牙鲆养殖群体遗传变异的微卫星标记研究

应用10对微卫星引物对中国牙鲆一个养殖群体的30个个体进行了群体遗传结构分析。结果显示，微卫星标记比其他标记具有更高的多态性，10个微卫星座位的等位基因数在4～10之间，有效等位基因数在2．23～5．82之间，平均等位基因数为7．6，群体平均杂合度为0．6960，Hardy-weinberg遗传偏离指数的平均值为0．1774。     

西南大西洋阿根廷滑柔鱼遗传多样性的微卫星分析

西南大西洋阿根廷滑柔鱼(Illex argentinus)是重要的经济大洋性头足类,其种群结构较为复杂。本研究采用8个微卫星标记,对西南大西洋阿根廷滑柔鱼群体的遗传多样性进行了检测。8个基因座位上,共检测出172个等位基因,每个基因座位检测到10～30个等位基因不等。8个位点的平均观测等位基因数为21.500 0,平均有效等位基因数为12.074 1。各位点的观测杂合度(Ho)变化范围为0.300 0～0.775 0,期望杂合度(He)为0.484 2～0.977 0,平均观测杂合度为0.504 6,平均期望杂合度为0.873 4。8个微卫星位点的多态信息含量(PIC)平均值为0.853 6。以卡方检验估计Hardy-Weinberg平衡,发现8个基因座位均不符合Hardy-Weinberg平衡。Fst分析显示该群体无明显的遗传分化。研究结果揭示:西南大西洋阿根廷滑柔鱼种群显示了高水平的微卫星多态性,该海域阿根廷滑柔鱼群体的遗传多态性水平在经历了近十年的密集捕捞压力后没有明显的变化,同时证明微卫星分子标记是研究该物种自然种群的有利工具。     

大黄鱼22个微卫星标记在F1家系中的分离方式及与生长性状的相关分析

研究了1个大黄鱼F1家系150个个体22个微卫星位点的基因型分布,并分析了标记位点与生长性状的相关性。结果显示,22个位点共检测到60个等位基因,平均等位基因数为2.73,平均有效等位基因数为2.37;平均观测杂合度与期望杂合度分别为0.75和0.73,部分位点基因型分布严重偏离孟德尔定律,暗示其可能与适应性基因相连锁,其中LYC0446位点附近可能存在隐性纯合致死基因。LYC0077位点与体质量、体长和体高均呈显著相关(P<0.05),其中等位基因A(165 bp)对应的生长性状表型值最大,可以作为选育快长性状的有效分子标记;LYC0015和LYC0243与体高呈显著相关(P<0.05),与体长、体质量的相关不显著(P>0.05),LYC0015位点的等位基因C(110 bp)和LYC0243位点的等位基因A(160 bp)为有利的等位基因。对LYC0015、LYC0077和LYC0243进行不同基因型个体表型值的多重比较,找到3种对生长性状有利的基因型,分别为BC、AA和AB。同时,以体质量性状为参照,对3个位点不同基因型组合进行比较,找到一个最优基因型组合(BC/AA/AB),与3个位点单独分析对应的最优基因型完全一致,符合加性作用模型。     

富集文库－菌落原位杂交法筛选栉孔扇贝的微卫星标记

应用微卫星富集文库─菌落原位杂交法,筛选得到了40个栉孔扇贝的微卫星标记.用固定了(AG)15和(AC)15探针的尼龙膜(Hybond N )捕捉含有微卫星DNA的片段,经洗脱、PCR扩增和TA克隆,构建栉孔扇贝的微卫星富集文库.利用ECL试剂盒(Amersham公司)标记的(AG)15和(AC)15探针进行菌落原位杂交筛选微卫星富集文库,阳性克隆经测序获得微卫星DNA.富集文库中1200个重组克隆经过菌落原位杂交后,532个(44.3%)为阳性克隆.任意挑选100个克隆测序,结果显示所有的克隆都至少含有一个微卫星位点.利用软件设计了65对特异性PCR引物,40对能扩增出清晰的带谱;利用48个栉孔扇贝个体评价微卫星位点,分析表明37个位点具有多态性.不同的位点获得的等位基因数目为2～14个不等,37个多态性位点共获得258个等位基因,平均每个位点获得7.0个等位基因.观测杂合度(Ho)、期望杂合度(He)及多态性信息含量值(PIC)的范围分别为0.1000～1.0000、0.1197～0.9831和0.1172～0.9782.结果表明,富集文库─菌落原位杂交法适合大规模筛选目标物种的微卫星标记.     

