Accuracy of imputation of single nucleotide polymorphism marker genotypes from low‐density panels in Japanese Black cattle

Using target and reference fattened steer populations, the performance of genotype imputation using lower‐density marker panels in Japanese Black cattle was evaluated. Population imputation was performed using BEAGLE software. Genotype information for approximately 40 000 single nucleotide polymorphism (SNP) markers by Illumina BovineSNP50 BeadChip was available, and imputation accuracy was assessed based on the average concordance rates of the genotypes, varying equally spaced SNP densities, and the number of individuals in the reference population. Two additional statistics were also calculated as indicators of imputation performance. The concordance rates tended to be lower for SNPs with greater minor allele frequencies, or those located near the ends of the chromosomes. Longer autosomes yielded greater imputation accuracies than shorter ones. When SNPs were selected based on linkage disequilibrium information, relative imputation accuracy was slightly improved. When 3000 and 10 000 equally spaced SNPs were used, the imputation accuracies were greater than 90% and approximately 97%, respectively. These results indicate that combining genotyping using a lower‐density SNP chip with genotype imputation based on a population of individuals genotyped using a higher‐density SNP chip is a cost‐effective and valid approach for genomic prediction.     

Polymorphism of P53‐Ets/AP1 transactivation region of MDM2 oncogene and its immunohistochemical analysis in canine tumours

Mouse Double Minute‐2 (MDM2) is an ubiquitin ligase which is overexpressed or its promoter polymorphism has been reported in different tumours. The objective of this study was to examine the MDM2 protein expression and its promoter polymorphism in some canine tumours. Twenty specimens were collected from 20 dogs with 15 mammary gland carcinomas, 3 lymphomas, 1 transmissible venereal tumour and 1 trichoblastoma. Samples were analysed immunohistochemically using human antibody against MDM2 protein. PCR and DNA sequencing were carried out to identify MDM2 promoter polymorphism. MDM2 gene was expressed in 13 of 20 samples including 11 mammary carcinomas, 1 lymphoma and 1 trichoblastoma. We found 94% homology between canine and human sequences. Four mutations including G169C, A177G, G291T and A177G were identified in different types of breast carcinomas. An extra p53 response element was found in a mixed mammary carcinoma.     

2019—2020年苏浙皖三省小麦叶锈菌群体的致病类型鉴定及毒性结构分析

为持续控制小麦叶锈病及促进小麦的抗叶锈病育种工作,2019—2020年自江苏、浙江和安徽3个省采集自然感叶锈病的小麦病叶,经分离获得小麦叶锈菌单孢分离物,利用43个小麦叶锈病鉴别寄主材料对其致病类型进行鉴定,并对其毒性结构进行分析。结果显示,从170份小麦叶锈菌单孢分离物中共鉴定出67个致病类型,主要致病类型为THS、SHJ、PHS和SHS,出现频率分别为8.8%、7.6%、5.9%和5.9%。江苏、浙江和安徽3个省的单孢分离物对携带抗叶锈基因Lr10、Lr12、Lr22a、Lr22b、Lr29、Lr33、Lr35和Lr36的鉴别寄主材料的苗期毒性频率均超过90.0%,而对携带抗叶锈基因Lr9、Lr24、Lr25、Lr28、Lr38、Lr40、Lr41、Lr42、Lr43和Lr13+3ka的鉴别寄主材料的苗期毒性频率均小于10.0%。卡方检验及Fisher精确检验显示,3个省小麦叶锈菌群体对抗叶锈基因Lr1、Lr2a、Lr3、Lr14b、Lr18、Lr21、Lr26、Lr27+31、Lr32和Lr37的毒力存在显著分化。浙江省小麦叶锈菌群体具有较少的毒性因子（4.73）和毒性值（600...     

