Microbial mineralization of atrazine and 2,4-dichlorophenoxyacetic acid in riparian pasture and forest soils

Microbial biomass and mineralization of atrazine [2-chloro-4(ethylamino)-6(isopropylamino)s-triazine] and 2,4-D (2,4-dichlorphenoxyacetic acid) were examined in the top 10 cm of riparian pasture soils and in the litter layer and top 10 cm of mineral soils of riparian forest ecosystems. The riparian forest litter had higher levels of active and total fungal biomass than forest or pasture mineral soils in winter, spring, and fall. Active bacterial biomass was higher in forest litter than in forest and pasture mineral soils in spring and autumn, and higher in forest mineral soils than in pasture soils in summer. Total bacterial biomass was higher in forest mineral soils than in pasture soils during all seasons. In spring, it was also higher in forest litter than in pasture soils. Atrazie and 2,4-D mineralization in pasture soils was exceeded by that in forest litter in spring and autumn and by that in forest mineral soils in summer and autumn. There was no correlation between either active or total fungal and bacterial biomass with pesticide degradation.     

Effects of organic manure and NPK fertilization on earthworm activity in an Oxisol

The effects of fertilization with N, P, K, and organic manure (alone or in combination) on earthworm populations, biomass, and casting activity were measured in a cultivated soil (organic C 1.5%, annual rainfall 2000–2300 mm). These applications of fertilizer caused significant increases in earthworm numbers, biomass, and casts. N alone or in combination with P and K also influenced these earthworm parameters significantly. The inorganic NPK fertilizer in combination with organic manure had a significantly greater effect on earthworm activities than NPK fertilizer alone, and therefore the addition of organic matter appears advisable in order to obtain maximum benefits from NPK fertilizer in this soil.     

Seasonal fluctuations in soil microbial biomass carbon,phosphorus, and activity in no-till and reduced-chemical-input maize agroecosystems

Summary The soil microbial biomass contains important labile pools of C, N, P, and S, and fluctuations in its size and activity can significantly influence crop productivity. In cropping systems where fertilizer use is reduced or eliminated and green-manure legumes are used, nutrient availability is more directly linked to C-cycle dynamics. We observed the fluctuations in microbial biomass C and P, and in microbial biomass activity over three cropping seasons in continuous maize and 2-year maize-wheat-soybean rotation agroecosystems under no-till and reduced-chemical-input management. We estimated the concentrations of microbial C and P using fumigation-incubation and fumigation-extraction techniques for the surface 20 cm of Cecil and Appling series soils (clayey, kaolinitic, thermic, Typic Kanhapludults). There were significant seasonal fluctuations in microbial C and P under all cropping systems. Generally, the magnitude of fluxes and the quantity of microbial C and P tended to be higher in reduced-chemical-input systems due to tillage and incorporation of crop, weed, and legume residues. Over 3 years, the means for microbial C were 435 under reduced-input maize; 289 under no-till maize; 374 und the reduced-input crop rotation; and 288 mg kg^-1 soil under the no-till rotation. The means for microbial P were 5.2 under reduced-input maize; 3.5 under no-till maize; 5.0 under the reduced-input rotation; and 3.5 mg kg^-1 soil under the no-till rotation. Estimates of microbial activity, derived from CO₂–C evolution and specific respiratory activity (mg CO₂–C per mg biomass C), suggest that reduced-chemical-input management may cause a larger fraction of the biomass to be relatively inactive but may also increase the activity of the remaining fraction over that in no-till. Thus in these specific systems, the turnover of C and P through the microbial biomass with a reduced chemical input to the soil may be higher than under a no-till system.     

