Challenges in developing and implementing a decision support systems (ETÇAP) in forest management planning: a case study in Honaz and Ibradı, Turkey

Decision support systems (DSSs) are indispensable tools in preparing a forest management plan for a better combination of multiple forest values. This study attempted to develop and explain a stand-based forest management DSS (Ecosystem-based multiple-use forest planning [ETÇAP]) comprising a traditional simulation, linear programming (LP), metaheuristics and geographic information system. The model consists of five submodels; traditional management approach to handle inventory data, an empirical growth and yield model, a simulation to conceptualize management actions, a LP technique to optimize resource allocation and a simulated annealing approach to directly create a spatially feasible harvest schedule. The ETÇAP model has been implemented in a comparative two case study areas; Denizli–Honaz and Akseki–Ibrad?. Both simulation and optimization models outperformed to the traditional management plan. The periodical change of growing stock, allowable cuts, carbon sequestration and water production are used as performance indicators. The results showed that more amount of wood could be harvested over time compared to traditional level of harvesting. It could be concluded that various management strategies allowed managers to stimulate more decision options for better outputs through intertemporal trade-offs of management interventions as the model provided tools to quantify forest dynamics over time and space. Challenges exist to establish the functional relationships between forest structure and values for better quantification and integration into the management plans.     

Temperature modeling of a land-based aquaculture system for the production of Gracilaria pacifica: Possible system modifications to conserve heat and extend the growing season

Temperature control is a major cost for numerous aquaculture systems. Solar thermal engineering techniques can be used to identify inexpensive methods for conserving and capturing heat. Gracilaria pacifica, also known as the culinary ingredient ogo, is currently grown in land-based tanks at a site in Goleta, CA where influent sea water temperatures infrequently reach the 21–28 °C range that provides for optimal growth. The major objective of this study was to explore various designs of a G. pacifica tank culture system that maintain optimal water temperature year round to maximize growth. A model was constructed and calibrated by comparing results to a one-third scale pilot system operated in Davis, CA. For model calibration the most sensitive parameter such as cover optical properties were adjusted first and less sensitive parameters were adjusted later. The pilot system consisted of six tanks, three insulated with foam and a clear polyethylene cover (experimental), and three uninsulated and uncovered (controls). The model had weather data inputs including air temperature, humidity, wind speed, and solar radiation. The model was then compared to a full-scale system operated in Santa Barbara during the winter. The experimental pilot system was 4.93 °C warmer than the control pilot system under optimal weather conditions. The full-scale experimental system was 2.80 °C warmer than the control system under non-ideal conditions. The model demonstrated predictive accuracy under most weather conditions. Furthermore the model is robust enough to accept estimated values for many inputs and still produce accurate results, this suggests a simpler model may be feasible. A polyethylene cover and insulation are not sufficient in general for raising the water temperature to the optimum range during the winter; they may be during other times of the year when more solar energy is available, thereby extending the growing season.     

日粮钙水平对空怀期云南半细毛羊生长性能及血清生化指标和繁殖相关激素的影响

试验旨在探讨日粮钙水平对空怀期云南半细毛羊生长性能、配种前血清生化指标和繁殖相关激素的影响,为开展空怀期云南半细毛羊营养需要量研究提供参考。选用50只体况良好、体重相近、38月龄的经产2胎空怀云南半细毛羊,随机均分为5组,分别饲喂0.40%(无外源钙)、0.45%、0.53%、0.66%、0.85%5个钙水平的日粮。预试期14d,正试期30d。结果表明:0.53%钙水平组云南半细毛羊的总增重、平均日增重、平均日采食量、耗料增重比等指标相对优于其他组;0.40%钙水平日粮组的血清钙最高,血清碱性磷酸酶、甲状旁腺素、钙、磷组间差异不显著(P>0.05);繁殖相关激素各组间表现不一,0.40%钙水平组雌二醇水平最高(P>0.05)。在日粮磷水平为0.20%水平条件下,0.53%钙水平组的空怀期云南半细毛羊表现出较好的生长性能,可为临配种前生理生化和激素水平提供较好准备;增加日粮钙水平,未见对以上指标有明显的正向增强作用,可能与日粮钙磷比失衡有关。     

Development of IP and SCAR markers linked to the yellow seed color gene in Brassica juncea L.

