus, our analyses indicate that tropical SF can play an important role in biodiversity conservation particularly when OG forests are nearby. An important caveat remains, however. Abundance, geographic range and levels of habitat specialization are often related. Widespread, abundant, habitat generalists might dominate similarity analyses even when relatively rare OG specialists are present. Additional species-level analyses of habitat specialization will be needed before the conservation value of tropical SF is fully understood.     

Variation of mineral nutrient contents of modern and heirloom cultivars of cabbage in different regimes of soil fertility

An improvement in the mineral nutrient contents of fruits and vegetables is needed to offset reported declines in concentrations of these elements in fruits and vegetables. The declines have been associated with the high productivity of modern cultivars and to depleted soil fertility. This research addressed differences in mineral nutrient concentrations between modern F1 hybrids and heirloom cultivars of cabbage (Brassica oleraceae var. capitata L.)and among fertilization practices with conventional chemical or organic fertilizers and compost. Crop production was greater with the chemical or organic fertilizers than with the compost. Mineral nutrient composition did not vary between modern or heirloom cultivars or among fertilization regimes but varied among cultivars, suggesting that cultivar selection could lead to production of nutrient-rich cabbage. Neither mass of heads nor days to maturation of crops affected nutrient composition.     

有效降水指数在暴雨洪涝监测和评估中的应用

科学有效的监测和评估是防范和减轻暴雨洪涝灾害的重要基础。基于有效降水指数(EP)构建单站和区域暴雨洪涝监测、评估指标,利用1961-2014年湖北省76站逐日气象观测资料及相关灾情资料,确定降水衰减参数及致涝阈值,在此基础上分析EP指数在历史暴雨洪涝评估及实时暴雨洪涝过程监测中的应用效果。结果表明：经参数率定后的EP指数对农作物洪涝受灾面积的解释方差达78.1%,对年际间暴雨洪涝强度差异反应敏感,能识别历史典型大涝年和严重洪涝年,在2014年实时暴雨洪涝过程监测中能直观诊断出一般性暴雨洪涝的起止时间和过程动态变化,但对局地性和间歇性发生的暴雨洪涝过程刻画不足。创建EP指数所需数据资料少、计算简便,可用于洪涝灾害历史排位、年景评价、灾情预评估、风险区划以及作物产量建模等。     

Potassium behavior and clay mineral composition in the soil with low effectiveness of potassium application

ABSTRACT

Increasing exchangeable potassium (ExK) content in soil to an appropriate level is important to mitigate the transfer of radioactive cesium to crops. We focused on a buckwheat (Fagopyrum esculentum Moench) field with a low ExK content, despite the application of K, in Fukushima Prefecture, Japan (Field A), following the Tokyo Electric Power Company Fukushima Dai-ichi (No. 1) Nuclear Power Plant accident in March 2011. We examined the relationship between K concentration and clay mineral composition in the soil of Field A and compared the findings with another field in Fukushima Prefecture (Field B) to clarify whether K applied to the soil was leached or remaining fixed. Pot experiments showed that K concentration in water seepage from pots following irrigation was significantly lower in pots from Field A than in those from Field B. Soil ExK content after soybean cultivation was lower in soils of Field A than those of Field B. These results indicate that K applied to Field A was fixed in the soil. Analysis of clay mineral composition confirmed the distinctive vermiculitic nature of Field A soils. This clay mineralogy would be associated with the higher K fixation ability of Field A than Field B soils. This study demonstrated that K fixation in vermiculite was a factor preventing the increase in ExK content from K application to Field A.     

渭北旱塬长期施肥试验中氨氧化细菌的多样性及群落结构分析

以中国科学院长武黄土高原农业生态试验站23 a长期施肥定位试验的土壤样品为研究对象,通过构建氨氧化细菌的amoA基因克隆文库,采用PCR-RFLP方法分析了裸地（LD）、种植不施肥（CK）、单施氮肥（N）、单施磷肥（P）和氮磷共施（NP）这5个处理条件下土壤中氨氧化细菌的多样性及其群落结构。结果表明,N处理的土壤中氨氧化细菌的Shannon-Wiene（rH′）和Margalef（dM）a指数均最高,其次是CK、NP、P,而LD处理中最低,表明长期单施氮肥后增加了土壤中氨氧化细菌的多样性和丰富度,长期种植作物后也同样会增加土壤中氨氧化细菌的多样性和丰富度,但单施磷肥和氮磷共施后土壤中氨氧化细菌的多样性和丰富度都有所降低。基于amoA基因建立的系统进化树显示,所有来自于各处理条件下土壤中氨氧化细菌的优势种群都是属于Nitrosospira和Nitrosospira-like,与Nitrosospira cluster 3聚为一组,但优势菌种在克隆文库中所占的比例不同,表明不同的施肥处理下土壤中氨氧化细菌的群落结构发生了改变。     

