低压管道环状管网水力计算

本文对环状管网运行中仅开启一个出水口的水力计算方法进行了探讨。计算出了特征长度系数、平均特征长度系数和最大特征长度系数,并将其排成数表供直接查用。同时计算出了双环管网平均和最大特征长度系数的回归方程,经比较,本文提出的计算方法简单、可靠,便于设计中应用。     

黔北麻羊MSTN基因的多态性分析

为给黔北麻羊品种遗传资源的保护及进一步选育提供科学依据,利用BsmAI、MspI、EcoRI、MvaI、XmnI、MnII等6种限制性内切酶对黔北麻羊MSTN基因部分内含子1、2和外显子2进行PCR-RFLP多态性分析。结果表明:在扩增的MSTN基因1 241bp序列中含有BsmAI、EcoRI、MvaI和MnII 4个酶切位点,但均不具有多态性;未发现MspI和XmnI酶切位点。     

Establishing an eyeball-weight relationship for Litopenaeus vannamei using machine vision technology

This study aimed to establish a shrimp eyeball-weight relationship model for Litopenaeus vannamei using machine vision technology. A total of 295 shrimp were sampled from a recirculating aquaculture system (RAS). The long-axis length (d), body length (L), and body weight (W) of each individual was measured. The long axis length of the shrimp eyeball was identified and measured using machine vision technology. Continuous fitting and piecewise fitting models were used to construct the eyeball-weight relationship model for L. vannamei. The continuous fitting relationship model was described as: W = 38.865d^2.7914, while the piecewise model was described as: d < 2 mm, W = 0.0326d^3.7363, R² = 0.9288; 2 mm ≤ d < 3.9 mm, W = 0.0401d^3.104, R² = 0.9629; 3.9 mm ≤ d < 5.8 mm, W = 0.0421d^3.0311, R² = 0.9216; 5.8 mm < d, W = 0.103d^2.6226, R² = 0.9457. The root mean square error (RMSE) of the piecewise fitting model (0.0244, 0.1575, 0.5034, 0.7072) was smaller than the continuous fitting model (0.8229). The correlation coefficient (R²) of the piecewise model (0.9288, 0.9629, 0.9216, and 0.9457) was similar to that of the continuous fitting model (R² = 0.9621). The results indicated that the piecewise fitting model is suitable for calculating the biomass of L. vannamei in RAS and provides a novel way of estimating the biomass of L. vannamei cultured in RAS. The piecewise fitting model can also provide the foundation of evaluating the production of shrimp using underwater image recognition in intelligent aquaculture systems.     

Repeatability of fin length measurements using digital image analysis and studies of fin erosion as indicator of social interactions in Atlantic cod (Gadus morhua)

The aims of this study were to examine fin erosion caused by social interactions between Atlantic cod (Gadus morhua) juveniles, and to evaluate the repeatability of recorded fin length using digital image analysis (DIA). Fin length of 2100 juvenile Atlantic cod was analysed using DIA, during a 6 weeks experiment. The lengths of the three dorsal fins and the caudal fin were measured by three different assessors (M, K, B) three times during the experiment. Repeatability was based on a sub set of data from 42 randomly chosen fish. Assessor M measured the length of the fins of the 42 fish three times (M1, M2, M3). M1 and M2 were done on the same day, while M3 was conducted 2 weeks later. Assessor K measured two times with a 2‐year interval, and assessor B measured the fin length only once. The correlations between replicated measurements within assessor were highest for assessor M measured on the same day indicating an effect of memory. Repeatability of fin length ranged from 0.57 to 0.73 for the four fins. Social interaction with respect to fin erosion was studied using data on the four fins from all 2100 fish. ‘Relative fin length’ (fin length/total body length × 100) was calculated to assess fin erosion. Results indicated that all four fins were eroded due to social interactions, but the caudal fin was most severely eroded. In conclusion, DIA can be used to measured fin length but the method could be improved by using chromatic pictures.     

利用GoldenGate分析的高通量SNP芯片对鲤基因进行分型

单核苷酸多态性(SNPs)标记在大多数物种基因组中数量巨大且分布均匀,是许多水产物种遗传研究的理想标记,因此快速发展了几种高通量、快速的SNP标记分型平台。本研究利用Golden Gate分析技术对鲤Cyprinus carpio转录组测序的1 536个SNP标记合成了一张中等密度SNP芯片,对5个鲤群体的480份样本进行基因分型。结果表明:1 235个SNP标记成功分型,约占80%;915个标记至少在一个家系中呈现多态性,占74.1%;标记最小等位基因频率(MAF)介于0.05~0.5之间,平均为0.334,其中48.9%的标记最小等位基因频率(MAF)大于平均值;5个群体中SNP标记平均多态性信息含量(PIC)在0.3左右,为中度多态,杂合度为0.010~0.990,平均为0.5左右,暗示群体具有丰富的遗传多态性,育种价值及性状改良潜力很大。本研究分型的多态性SNP标记可广泛应用于遗传多样性研究、标记-性状关联分析以及分子标记辅助育种。     