Previous studies showed that the yellow seed color gene of a yellow mustard was located on the A09 chromosome. In this study, the sequences of the molecular markers linked to the yellow seed color gene were analyzed, the gene was primarily mapped to an interval of 23.304 to 29.402M. Twenty genes and eight markers’ sequences in this region were selected to design the IP and SCAR primers. These primers were used to screen a BC₈S₁ population consisting of 1256 individuals. As a result, five IP and five SCAR markers were successfully developed. IP4 and Y1 were located on either side of the yellow seed color gene at a distance of 0.1 and 0.3 cM, respectively. IP1, IP2 and IP3 derived from Bra036827, Bra036828, Bra036829 separately, co-segregated with the target gene. BLAST analysis indicated that the sequences of newly developed markers showed good collinearity with those of the A09 chromosome, and that the target gene might exist between 27.079 and 27.616M. In light of annotations of the genes in this region, only Bra036828 is associated with flavonoid biosynthesis. This gene has high similarity with the TRANSPARENT TESTA6 gene, Bra036828 was hence identified as being the gene possibly responsible for yellow seed color, in our research.     

Effects of Rice Variety and Growth Location in Cambodia on Grain Composition and Starch Structure简

The effects of variety and growth location on grain composition and starch structures were investigated using three rice (Oryza sativa L.) cultivars (Phka Romduol, Sen Pidao and IR66) with different amylose contents. All the three cultivars were planted in three different agro-climatic zones (Phnom Penh, Coastal and Plateau) of Cambodia. The protein content of polished grains increased when rice was planted at a location with higher average temperature, but their lipid content decreased. The amylose content and degree of branching were not greatly affected by the minor temperature differences among the growing locations. Starch fine structures characterized by the chain-length distribution were significantly different among the cultivars, but not significantly among different locations. The results suggested that protein and lipid biosyntheses were more sensitive to the environmental temperature than that of starch in rice grains.     

胡萝卜根中主要类胡萝卜素含量相关QTL的精细定位

以白色的野生胡萝卜‘松滋野生’(Ws)和橘色的栽培胡萝卜品种‘Amsterdam’(Af)为亲本构建的回交重组自交系(BIL)为试材,基于低倍重测序技术开发SNP标记,构建了由1 976个Bin标记组成,包含29 435个SNP标记的遗传图谱。图谱总距离834.28 c M,平均图距0.42 c M。通过对胡萝卜肉质根中类胡萝卜素含量相关QTL分析,在连锁群LG04和LG08中检测到调控α–胡萝卜素、β–胡萝卜素、ζ–胡萝卜素、叶黄素、玉米黄质和总类胡萝卜素含量的主效QTL(M-QTL)2、2、3、2、2和2个,表型贡献率为11.47%~19.18%;另检测到调控α–胡萝卜素、β–胡萝卜素、ζ–胡萝卜素、玉米黄质和总类胡萝卜素含量的上位性QTL(E-QTL)1、1、2、1和1个,表型贡献率为2.50%~3.66%。在M-QTL显著区间内共检索到36个有功能注释的预测基因,其中Dck018297为ζ–胡萝卜素脱氢酶2基因,与调控β–胡萝卜素合成和总类胡萝卜素含量有关;Dck008006为乙烯响应因子2.2的同源基因,与调控α–胡萝卜素、ζ–胡萝卜素合成有关;Dck029898为转录因子b HLH135的同源基因,与调控玉米黄质合成有关。     

基于Simulink的液压系统建模与仿真

针对农业机械中液压系统结构复杂、研发周期长等问题,通过分析农业机械中液压回路各个组成元件特性,基于Simulink构建元件动态数学模型。对液压回路进行研究,分析了液压回路在不同元件参数下的动态性能,为优化液压回路系统提供参考。     

Does sand content in spawning substrate result in early larval emergence? Evidence from a lithophilic cyprinid fish

The spawning success of lithophilic salmonids is strongly influenced by the fine sediment content (“fines”) of spawning substrates, yet knowledge on the impacts of fines on the spawning of non‐salmonid lithophiles remains limited, despite their ecological and socio‐economic importance in European rivers. Consequently, the aim here was to use an ex‐situ experiment to investigate the impact of sand content on egg survival and timing of larval emergence of the surface‐spawning cyprinid European barbel Barbus barbus. Thirty incubator boxes within a recirculating system were filled with one of five experimental sediment mixtures (0%–40% sand by mass) that each contained 300 fertilised eggs at a depth of 50 mm. Emerged, free‐swimming larvae were captured and counted daily to assess grain‐size effects on larval survival and emergence. Specifically, total proportion of emerged larvae, cumulative daily proportion of emerged larvae and time required to reach 50% emergence were measured during the study. Whilst the proportion of sand in the sediments did not have a significant impact on egg‐to‐emergence survival (mean survival per treatment 75%–79%), it significantly affected the timing of larval emergence to the water column; early emergence was detected in treatments with elevated sand content (on average, 50% emergence after 12–13 days versus 19 days in the control). Similar to findings from salmonid studies, these results suggest high sand content in spawning gravels can influence timing of larval emergence and potentially cyprinid lithophilic fish survival.     