Responses of phosphatases and arylsulfatase in soils to liming and tillage systems

This study was carried out to investigate the long‐term influence of lime application and tillage systems (no‐till, ridge‐till, and chisel plow) on the activities of phosphatases and arylsulfatase in soils at four research sites in Iowa, USA. The activities of the following enzymes were studied: acid and alkaline phosphatases, phosphodiesterase, and arylsulfatase at their optimal pH values. With the exception of acid phosphatase, which was significantly (P < 0.001) but negatively correlated with soil pH (r ranged from –0.65** to –0.98***), the activities of other enzymes were significantly (P < 0.001) and positively correlated with soil pH, with r values ranging from 0.65** to 0.99*** for alkaline phosphatase, from 0.79*** to 0.97*** for phosphodiesterase, and from 0.66*** to 0.97*** for arylsulfatase. The Δ activity/Δ pH values were calculated to determine the sensitivity of each enzyme to changes in soil pH. Acid phosphatase was the most sensitive and arylsulfatase the least sensitive to changes in soil pH. Activities of the enzymes were greater in the 0 – 5 cm depth samples than those in 0 – 15 cm samples under no‐till treatment. With the exception of acid phosphatase, enzyme activities were mostly significantly (P < 0.001) and positively correlated with microbial biomass C (C_mic), with r values ranging from 0.28 (not significant) to 0.83*** and with microbial biomass N (N_mic), with r values ranging from 0.31 (not significant) to 0.94***. Liming and tillage systems significantly affected the activities of some enzymes but not others, as was evident from the specific activity values (g of p‐nitrophenol released kg^–1 C_org h^–1).     

Long‐term effects of leguminous cover crops on microbial indices and their relationships in soils of a coconut plantation of a humid tropical region

In this study, leguminous crops like Atylosia scarabaeoides, Centrosema pubescens, Calopogonium mucunoides, and Pueraria phaseoloides. grown as soil cover individually in the interspaces of a 19‐yr‐old coconut plantation in S. Andaman (India) were assessed for their influence on various microbial indices (microbial biomass C, biomass N, basal respiration, ergosterol, levels of ATP, AMP, ADP) in soils (0–50 cm) collected from these plots after 10 years. The effects of these cover crops on . CO₂ (metabolic quotient), adenylate energy charge (AEC), and the ratios of various soil microbial properties viz., biomass C : soil organic C, biomass C : N, biomass N : total N, ergosterol : biomass C, and ATP : biomass C were also examined. Cover cropping markedly enhanced the levels of organic matter and microbial activity in soils after the 10‐yr‐period. Microbial biomass C and N, basal respiration, . CO₂, ergosterol and levels of ATP, AMP, ADP in the cover‐cropped plots significantly exceeded the corresponding values in the control plot. While the biomass C : N ratio tended to decrease, the ratios of biomass N : total N, ergosterol : biomass C, and ATP : biomass C increased significantly due to cover cropping. Greater ergosterol : biomass C ratio in the cover‐cropped plots indicated a decomposition pathway dominated by fungi, and high . CO₂ levels in these plots indicated a decrease in substrate use efficiency probably due to the dominance of fungi. The AEC levels ranged from 0.80 to 0.83 in the cover‐cropped plots, thereby reflecting greater microbial proliferation and activity. The ratios of various microbial and chemical properties could be assigned to three different factors by principal components analysis. The first factor (PC1) with strong loadings of ATP : biomass C ratio, AEC, and . CO₂ reflected the specific metabolic activity of soil microbes. The ratios of ergosterol : biomass C, soil organic C : total N, and biomass N : total N formed the second factor (PC2) indicating a decomposition pathway dominated by fungi. The biomass C : N and biomass C : soil organic C ratios formed the third principal component (PC3), reflecting soil organic matter availability in relation to nutrient availability. Overall, the study suggested that Pueraria phaseoloides. or Atylosia scarabaeoides were better suited as cover crops for the humid tropics due to their positive contribution to soil organic C, N, and microbial activity.     