Characterization of Genomic Integration and Transgene Organization in Six Transgenic Rapeseed Events

To characterize the DNA rearrangement of both the T-DNA region and the genomic insertion site during T-DNA insertion, the Genomewalker strategy was used to isolate the junctions between the inserted DNA and the plant genomic DNA in six rapeseed events as well as the genomic DNA at the sites before integration. During transformation in each of the six events, portions of both the right border（RB） and left border（LB） regions of the T-DNA were deleted, ranging from a 7 nucleotide deletion of the LB repeats in event RF1 to a 207 bp deletion of the LB region in event RF2. For the six events, T-DNA integration resulted in a deletion at the target site spanning less than 100 bp. Sequence analysis indicated that the T-DNA was integrated into the coding region of various native rapeseed genes in events RF1 and RF2. Duplications of the genomic DNA target site were observed in events RF2, RF3 and Topas 19/2. And multimerization of transgenes was found in event Topas 19/2, in which, the T-DNA was integrated as a head-to-head（RB-to-RB） concatemer into the recipient genome. In event MS1, chromosomal translocation or a large target-site deletion may have occurred during T-DNA integration, which was identified due to a failure to amplify the presumptive insertion site based on the flanking rapeseed DNA sequences. Our results provide comprehensive data concerning transgene organization and the genomic context of the T-DNA in six rapeseed events, which can aid in the developing of insert fingerprinting and the monitoring of long-term genetic stability and potential unintended effects of transgenic events.     

牙鲆微卫星标记的开发及多态性分析

将牙鲆基因组DNA经限制性内切酶RsaⅠ和BstUI双酶切后采用FIASCO法构建酶切片段基因组文库。共挑取269个克隆,177个为阳性克隆,阳性克隆率为65.79%。经测序后获得191条微卫星序列,其中完美型占74.35%;非完美型占14.66%;混合型占10.99%。用引物设计软件Primer Premier 5.0设计引物153对,挑选其中的50对合成并在32个野生牙鲆个体中进行扩增,共31个位点具有多态性,统计结果后使用POPGENE软件进行分析,平均等位基因个数为3.939 4,平均有效等位基因数为3.052 2,平均观测杂合度为0.650 1,平均期望杂合度为0.586 6,各引物的Hardy-Weinberg平衡指数在0.012 587~0.984 917变动。这些筛选出的多态性微卫星标记可应用于进一步的牙鲆遗传多样性分析、家系分析及遗传图谱的构建等工作中。     

流沙湾养殖华贵栉孔扇贝体色多态性研究

对雷州半岛西部流沙湾养殖的华贵栉孔扇贝（Chlamys nobilis）群体进行了体色多态性研究。结果显示,在调查的10个苗种来源不同、总抽样数量为5 954个个体的养殖群体中,壳色可分为6类,分别是橘黄色（62.31%）、枣褐色（14.51%）、紫白色（12.46%）、橘黄间紫色（6.43%）、紫顶枣褐色（3.46%）和黄顶紫黄色（0.82%）;6类壳色群体的闭壳肌颜色均存在白、黄2色,且白色比例均显著高于黄色,其中黄色闭壳肌比例最高的是橘黄色（18.79%）;华贵栉孔扇贝成熟的生殖腺颜色分为黄、乳白2色,分别代表雌性和雄性,性比与闭壳肌颜色相关。研究表明,华贵栉孔扇贝壳色以橘黄色为主（P〈0.05）,闭壳肌颜色以白色为主（P〈0.05）;壳色与闭壳肌颜色存在一定的相关性,带“黄”壳色个体黄色闭壳肌比例较高（P〈0.05）;黄色闭壳肌群体雌性比例显著高于雄性（P〈0.01）。     

Tailoring codend mesh size to improve the size selectivity of undifferentiated trawl species

Tiger flathead, Neoplatycephalus richardsoni (Castelnau), and sand flathead, Platycephalus bassensis Cuvier, are undifferentiated and managed with a common legal minimum length (LML). The Commonwealth Trawl Sector (CTS) and the Tasmanian Danish‐seine fishery (TDSF) use a minimum codend mesh sizes of 90 and 70 mm, respectively. The codend mesh size should be tailored to the LML, which is based on the length of first maturity of females (M₅₀). This study found the length–girth relationship of N. richardsoni and P. bassensis was not significantly different. Using the covered codend method, these two species had 50% retention lengths (L₅₀) of 294 ± 2 and 307 ± 3 mm, in 70‐mm and 90‐mm codends, respectively. L₅₀ estimates for mesh sizes from this study and others produced a curvilinear relationship: y = 120 ln(x) ? 214, with an r² of 0.8504. The size at maturity (M₅₀) for female N. richardsoni was 337 mm, which is larger than the estimate for female P. bassensis (247 mm). There is a mismatch between the estimates of L_50, the estimates of M₅₀ and the LMLs in each fishery, leading to suboptimal exploitation of female Platycephalus. The model produced in this paper recommends a codend mesh size of 98 mm for both fisheries to exploit Platycephalus species sustainably.