Comparative pharmacokinetics and pharmacokinetic/pharmacodynamic analysis by nonlinear mixed‐effects modeling of cefquinome in nonpregnant,pregnant, and lactating goats after intravenous and intramuscular administration

Cefquinome is a fourth‐generation cephalosporin that is used empirically in goats. Different physiologic factors like pregnancy or lactation could determine the pharmacokinetic behavior of drugs in the organism. The objectives of this study are to (a) compare the pharmacokinetics of cefquinome after intravenous and intramuscular administration in adult nonpregnant (n = 6), pregnant (n = 6), and lactating goats (n = 6), at a dose of 2 mg/kg, with rich sampling by nonlinear mixed‐effects modeling, (b) conduct a pharmacokinetic/pharmacodynamic analysis to evaluate the efficacy of the recommended posology in goats with different physiological states, and (c) determine the optimal posology that achieve a PTA value ≥ 90%, taking into account a T > MIC ≥ 60% of a MIC value ≤ 0.25 µg/ml, in the different subpopulations of goats for both routes. Gestation significantly increased Ka and V1, while reduced F0, Cl, and Q. On the other hand, lactation significantly increased V1 and reduced Tk0. Cefquinome concentrations achieved in placental cotyledon, amniotic fluid, and fetal serum indicate a minimal penetration across the placental barrier. Moreover, milk penetration of cefquinome was minimal. The total body clearance of cefquinome for goats was 0.29 L kg^?1 hr^?1, that is apparently higher than the reported for cows (0.13 L kg^?1 hr^?1) and pigs (0.16 L kg^?1 hr^?1). So, the optimal dose regimen for cefquinome after intravenous and intramuscular administration required higher dose and frequency of administration compared with recommendations for cows or pigs. Therefore, 2 mg kg^?1 8 hr^?1 and 5 mg kg^?1 12 hr^?1 could be used for IV and IM routes, respectively, for the treatment of respiratory infections caused by P. multocida and M. haemolytica, but only 5 mg kg^?1 12 hr^?1 by both routes should be recommended for Escherichia coli infections.     

鸡白痢沙门氏菌鸡胚感染模型建立方法的筛选

为筛选出理想的鸡白痢沙门氏菌宿主感染模型的建立方法,本研究通过选择不同接种方式配合不同菌液浓度接种不同胚龄鸡胚建立感染模型,将90枚SPF鸡胚随机分成9组,每组10枚,分别为A、B、C、D、E、F、G、H、I组,A组为空白对照组,其余各组为模型组,模型组分别以气室接种、蛋壳接触接种的方式对不同胚龄（11和14胚龄）SPF鸡胚接种不同浓度（1×10³、3×10³、9×10³、3×10⁵、9×10⁵ CFU/mL）的鸡白痢沙门氏菌C79-3菌株。每天观察情况直至出雏,待雏鸡孵出后按组分笼饲养,每隔12 h观察1次,连续观察7 d,观察各组雏鸡的临床症状、死亡情况,观察期结束对死亡和存活雏鸡进行剖检、组织病理学检查及鸡白痢沙门氏菌的分离鉴定。结果显示,各模型组均有雏鸡出现明显的鸡白痢病症状并死亡,相较于其他模型组,以11胚龄蛋壳接触感染方式接种9×10⁵ CFU/mL的C79-3菌液的F组和14胚龄气室感染方式接种3×10³ CFU/mL C79-3菌液0.1 mL的H组,鸡胚出壳率较高,可分别达到80%和90%,出壳雏鸡呈现明显鸡白痢病特征,剖检可见肝脏出血、盲肠膨大、卵黄囊吸收不良;组织病理切片可观察到肝脏、盲肠、心脏各有不同程度的损伤,发病率分别100%和88.8%,并且鸡白痢沙门氏菌阳性检出率分别达70%和90%。本研究结果表明,以11胚龄蛋壳接触感染方式接种0.1 mL 9×10⁵ CFU/mL的C79-3菌液和14胚龄以气室感染方式接种0.1 mL 3×10³ CFU/mL的C79-3菌液的两种方法均可用于建立稳定的鸡白痢沙门氏菌宿主感染模型。