18S rRNA／rDNA序列分析技术在瘤胃原虫分类学研究中的应用

作者指出了反刍动物瘤胃原虫分类学研究中的难点，介绍了原虫分类学中新兴的分子生物学指标(18S rRNA／rDNA序列同源性)，综述了18S rRNA／rDNA序列分析技术在瘤胃原虫分类研究中的应用。     

Phylogenetic analysis of the genus Anaplasma in Southwestern China based on 16S rRNA sequence

To identify the species within the genus Anaplasma circulating among ruminants in the Southwest of China, we performed the phylogenetic analysis of the 16S rRNA gene of two Anaplasma isolates from cattle and seven from goats. The two sequences obtained from cattle strains belonged to the A. marginale cluster, whereas the other seven sequences from caprine strains formed two Anaplasma spp. clusters, which diverged earlier than the clusters of A. marginale, A. centrale and A. ovis. These results indicate that there are at least two Anaplasma species circulating among ruminants in Southwestern China.     

First report of Wolbachia from field populations of Culex mosquitoes in south-western Nigeria

Recent reports on finding Wolbachia-strain infections in field mosquito species in some West African countries and the potential for developing these as disease vector biocontrol tools have prompted a search for Wolbachia in mosquitoes within the study area. Using a completely randomised design, mosquito traps were set at different locations in a rural and an urbanised community. One hundred and eighty (180) mosquitoes were trapped and pooled on the basis of genus, sex and site of collection, because there have been no earlier reports of Wolbachia isolated from Nigeria. Twenty pools, made up of not more than ten mosquitoes per pool, were homogenised and analysed for Wolbachia-specific DNA. Mosquitoes were trapped within Ede (urbanised community) and Akoda (rural community). Genomic DNA was extracted from trapped mosquito samples and used as a template in a PCR reaction. The Wolbachia sp. specific 16S rRNA gene was amplified, sequence analysis of PCR products was performed and a chromatogram of the sequence was subjected to Basic Local Alignment Search Tool analysis to identify the Wolbachia sp. This sequence was subsequently submitted to GenBank with accession number MK127541. The first evidence of the presence of the endosymbiont, Wolbachia in field-caught mosquitoes is hereby documented. The homology of this strain of Wolbachia bears similarities to those reported recently from other parts of West Africa and forms a single clade with a Wolbachia sp. from Mali, with a strong bootstrap support of 99%. This finding of a Wolbachia strain in mosquitoes at Ede could form the basis for more searches for diverse strains of Wolbachia in Nigeria.     

河南省肉鸡4株禽传染性支气管炎病毒的分离鉴定及S1基因序列分析

通过病料接种SPF鸡胚和鸡胚尿囊液的RT-PCR鉴定,于2017至2018年从河南省不同发病鸡场分离到4株鸡传染性支气管炎病毒(IBV),分别命名为HB/L1/201711、ZMD/L2/201704、SQ/L3/201803、LY/L4/201710,并对4株毒株S1基因进行克隆和序列分析。结果:HB/L1/201711、SQ/L3/201803 S1基因全长1 620 nt,编码540 aa,其裂解位点分别为HRRRR,分属于基因型V、Ⅰ分支;ZMD/L2/201704、LY/L4/201710株S1基因全长1 617 nt,编码539 aa,其裂解位点为RRSRR,属于基因型Ⅱ分支。ZMD/L2/201704与LY/L4/201710分离株核苷酸序列及其推导的氨基酸序列同源性较高,分别为97.6%、95.4%,与另外2株分离株之间核苷酸序列同源性为76.5%、76.8%。4株分离株与国内外参考毒株及疫苗株的氨基酸序列同源性在58.5%~98%之间,具有较大的差异性。其中:ZMD/L2/201704、LY/L4/201710与491型传支疫苗氨基酸同源性较高,可达95.4%、95.9%;SQ/L3/201803与CHI分支参考毒株氨基酸同源性在94.6%~98.9%之间;HB/L1/201711与TWⅠ型毒株2575/98、3468/07有较高同源性,分别为94.8%和93.5%。本研究表明河南省肉鸡鸡群鸡传染性支气管炎病毒基因型相对复杂,推测存在重组与突变。     

