Genetic bases of source-,sink-,and yield-related traits revealed by genome-wide association study in Xian rice

The source-sink relationship determines the ultimate grain yield.We investigated the genetic basis of the relationship between source and sink and yield potential in rice.In two environments,we identified quantitative trait loci(QTL)associated with sink capacity(total spikelet number per panicle and thousand-grain weight),source leaf(flag leaf length,flag leaf width and flag leaf area),source-sink relationship(total spikelet number to flag leaf area ratio)and yield-related traits(filled grain number per panicle,panicle number per plant,grain yield per plant,biomass per plant,and harvest index)by genome-wide association analysis using 272 Xian(indica)accessions.The panel showed substantial variation for all traits in the two environments and revealed complex phenotypic correlations.A total of 70 QTL influencing the 11 traits were identified using 469,377 high-quality SNP markers.Five QTL were detected consistently in four chromosomal regions in both environments.Five QTL clusters simultaneously affected source,sink,source–sink relationship,and grain yield traits,probably explaining the genetic basis of significant correlations of grain yield with source and sink traits.We selected 24 candidate genes in the four consistent QTL regions by identifying linkage disequilibrium(LD)blocks associated with significant SNPs and performing haplotype analysis.The genes included one cloned gene(NOG1)and three newly identified QTL(qHI6,qTGW7,and qFLA8).These results provide a theoretical basis for high-yield rice breeding by increasing and balancing source–sink relationships using marker-assisted selection.     

Increasing the appropriate seedling density for higher yield in dry direct-seeded rice sown by a multifunctional seeder after wheat-straw return

Dry direct-seeded rice(DDR) sown using a multifunctional seeder that performs synchronous rotary tillage and sowing has received increased attention because it is highly efficient, relatively cheap, and environmentally friendly. However,this method of rice production may produce lower yields in a rice–wheat rotation system because of its poor seedling establishment. To address this problem, we performed field experiments to determine the rice yield at five seedling density levels(B1, B2, B3, B4,...     

Calibration of Hargreaves–Samani equation for estimating reference evapotranspiration in semiarid and arid regions

The Penman–Monteith (FAO-56 PM) equation is suggested as the standard method for estimating evapotranspiration (ET₀) by the International Irrigation and Drainage Committee and Food and Agriculture Organization (FAO). On the other hand, the Hargreaves–Samani (HS) equation is an alternative method compared with the FAO-56 PM equation. In the present study, the original coefficient C of the HS equation is calibrated based on the FAO-56 PM equation for estimating the reference ET₀ from 15 meteorological stations in central Iran (about 170,000 km²) under semiarid and arid conditions. After calibration, the new values for C are ranged from 0.0018 to 0.0037. The mean bias error (MBE), the root mean square error (RMSE), and the ratio of average estimations of ET₀ (R) values for all stations are ranged from 0.12 to 5.38, ?5.35 to 1.15 mm d^?1 and 0.64 to 1.28 for the HS equation and from 0.12 to 2.48, ?2.2 to 0.60 mm d^?1, and 1.00 to 1.05 for the calibrated Hargreaves–Samani equation (CHS), respectively. Results indicate that the average RMSE and MBE values are decreased by 40% and 66%, respectively. Relationships for calibrating the C coefficient on the basis of annual average of daily temperature range (ΔT) and wind speed (V) are proposed, calibrated, and validated. Hence, the CHS equation can be used for ET₀ estimates with acceptable accuracy instead of the FAO-56 PM method.     

A Computer Program for Automatic Watering Based on Potential Evapotranspiration by Penman Method and Predicted Leaf Area in Miniature Pot Rose Production

In this study, we developed a computer program for automatic prediction of watering time point by considering the environmental factors such as solar radiation, air temperature and relative humidity based on the multiple linear regression equation of leaf area and Penman Method. The experiments were carried out for a year in two watering experimental plots, one of which was controlled by pF value, and the other by the computer program. After comparing the results of the two plots, the following findings were obtained. In the computer program plot, the observed and predicted values of both leaf area and evapotranspiration indicated significant correlation at the 1% level, which suggested that the computer program had high prediction accuracy. In addition, no significant difference was observed between the two experimental plots with respects to the plant height, plant diameter, leaf area, leaf number, fresh weight, and dry weight, which demonstrated that the plants in the computer program plot had normal growth. On the other hand, although the number of flower buds and flowering shoots showed higher values at the end of certain cultivations in the computer program plot than those in pF value plot, we proposed that it was due to the effect of cumulative daily solar radiation in the greenhouse, rather than the watering. Thus, we have reached the conclusion that the computer program for automatic prediction of watering time point developed by this study has high applicability in miniature pot rose production.     