Assessment of clonal fidelity of micropropagated gerbera plants by ISSR markers

True-to-type clonal fidelity is one of the most important pre-requisites in micropropagation of crop species. Genetic fidelity of in vitro raised 45 plants of gerbera (Gerbera jamesonii Bolus) derived from three different explants, viz., capitulum, leaf and shoot tips, was assessed by 32 ISSR markers, for their genetic stability. Out of 32 ISSR markers, 15 markers produced clear, distinct and scorable bands with an average of 5.47 bands per marker. The markers designed from AG motif amplified more number of bands. The markers anchored at 3′ ends produced high number of consistent bands than unanchored markers. Fifteen ISSR markers generated a total of 3773 bands, out of which 3770 were monomorphic among all the clones. The Jaccard's similarity coefficient revealed that out of 45 clones derived from different explants, 44 were grouped into a single large cluster alongwith the mother plant with a similarity coefficient value of 1.00, whereas one clone (C38) remained ungrouped. The clones derived from capitulum and shoot tip explants did not show any genetic variation, whereas, one of the leaf-derived clones exhibited some degree of variation.     

Genetic diversity of apricot revealed by a set of SSR markers from linkage group G1

Eight polymorphic simple sequence repeat (SSR) markers located in the G1 linkage group of apricot (Prunus armeniaca L.) were previously developed and evaluated in a small set of cultivars. Those primers were used for studying variability in 77 apricot cultivars belonging to five different geographical groups, such as Chinese, Asian (Irano-Caucasian and Central Asian), North American, Mediterranean and Western European as well as Middle European cultivars. Six of the markers were polymorphic and revealed a total of 71 alleles ranging from 5 (aprigms11) to 20 (aprigms1) alleles per locus with a mean value of 11.83 alleles per locus. In conclusion, the SSR loci located in the G1 linkage group show a level of polymorphism which is similar to loci dispersed throughout the entire genome. The total number of alleles and the number of unique alleles were the highest in Chinese apricots and the lowest in Middle European cultivars. Heterozygosity also showed a decrease from Asia and China to Middle Europe. No association could have been observed between any SSR markers tested and plum pox virus (PPV) resistant phenotype of cultivars. PPV resistant cultivars did not form a separate clade on the dendrogram obtained by UPGMA cluster analysis. Middle European and Chinese cultivars formed separate clusters while other genotypes formed smaller multiple sub-groups or scattered among different clusters. Our results support previous hypotheses on the origin of PPV resistance in North American apricots. The allele data was also presented in a form that allowed the easy observation of allele frequencies in each geographical group at each locus. Using this data field, differences and similarities between cultivar groups can be easily assessed. The analysis demonstrated the links between the North American and Mediterranean apricot germplasm and confirmed that the Chinese and Eastern European cultivars are distantly related.     

核果类果树遗传连锁图谱的研究进展

遗传连锁图谱构建是基因组研究中的重要环节,是基因定位与克隆乃至基因组结构与功能研究的基础。近20a来,分子生物学特别是分子标记技术的飞速发展为高饱和核果类遗传连锁图谱的构建和利用奠定了基础。目前国内外已经公布十几张核果类的遗传连锁图谱,但这些图谱均有不同的缺陷。因此,我们就核果类遗传连锁图谱的构建进展、性状的QTL定位及比较图谱应用进行了综述,并探讨了核果类遗传连锁图谱研究的前景和存在的问题。     