中美猪肉产业互补性对双边猪肉贸易的影响分析

中美两国猪肉产业资源禀赋和生产率存在显著差异,双边猪肉贸易不平衡,产业互补性和贸易潜力有待提升。为研究中美两国猪肉产业互补性问题,本文以双边猪肉产业互补性指数为核心解释变量,对两国猪肉贸易引力模型进行了估计。结果显示:中美两国猪肉产业互补性指数对双边猪肉贸易有着正的影响;中美两国猪肉贸易潜力巨大,双边猪肉贸易具有很大的提升空间。在中美贸易纠纷逐步解决的背景下两国应加强猪肉产业合作,提高双边猪肉贸易互补水平。     

微生物菌群培养组学在动物医学中的应用

实验室条件下可培养的微生物约占自然界中微生物总数的1%,这限制了人们对99%未知微生物的认识和利用,而研究表明,那些“不可培养的微生物”是可以被开发和利用的,未能被纯培养的微生物才是未知微生物的主体。微生物培养组学探索利用多种培养条件和长时间的培养,结合基质辅助激光解吸电离飞行时间质谱法（MALDI-TOF-MS）和16S核糖体RNA（rRNA）测序可以大规模鉴定各种微生物,同时利用全基因组测序和宏基因组测序手段对未知微生物进行深入分析。本文综述了国内外近年来微生物菌群培养组学在反刍动物胃肠道、禽类盲肠及家畜鼻腔微生物菌群研究中的最新进展,探讨将动物体内菌群培养组学方法应用于动物疾病防治领域的可行性。作为一个新兴的研究方法,尽管该培养组学还存在一些不够成熟的方面,但它的发展前景十分广阔,微生物菌群培养组学方法和其他研究方法的互补已经逐渐成为发展兽医微生物学新的突破口。     

一株猪流行性腹泻病毒的分离鉴定和遗传进化分析

从陕西地区26个疑似猪流行性腹泻病毒感染的猪场,采集发病仔猪的肛门拭子、粪便以及死亡仔猪的小肠,将其接种于Vero细胞,在添加胰酶的情况下,连续传代培养并观察,直至细胞出现典型的合胞体病变,经RT-PCR检测、测序、基因比对分析与动物回归实验,最终确定分离到一株PEDV病毒强毒株。经过测定毒株的S基因序列,进行序列比对分析和遗传进化分析,发现本次分离到的毒株与疫苗株CV777同源性较低,进化分支位于目前流行的PEDV G2a亚群。     

一株乳酸片球菌的筛选、鉴定及其固态发酵饲料原料的产酸分析

本研究从猪的新鲜粪便中分离纯化出一株具有较强产酸效果的乳酸菌HF14,综合形态、生理生化、16SrDNA序列分析,初步鉴定该菌株为乳酸菌片球菌(Pediococcus acidilactici)。对HF14固态发酵豆粕、麸皮、玉米粉与稻壳粉等饲料原料的产酸类别进行分析发现,产生的有机酸以L-乳酸与乙酸为主,其中,发酵玉米粉的pH最低,为3.77,L-乳酸与丙酸含量最高,分别为21.91、1.03mg/g;发酵麸皮的pH降幅最大,丁酸含量最高,为0.72mg/g;发酵稻壳粉的乙酸含量最高,为6.15mg/g,L-乳酸含量最低;发酵豆粕的各个指标居中。     

木聚糖酶产生菌的筛选鉴定及木聚糖酶基因(Xyn B)的克隆

采用富集培养、透明圈平板筛选的方法,从长期堆放青贮饲料的土壤中分离到7株木聚糖酶产生菌。选取透明圈最大的木聚糖酶产生菌X7作为基础菌,对其进行16S rRNA部分序列PCR扩增测定,经BLAST同源性分析确定X7为枯草芽孢杆菌Bacillus subtilis strain GD3b(Genebank编码:HM055602.1)。然后设计特异引物,以X7基因组为模板,对其进行Xyn B基因序列PCR扩增,扩增产物经BLAST同源性分析表明已成功克隆了X7菌株的Xyn B基因,为日后构建木聚糖酶基因酵母表达载体,培育能够分泌表达具有高活性的木聚糖酶酵母工程菌奠定了基础。