Fate of gram-negative bacterial biomass in soil—mineralization and contribution to SOM

Soil microorganisms contribute to the formation of non-living soil organic matter (SOM) by metabolic transformation of plant-derived material. After cell death, their biomass components with a specific molecular character become incorporated into SOM imprinting its chemical properties, although this process has not yet been quantified. In order to elucidate the contribution to SOM formation, we investigated the fate of gram-negative bacterial model biomass (Escherichia coli usually introduced into soil with manure or feces) during incubation of soil with isotopically (¹³C) and genetically (lux gene) labeled cells. The decline of living cells was monitored by the loss of bioluminescence. The carbon turnover and mineralization was balanced by bulk soil stable isotope analysis, and the persistence of nucleic acids was investigated by PCR amplification of the lux gene. During incubation, the number of viable E. coli cells decreased rapidly (99.9% within the first 42 d) serving as substrate for other microorganisms or for the formation of SOM, and bioluminescent cells could only be detected during the first 56 d. However, the lux gene was still detected after 224 d, which indicates stabilization of DNA in SOM. Although the survival of E. coli in soil is limited, only about 65% of the added labeled biomass carbon was mineralized to ¹³CO₂ and 51% remained in soil after 224 d with an average ¹³C recovery of 117%. The amount of ¹³C found in the PLFA representative of living cells had decreased to 25% of the initial value, suggesting a proportional decrease of the ¹³C in the soil microbial biomass. The extent of this decrease is higher than the mineralization of the bulk E. coli C and thus the difference of around 25% has to be stabilized as metabolites, or in non-living SOM. The data provide evidence that the genetic information and a considerable part of the carbon from dying bacterial biomass were retained in both the soil microbial food web and in non-living SOM.     

Influence of agricultural traffic and crop management on collembola and microbial biomass in arable soil

Collembola and microbial biomass C were investigated in a field experiment with controlled agricultural traffic and crop rotation over a period of 27 months. The wheel-induced compactive efforts were applied according to management practices within the crop rotation of sugar beet, winter wheat, and winter barley. Increasing wheel traffic produced increasing soil compaction, mainly due to a reduction in surface soil porosity. Increasing soil compaction was accompanied by a decrease in microbial biomass C and the density of collembola. The influence of soil compaction on microbial biomass C was smaller than that of the standing crop. However, for collembola, especially euedaphic species, a reduction in pore space appeared to be of more importance than the effects of a standing crop. Within the crop rotation, microbial biomass C and the density of collembola increased in the order sugar beet, winter wheat, and winter barley.     

The problem of pretreatment and unintentional variations in the fumigation-extraction method for time-course measurements in the field

A control soil stored at 4°C was analyzed 38 times by fumigation-extraction during a period of 11 months to correct for variations caused by the analytical procedure. The difference in extractable C between fumigated and unfumigated samples oscillated around the average without a positive or negative trend. When data from contemporaneously extracted field samples were corrected with control soil data the variations were lowered. The deviations between corrected and uncorrected biomass C values had maxima of ±12%. Data obtained for seven dates using pre-extraction, wet-sieving, and centrifuging were compared with data obtained by the conventional procedure without any pretreatment. A negative difference from data obtained without pretreatment was found when the soil water content was decreased to 6%. The largest positive difference (+38%) was found in May during the period of highest root growth.     

Effects of tetracycline on the soil microflora: function,diversity, resistance

Background  Tetracycline is a widely used antibiotic in animal production. Significant amounts of the substance reach the soil via feces, urine and manure application. As tetracycline is a persistent compound with antibacterial activity, its presence in soil may have undesired direct and indirect effects. These have been investigated so far focusing on effects on selected microbial functions. Objectives  The aim of the present study was to obtain comprehensive information on potential effects of tetracycline on the soil microflora under environmentally relevant conditions. The investigations included function and structure of the microbial biocoenosis and the distribution of resistance genes. Methods  Pig manure rich in tetracycline resistance genes was applied to a sandy soil. This soil as well as an unamended soil were additionally treated with several concentrations of tetracycline. The spiked soils were incubated in outdoor lysimeters for several months. Substrate induced respiration, PLFAs, ten selected resistance genes, and the concentrations of tetracycline were determined. Results  The test concentrations, though far exceeding environmental relevance, caused only small effects. An establishment of resistance could not be detected. Applied resistance genes were not detectable at the end of the study even in the presence of added tetracycline. Conclusion  Due to the high sorption capacity of the antibiotic, environmentally relevant concentrations of tetracycline do not seem to cause undesired effects on the soil microflora.