Failure criterion for timber beams loaded in bending,compression and shear

Abstract

Based on the elastic–plastic strength calculation, necessary for precise data explanation, a derivation is given of the failure criterion for combined bending, compression and shear. This exact limit state criterion should replace the unacceptable unsafe criteria of Eurocode 5 (EN 1995-1-1:2004). It is shown that the principle used thus far, of limited “flow” in axial compression as a determining failure criterion, for example, predicting no influence of a size effect, does not hold. Instead, it is derived and confirmed by the data that bending tension failure is always determining, showing the existence of a size effect, and correction of the existing calculation method is therefore necessary. Because of the primary importance of the size effect for the strengths, also for combined bending–compression, a simple derivation of the size effect design equations is given and discussed in an appendix.     

Near-shore distribution of Heaviside’s (Cephalorhynchus heavisidii) and dusky dolphins (Lagenorhynchus obscurus) at the southern limit of their range in South Africa

Photo-identification surveys over three years along 390 km of coastline north of Cape Town, revealed that Heaviside’s dolphin distribution was consistent between years and higher in areas more exposed to swells and with greater long-term availability of small hake Merluccius capensis (their principal prey). Dusky dolphin sighting rates varied considerably between years, but were generally higher in areas with lower hake availability and sandier shores (mostly straighter coastline). Large groups of 50–200 dusky dolphins were only seen in St Helena Bay, the site of a wind-driven upwelling zone. Heaviside’s dolphins were found in shallower, cooler water than dusky dolphins and were more likely to be seen during brighter phases of the moon (when nocturnal light conditions may influence the vertical migration patterns of prey) and in areas of high hake abundance. Near-shore fishing activity was higher in the northern half of the study area and clustered around harbours. Set netting occurred only at Yzerfontein and St Helena Bay, but due to changes in the industry is currently thought to be a low threat to the population. Interactions between Heaviside’s and dusky dolphins were usually neutral and sympatry appears to be mediated by differences in overall range and the type and size of prey species taken.     

Efficacy of condensed tannins against larval Hymenolepis diminuta (Cestoda) in vitro and in the intermediate host Tenebrio molitor (Coleoptera) in vivo

Natural anti-parasitic compounds in plants such as condensed tannins (CT) have anthelmintic properties against a range of gastrointestinal nematodes, but for other helminths such effects are unexplored. The aim of this study was to assess the effects of CT from three different plant extracts in a model system employing the rat tapeworm, Hymenolepis diminuta, in its intermediate host, Tenebrio molitor. An in vitro study examined infectivity of H. diminuta cysticercoids (excystation success) isolated from infected beetles exposed to different concentrations of CT extracts from pine bark (PB) (Pinus sps), hazelnut pericarp (HN) (Corylus avellana) or white clover flowers (WC) (Trifolium repens), in comparison with the anthelmintic drug praziquantel (positive control). In the in vitro study, praziquantel and CT from all three plant extracts had dose-dependent inhibitory effects on cysticercoid excystation. The HN extract was most effective at inhibiting excystation, followed by PB and WC. An in vivo study was carried out on infected beetles (measured as cysticercoid establishment) fed different doses of PB, HN and praziquantel. There was a highly significant inhibitory effect of HN on cysticercoid development (p = 0.0002). Overall, CT showed a promising anti-cestodal effect against the metacestode stage of H. diminuta.     

