Variations in a regional fire regime related to vegetation type in San Diego County, California (USA)

This study considers variations in a regional fire regime that are related to vegetation structure. Using a Geographic Information System, the vegetation of San Diego County, Southern coastal California USA is divided into six generalized classes based on dominant plant form and include: herbaceous, sage scrub, chaparral, hardwood forest, conifer forest and desert. Mapped fire occurrences for the 20th century are then overlain to produce records of stand age, fire frequency and transitional stability for each of the vegetation classes. A ‘Manhattan’ similarity index is used to compare and group transition matrices for the six classes of vegetation. This analysis groups herbaceous, hardwood and conifer forests in one group, sage scrub and chaparral in a second, and desert in a third. In general, sage scrub and chaparral have burned more frequently than other vegetation types during the course of the 20^th century. Temporal trends suggest that the rate of burning in shrub-dominated vegetation is either stable (chaparral) or increasing (sage scrub), while the rate of burning in both hardwood and conifer forest is declining. This is consistent with a pattern of increased fire ignitions along the relatively low elevation urban-wildland interface, and an increase in the efficiency of fire suppression in high elevation forests. This revised version was published online in May 2005 with corrections to the Cover Date. This revised version was published online in July 2006 with corrections to the Cover Date.     

Diets of top predators indicate pelagic juvenile rockfish (Sebastes spp.) abundance in the California Current System

Diets of top predators may be useful indicators to the availability of forage fish in marine ecosystems. Juvenile rockfish (young‐of‐the‐year Sebastes spp.) compose a significant part of the diet for many predators in the central California Current, including chinook salmon (Oncorhynchus tshawytscha), and several species of marine birds and mammals. Herein, we develop annual indices of juvenile rockfish relative abundance by collating time series data sets on: (i) the proportion of rockfish in the diet of three species of seabirds breeding on Southeast Farallon Island (1975–2002); (ii) the number of rockfish in chinook salmon stomachs (1980–99); and (iii) the abundance of rockfish captured in scientific mid‐water trawl net surveys (1983–2002). We used Principal Component Analysis (PCA) to combine indices, and refer to these as ‘Multivariate Rockfish Indices’ (MRI). Combining time series verifies the patterns shown by each alone and provides a synoptic perspective on juvenile rockfish relative abundance. The diets of predators with the largest foraging ranges (Common Murre, Uria aalge) and chinook salmon co‐varied strongly with the net samples, and appear to be the best indicators. The salmon also sampled species of Sebastes not caught in the nets. The MRI reveals interannual variability in juvenile rockfish abundance, a substantial decline in abundance in the 1990s, and a partial recovery in the early 2000s. Predator‐based sampling is a cost‐effective enhancement of scientific net sampling.     

Assessing conservation trade-offs: identifying the effects of flooding rice fields for waterbirds on non-target bird species

I examined how winter flooding of post-harvest rice fields—a management practice used to benefit waterbirds—affects field use by other birds. In addition to waterbirds previously studied, I recorded 56 bird species in rice fields. Of these, five were more abundant in flooded fields, ten were more abundant in unflooded fields, no difference was detected for 19, and the remainder were too rare to draw any conclusions. Species that were more common in unflooded fields were all carnivorous or granivorous in winter, whereas species that were more common in flooded fields were mostly insectivores commonly associated with aquatic habitats. The net effects of the responses by individual species were fewer raptor species in flooded fields, but no difference in the species richness of other landbirds. Winter flooding potentially has negative effects for some birds, but has no discernible effects on most species studied and may benefit some passerines.     

Outbreak of rabbit hemorrhagic disease virus 2 in the southwestern United States: first detections in southern California

An outbreak of rabbit hemorrhagic disease virus 2 (RHDV2)-associated disease occurred in the southwestern United States following its first detection in New Mexico in March 2020. The disease spread throughout several states and was diagnosed for the first time in California on May 11, 2020, in a black-tailed jackrabbit (Lepus californicus). The following day, the California Department of Food and Agriculture (CDFA) issued an order banning the entrance into California of several lagomorph species and their products from any state in which the disease had been detected in the last 12 mo. RHDV2 is a threat to wild lagomorph species in California, including the endangered riparian brush rabbit (Sylvilagus bachmani riparius). Therefore, the California Department of Fish and Wildlife (CDFW) started tracking any mortality event in wild lagomorph populations. As of August 9, 2020, RHDV2 had been detected in wild and domestic lagomorphs of several counties in southern California that were submitted to the California Animal Health and Food Safety laboratory system by the CDFA or the CDFW. These positive cases included 2 additional black-tailed jackrabbits and 3 desert cottontail rabbits (Sylvilagus audubonii). In addition, the infection spilled over to domestic populations, whereby it was confirmed on July 10, 2020, in a domestic rabbit (Oryctolagus cuniculus).     