抗条锈病小麦-滨麦Lm#3Ns二体异附加系的分子细胞遗传学鉴定

滨麦(Leymus mollis)是小麦的三级基因源,具有改良小麦所需的许多优良性状。为了将滨麦中的优异基因导入到普通小麦中,通过远缘杂交获得小麦-滨麦异附加系、异代换系、易位系,以选自普通小麦7182与滨麦衍生后代M42(2n=54)F_6代的株系M11005-1-2-7-10-1-1(M11005A)为供试材料,对其进行了形态学、细胞学、原位杂交、分子标记、抗病性等综合鉴定。细胞学观察结果显示,M11005A有44条染色体且配对良好,可以稳定遗传。原位杂交及分子标记结果表明,M11005A含有42条普通小麦染色体和1对来自滨麦Lm#3Ns的染色体,并且用Oligo-pTa535探针得到了Lm#3Ns的FISH核型;筛选出6个EST及8个PLUG特异分子标记可以用来鉴定Lm#3Ns染色体,其中只有1个EST和4个PLUG标记可以同时在M11005A中扩增出滨麦和华山新麦草的条带,说明滨麦的Lm#3Ns染色体与华山新麦草的3Ns基因组之间存在差异。M11005A的穗长、穗型、小穗数、千粒重与亲本7182无显著差异,但分蘖数较7182显著增加,株高显著降低。抗条锈病鉴定结果显示,苗期M11005A对条锈菌生理小种CYR29和CYR34表现高抗,对CYR32表现高感,成株期对CYR32和CYR33混合小种表现高抗,推测滨麦的Lm#3Ns染色体携带对CYR29和CYR34小种的抗性基因,又携带了成株期对CYR32和CYR33的抗性基因。因此,M11005A可以作为抗源应用于小麦的条锈病抗性改良中。     

大豆品种郑97196对疫霉根腐病的抗性遗传分析及基因定位

由大豆疫霉引起的大豆疫霉根腐病是一种世界性大豆病害,对产量品质影响极大。利用抗病品种进行防治是目前最经济、有效的方法。大豆对疫霉菌株的抗性分为由单基因控制的完全抗性和由多基因控制的部分抗性两种。以对多个大豆疫霉生理小种具有抗性的大豆品种郑97196作为抗性亲本与大豆感病品系X242003杂交构建F_(2∶3)重组自交家系群体,用大豆疫霉菌株He N35对亲本及F_(2∶3)群体进行抗性遗传分析并利用SSR技术对郑97196的抗性基因进行定位。结果表明:郑97196对大豆疫霉抗性是由一对显性单基因控制的,抗病对感病表现为显性,再用9种毒力公式不同的疫霉菌株分别接种郑97196和14个国内外公认的含有单个抗病基因的大豆品种(鉴别寄主),观察并记录抗性反应类型,结果显示郑97196的抗性反应类型与14个鉴别寄主有所不同,推测其可能含有新的抗病基因,暂命名为Rps Zheng。通过SSR分子作图分析,该基因位于大豆分子遗传图谱N连锁群上satt485和satt584之间,与这两个标记之间的距离分别为2.1和3.7cM。     

抗条锈病普通小麦-滨麦6BS·6NsS附加易位系的分子细胞遗传学鉴定

易位系是向小麦转移外源种属优异基因的重要种质资源。普通小麦-滨麦衍生系M13063A-1由小麦-滨麦第六部分同源群二体异附加系材料连续自交获得。为了给普通小麦-滨麦衍生系M13063A-1的利用提供依据,本研究利用形态学、细胞学、原位杂交、分子标记等技术,对该材料进行了鉴定。细胞学鉴定结果显示,M13063A-1有丝分裂中期染色体数目为44条,减数分裂中期I染色体构型为2n=22Ⅱ,且在减数分裂后期Ⅰ可均等分离。原位杂交结果表明,M13063A-1含有42条普通小麦染色体和1对普通小麦-滨麦易位染色体,易位染色体长臂为滨麦Ns基因组染色体片段,短臂为6BS。分子标记分析确定M13063A-1携带的滨麦染色体片段为6NsS。成株期条锈病抗性鉴定显示,M13063A-1抗条锈菌生理小种条中31和条中32。因此,M13063A-1是一个抗条锈病的普通小麦-滨麦6BS·6NsS附加易位系,可以用作小麦抗病育种的桥梁材料。