Nitrogen availability decreases prokaryotic diversity in sandy soils

In this study, the interrelation between nitrogen availability and prokaryotic diversity are studied using a well-characterised system from a long-term field experiment on a loamy sandy soil. The prokaryotic potential functional diversity and community composition were assessed using community-level physiological profiling (CLPP), and their phylogenetic diversity was analysed using polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) in combination with sequencing analysis. Highest prokaryotic potential functional diversity was measured in the control soil receiving no N fertilisation, indicating an efficient as well as versatile utilisation of the substrates in this soil. Both substrate utilisation richness and substrate utilisation evenness, the two constituents of the functional diversity, were decreased with increasing N supply. Furthermore, distinct prokaryotic community compositions were generated in N-enriched soils compared to unfertilised control soils. These differences suggest a dominance of populations adapted to utilising readily available substrates. We demonstrated that the shift in prokaryotic functional diversity was connected to a shift in the phylogenetic structure of the bacterial and archaeal communities. Taken together, our data clearly show that, for the sandy soil system, prokaryotic diversity and N availability were interrelated.     

Saccharides of ectomycorrhizal fungal sclerotia as sources of forest soil polysaccharides

ABSTRACT

The neutral monosaccharide composition of forest soils differs from that of non-forest soils suggesting there is an accumulation of microbial saccharides. Ectomycorrhizal (ECM) fungi can be responsible as the fungi are typical in forest soils. We investigated neutral saccharides of ECM fungal sclerotia to determine what part it might play in the origin of forest soil polysaccarides. Sclerotial grain (SG) was collected from the O, A1 and A2 horizons of a soil of subalpine forest of Mt. Ontake, central Japan. Neutral saccharides in soil and SG were analyzed by two step hydrolysis with sulfuric acid and gas-chromatography of alditol acetate derivatives. Saccharides accounted for 6.0?16% of the SG by carbon content. The SG contained predominantly easily hydrolysable (EH)-glucose, which accounted for 75–85% of the composition depending on grain size and the soil horizon, followed by mannose (7.7?15%), galactose (2.2?4.8%) and non-easily hydrolysable (NEH)-glucose (1.7?6.1%). The SG contained all of these sugars irrespective of its size. The SG collected from the A1 and A2 horizons contained all sugar components found in that from the O horizon, except for fucose in that from A2 horizon. The monosaccharide composition of SG indicates that accumulation of ECM fungal sclerotial polysaccharides might have been responsible for enlarging the molar ratios of (galactose + mannose) /(arabinose + xylose) and EH-glucose/NEH-glucose of forest soils. The proportions of SG saccharides relative to soil saccharides were 3.6, 1.2, and 0.83% for the O, A1 and A2 horizons, respectively. These levels of the proportion are considerable as ECM fugal sclerotia are the products of a limited species among hundreds and thousands of microbial species inhabiting forest soils. The sclerotia forming ECM fungal species such as Cenococcum geophilum may be key sources of forest soil polysaccharides.     

Effect of rice straw on the composition of volatile soil gas and micro flora in the tropical paddy field

The effect of rice straw on the composition of volatile soil gas and microflora in the tropical paddy field was studied with and without fertilizer application.

The volatile soil gas most abundantly found in plots with rice straw was methane followed by other gases, nitrogen, oxygen and carbon dioxide during the early stage of rice growth, while nitrogen predominated in later stages.

The loss of soil nitrogen through volatilization increased following phosphorus application as well as rice straw application as compared with that in the control plot. In the former case, the enhancement of decomposition of organic-N was assumed to be due to the increase in population of cellulose decomposer.

Rice straw application with or without N-fertilizer increased methane gas formation by 27 to 63 times as compared with the phosphorus plot and the peak of its formation was found 5 to 7 weeks after rice straw application. However methane formation in the control plot was very low and was found only 5 to 9 weeks after flooding.

Rice straw application usually increased the number of various groups of microorganisms along with contributing to the transformation of organic-N to N₂ gas. But the stimulating effect was chiefly observed in the population of Azotobacter.     

Changes in fatty acid composition with age and environment in different types of peat profiles in Japan

Fatty acid composition of the crude lipid fraction of peat was investigated using several typical peat profiles in Japan. Fatty acid composition varied with the peat layers accumulated in a peat profile since 32,000 years BP. Deposition of long-range transported volcanic ash tephras also affected the composition remarkably due to the acceleration of decomposition. Fatty acid composition differed among high moor, transitional moor, and low moor peat profiles sampled in several locations in Hokkaido, Japan. The difference in the plants involved in the formation of peat was considered to be a very important factor determining the fatty acid composition. For example, arachidic acid was considered to be a good indicator for the presence of reed, while the percentage of stearic acid tended to be high in the high moor peat profiles dominated by sphagnum. As the fatty acids with a longer chain length were more stable than those with a shorter chain length, the percentage of longer fatty acids (C24 and C26) tended to increase and that of shorter fatty acids (CI4 and CI6) to decrease in the lower peat profiles. The drying of peatland also exerted a similar effect on the fatty acid composition.