Responses of oaks and tanoaks to the sudden oak death pathogen after 8 y of monitoring in two coastal California forests

Sudden oak death, caused by Phytophthora ramorum, is widely established in mesic forests of coastal central and northern California. In 2000, we placed 18 plots in two Marin County sites to monitor disease progression in coast live oaks (Quercus agrifolia), California black oaks (Q. kelloggii), and tanoaks (Lithocarpus densiflorus), the species that are most consistently killed by the pathogen in these areas. Through early 2008, the numbers of newly infected trees increased for all species. The infection rate for trees that were asymptomatic in 2000 was 5.0% y⁻¹ for coast live oaks, 4.1% y⁻¹ for black oaks and 10.0% y⁻¹ for tanoaks. Mortality rates were 3.1% y⁻¹ for coast live oaks, 2.4% y⁻¹ for black oaks, and 5.4% y⁻¹ for tanoaks. Mortality not attributed to P. ramorum was 0.54% y⁻¹ for coast live oaks, and 0.75% y⁻¹ for tanoaks. Weibull survival models of trees that were asymptomatic in 2000 provided overall median survival times of 13.7 y for coast live oaks, 13.8 y for black oaks, and 8.8 y for tanoaks. Survival of infected (bleeding) trees declined to 9.7 y for coast live oaks, 6.2 y for black oaks, and 5.8 y for tanoaks. Ambrosia beetle attacks on bleeding trees further reduced modeled survival times by 65–80%, reaffirming the earlier finding that beetle attacks on bleeding cankers considerably reduce survival. Across all plots, the modeled time for 90% of trees that were asymptomatic in 2000 to become infected is 36.5 y for coast live oaks and 15.4 y for tanoaks. There was a trend toward higher infection rates as tree diameter increased. Greater than 90% of living coast live oaks that failed during the study had extensive beetle tunneling at the site of the break. Disease intensity in coast live oaks at the plot level was positively associated with bay laurel (Umbellularia californica) basal area and negatively associated with Pacific madrone (Arbutus menziesii) basal area. This study demonstrates the use of survival modeling to characterize the effects of epidemic disease on different species and to project the future of forests infected with tree pathogens.     

An efficacy test of cholecalciferol plus diphacinone rodenticide baits for California voles (Microtus californicus Peale) to replace ineffective chlorophacinone baits

California voles cause damage to pastures and rangelands, orchards and nurseries, and a wide variety of field crops, including artichokes. The anticoagulant rodenticides (chlorophacinone and diphacinone) typically used for voles are becoming less effective in controlling their populations. Consequently, there is a need to identify new rodenticides that will have a high efficacy on California voles so that agricultural production losses to rodents can be substantially reduced. We tested a new formulation containing two active ingredients (cholecalciferol and diphacinone) as a control method for California voles. Both a pelleted bait and an oil-coated artichoke bract bait were very palatable and efficacious against wild-caught, captive California voles. Efficacy levels of 70%–80% were achieved in the two-choice feeding trials. Additionally, the days-to-death (5–6 days) were less than the time-to-death with anticoagulant only baits. We recommend that a field efficacy study be conducted with cholecalciferol plus diphacinone bait formulations to determine their field performance in the reduction of agricultural damage by California voles.     

Farmer goals and management styles: Implications for advancing biologically based agriculture

This paper examines differences in the management styles of a purposive sample of almond and winegrape growers in California’s Central Valley, including participants and non-participants in biologically integrated farming systems programs. Using Q methodology, we elicited rankings of economic and social values and goals as they relate to farm production, environmental stewardship, family and community, and leisure. These rankings led to three distinct management styles, labeled as Environmental Stewards, Production Maximizers, and Networking Entrepreneurs. The results demonstrate that farmers make decisions following diverse management strategies and suggest that outreach programs aimed at advancing biologically based farming practices must address these differences to be most effective.     

Irrigation water issues potentially related to the 2006 multistate E. coli O157:H7 outbreak associated with spinach

A multistate Escherichia coli O157:H7 outbreak in August and September 2006 was found to be associated with consumption of fresh bagged spinach traced to California. The California Food Emergency Response Team (CALFERT), consisting of personnel from the California Department of Public Health Food and Drug Branch (FDB) and the U.S. Food and Drug Administration (FDA) undertook an environmental investigation to determine how and why the spinach became contaminated. At the invitation of FDA and FDB, the Centers for Disease Control and Prevention (CDC) also participated in the environmental investigation. This paper presents findings from the portion of the environmental investigation focusing on environmental factors related to irrigation water that may have contributed to contamination of the spinach and hence to the outbreak. Analysis of the available data suggests that depths to groundwater and groundwater-surface water interactions may pose risks to ready-to-eat crops. These risks should be further evaluated and quantified to understand and identify the factors that contributed to this and similar outbreaks.One implication of this analysis is the need to continue to conceptually broaden the scope of produce-related outbreak investigations. Where feasible, investigation strategies should integrate possible contamination sources beyond those actually found on the farms that are identified as sources of produce involved in outbreaks.     

Lifting and storing bareroot blue oak (Quercus douglasii) seedlings

In California today, several species of native oaks are not regenerating adequately. Artificial regeneration is a means of ensuring sufficient recruitment to replace trees that die or are harvested, and restoring areas where trees have been cleared. Until recently, however, no bareroot oak seedlings were being produced in the state and there was little information to guide nursery operators. This study evaluated the potential of bareroot blue oak seedlings to survive and grow after outplanting. Results indicated that 1-0 nursery stock performed well in the field as long as seedlings were planted early enough in the season to take advantage of a favorable growing environment. Late lifting and long storage resulted in planting at a time when soils were already becoming dry and temperatures were hot. As a result, seedlings grew slowly or even died. Seedlings lifted early in the season (December) grew best. Either one or two months of storage had little effect on seedlings lifted at this time of year. However, seedlings lifted in January, February, and even early March performed adequately as long as they were in the ground by early March. In this study, root growth capacity was not a good predictor of subsequent field performance.