Source–sink relations and responses to sink–source manipulations during grain filling in wheat

The source–sink ratio during grain filling is a critical factor that affects crop yield in wheat, and the main objective of this study was to determine the source–sink relations at both the canopy scale and the individual culm level under two nitrogen (N) levels at the post-jointing stage.  Nine widely-used cultivars were chosen for analyzing source–sink relations in southwestern China; and three typical cultivars of different plant types were subjected to artificial manipulation of the grain-filling source–sink ratio to supplement crop growth measurements.  A field experiment was conducted over two consecutive seasons under two N rates (N+, 150 kg ha^–1; N–, 60 kg ha^–1), and three manipulations were imposed after anthesis: control (Ct), removal of flag and penultimate leaves (Lr) and removal of spikelets on one side of each spike (Sr).  The results showed that the single grain weights in the three cultivars were significantly decreased by Lr and increased by Sr, which demonstrated that wheat grain yield potential seems more source-limited than sink-limited during grain filling, but the source–sink balance was obviously changed by climatic variations and N deficient environments.  Grain yield was highly associated with sink capacity (SICA), grain number, biomass, SPAD values, and leaf area index during grain filling, indicating a higher degree of source limitation with an increase in sink capacity.  Therefore, source limitation should be taken into account by breeders when SICA is increased, especially under non-limiting conditions.  Chuanmai 104, a half-compact type with a mid-sized spike and a long narrow upper leaf, showed relatively better performance in source–sink relations.  Since this cultivar showed the characteristics of a lower reduction in grain weight after Lr, a larger increase after Sr, and a lower reduction in post-anthesis dry matter accumulation, then the greater current photosynthesis during grain filling contributed to the grain after source and sink manipulation.      

Predicting summer fin whale distribution in the Pelagos Sanctuary (north-western Mediterranean Sea) to identify dynamic whale–vessel collision risk areas

1. Mediterranean fin whales aggregating in the Pelagos Sanctuary in summer to feed are exposed to vessel collision risk, particularly from high-speed ferries.
2. This study developed models to predict summer fin whale distribution using a generalized additive model (GAM) and MaxEnt, with the aim of providing a tool to identify potential high whale–ferry collision risk areas along ferry routes within the Pelagos Sanctuary during summertime.
3. Models were trained using sightings data collected in the summer months of 2009–2018 on board ferries crossing the central area of the Pelagos Sanctuary. Environmental predictors were bathymetry and mean sea surface chlorophyll concentration of the annual spring bloom period.
4. The predictive ability of GAM and MaxEnt was assessed using existing knowledge of summer fin whale distribution in the region. GAM (deviance explained = 20.2%) predictions matched documented distributions more closely than that of MaxEnt, with highest predicted fin whale occurrence in deep offshore waters (>2000 m) encompassing the central north-western and western regions, and in the south-eastern region, consistent with known fin whale habitats within the Pelagos Sanctuary. Inter-annual variability was evident, influencing collision risk areas.
5. Collision risk was estimated as a function of the overlap between the predicted probability of fin whale occurrence and ferry density estimated from Automated Identification System data. Ferry routes that cross the northern and eastern regions of the Pelagos Sanctuary presented relatively higher collision risk.
6. Areas with changes in risk intensity between the years were temporally and spatially dynamic: some appeared intermittently throughout the study period while others persisted over consecutive years or recurred in different years.
7. Due to the vastness of the Pelagos Sanctuary, vessel speed reduction maybe a more practical measure to manage collision risk than re-routing shipping lanes. A combination of Seasonal Management Areas and Dynamic Management Areas approaches could be adopted for high-risk areas.

     

Stewardship as a Path to Cooperation? Exploring the Role of Identity in Intergroup Conflict Among Michigan Wolf Stakeholders

Post-recovery wolf management remains controversial. In Michigan, dialogue centers on hunting wolves but controversy may be more nuanced than simple pro- or anti-hunting positions. Social identity may cause stakeholders to organize in groups and identity differences may be driving controversy. To explore stakeholder disagreement over wolf management, we conducted semi-structured key informant interviews (n = 21) about identity and stewardship in August–September 2012. Four overarching identity themes emerged regarding: (a) management objectives, (b) focal levels, (c) control methods, and (d) justifications for methods. Themes indicated two main researcher-defined identity groups. Interviewees from both groups identified six common stewardship themes: (a) bequest values, (b) ecosystem health, (c) education, (d) existence values, (e) pride in natural resources, and (f) sustainability. Findings suggest stakeholders may be conflicting over opposing identities vis-à-vis organization affiliation, which may be related to what management strategies individuals oppose. Establishing common stewardship objectives through established participation methods may help alleviate controversy.