牛Myostatin基因单核苷酸多态性分析

Myostatin基因即肌肉生长抑制素，是一种肌肉生长的负调控因子。应运PCR-SSCP和测序的方法对中国秦川牛、南阳牛以及国外引入品种皮埃蒙特牛双肌基因的第三外显子进行了多态性分析。结果表明：第三外显子938处G→A的单核苷酸的突变造成了南阳牛、皮埃蒙特牛第三外显子扩增片段多态性,秦川牛则不然。     

Using of AFLP Marker to Predict the Hybrid Yield and Yield Heterosis in Rice

利用AFLP分子标记对46个水稻品种进行遗传多样性分析,继而研究分子标记遗传距离与按照NC设计获得的195个杂交组合的产量及特殊配合力的相关性,探讨预测杂种优势的可能性。结果表明:(1)通过UPGMA聚类分析(图3),可将供试材料分为16个类群,并把来源不明的品种(系)划分到相应类群中,从而对这些材料进行初步鉴定。可见,AFLP分子标记是检测类内品种间遗传差异的有效方法,为水稻品种(系)亲本选配提供理论依据。(2)分子标记遗传距离与杂种产量优势、F1产量、特殊配合力之间都呈显著正相关,相关系数介于0.3235-0.7713之间。但相关程度还不足以预测杂种优势。增效座位和减效座位以及使用与杂种优势有关的QTL连锁标记位点可能提高杂种优势的预测能力,但最终解决,将依赖于杂种优势遗传机理的研究。     

Experimental Study on the Extended Length of Negative Reinforcement Cut-in Phases in Continuous Beams

In this paper through the static loading tests of 6 inflexion zones and 2 cantilever zones in full-size constrained R/C beams, the stress performance in rebars cut-in-phases and subjected to negative moment is studied. The stress properties of extended length of rebars with different shear-span ratiosare analysed on basis of the full measurement of strain distributions combined with the investigation on state and regularity of the diagonal cracks development and series of new knowledge are obtained. It is found that current Concrete Design Code provisions on the extended length are inadequate for the high shear-span ratio and superfluous for the low shear-span ratio. The theoretical and experimental foundations are provided for determining proper value of extended length for rebars cut-in-phases.     

CALCULATING SYSTEM FOR SECOND-ORDER EFFECT IN THE COLUMNS OF REINFORCED CONCRETE FRAMES

This paper makes an analysis and comparison of the calculatingsystem for second-order effect in columns of reinforced concrete frames proposedby scholars at home and abroad,and the systems adopted by codes of manycountries.The focus is on explaining the conceptual error and deficiency in somemethods.After expounding the basic law of the second-order effect in framecolumns with different restraints,this paper suggests an improvement of thecalculating system for second-order effect in frame columns for China's DesignCode of Concrete Structures.     

低压射流不同喷嘴参数及压力下破碎过程实验

研究了不同低压下喷头喷嘴直径和喷嘴锥角对射流破碎的影响。采用高速摄像仪对低压圆柱射流的射流核心长度和射流破碎长度进行实验,测量了不同喷嘴结构的流量、射程和末端水滴直径。结果表明:同一压力下,当喷嘴锥角不变时,随着喷嘴直径的增大,喷头流量、射程和喷头末端水滴直径都变大,射流核心长度和破碎长度均增大;当喷嘴直径不变时,随着喷嘴锥角的增大,喷头流量逐渐减小,而喷头射程呈先增大后减小趋势,喷头末端水滴直径也变大,射流核心长度逐渐减小,射流破碎长度先减小后增大。综合考虑射程和雾化效果,直径为5 mm、锥角为45°的喷嘴为最优选择。同时通过对不同Re数和We数的实验和分析,给出了适合低压喷嘴的两种射流特征长度的拟合关联式。     

补偿式滴头的研制

补偿式滴头是微灌设备中最理想的灌水器,它除能保持滴水量衡定、提高灌水质量外。还具有减缓堵塞、自身清洗之功能,而且能降低工程造价。国产补偿式滴头研制成功,填补了国内空白,也为进一步开展补偿式灌水器研究积累了经验。