Biochar has little effect on soil dissolved organic carbon pool 5 years after biochar application under field condition

Biochar application can improve soil properties, such as increasing soil organic carbon content, soil pH and water content. These properties are important to soil dissolved organic carbon (DOC); however, the effects of biochar on DOC concentration and composition have received little research attention, especially several years after biochar application under field conditions. This study was conducted in a long‐term experimental field where the biochar was only applied once in 2009. The purpose of the study was to investigate the effect of different biochar application rates (0, 30, 60 and 90 t ha^?1) on the dynamics of soil water content, DOC concentration and DOC compositions (reducing sugar, soluble phenol and aromatics) over nine samplings during a 12‐month period in 2014. Our results showed that soil water content and DOC concentration varied from 7.1% to 14.5% and 59 to 230 mg C kg^?1 soil during the 12 months, respectively. However, the biochar application rates did not significantly (p > 0.05) affect soil water content, DOC concentration and DOC composition at the same sampling period. The DOC concentration across the biochar treatments was positively correlated to soil water content. Moreover, the DOC composition (reducing sugar, soluble phenol or aromatics) and their concentrations were positively correlated to the total DOC concentration. In addition, biochar did not affect soil bulk density, pH, saturated hydraulic conductivity and crop yields. The results indicated that some benefits of biochar to soil may not persist 5 years after the application of biochar under a field condition.     

Optimisation of fertiliser rates in crop production against energy use indicators

Optimising mineral nitrogen (N) use in crop production is inevitable target as mineral fertilisers reflect one of the highest inputs both in terms of economy and energy. The aim of the study was to compare the relationship between the rate of N fertiliser application and different measures of energy parameters exemplary data for spring-wheat in boreal climate condition in Estonia in 2006–2010. The effect of mineral N with rates 0, 40, 80, 120 and 160 kg N ha⁻¹ was studied on the background of composted cow manure and without organic fertilisers. Univalent parameters, energy gain (EG) (energy output − energy input) and energy ratio (ER) (energy output/energy input) were calculated. To aggregate parameters with different units (ER and EG) we proposed two standardisation approaches for combined indices. ER maximisation gave both organic fertilisation background optimum N norms significantly lower than EG (p < 0.05) optimisation. Both the new combined indices gave optimum N norms in between the rate of ER an EG. Composted cow manure background did not affect mineral N optimisation significantly. We suggest optimisation of mineral N according to bi-dimensional parameters as they capture important features of production efficiency and are more objective using as advisory tool for sustainable production systems.     

3,5-二硝基水杨酸法与酶法测定甜玉米还原糖和蔗糖含量的比较

针对目前测定甜玉米还原糖和蔗糖含量的3,5-二硝基水杨酸法和酶法进行比较研究,分析两者在育种中的应用。结果显示:酶法的测量准确度比3,5-二硝基水杨酸法高,且其稳定性和重现性都优于3,5-二硝基水杨酸法。通过两种方法对10个甜玉米杂交种种子的还原糖和蔗糖含量的测定,证实了两种方法在甜玉米还原糖和蔗糖含量的检测上是一致的。从育种实践考虑,酶法适于样品数较小的检测,3,5-二硝基水杨酸法更适合于大批量样品的检测。     

高含固率木质纤维素厌氧发酵物总DNA的4种提取方法比较

不同的样本特性和提取方法对获得微生物总DNA的质量有重要影响。文章基于高含固率木质纤维素厌氧发酵物腐殖酸、酚类物质含量高、质地均一性差、微生物浓度低的特点,研究了4种方法提取不同高含固率粪秸厌氧发酵物中微生物总DNA的效果。结果表明,常规的十二烷基磺酸钠法(sodium dodecyl sulfate,SDS)、十二烷基磺酸钠和溴化十六烷基三甲铵结合法(sodium dodecyl sulfate and cetyltrimethyl ammonium bromide,SDS-CTAB)和商业的粪便试剂盒法提取的DNA质量均较差,SDS法和试剂盒法未能获得聚合酶链式反应(polymerase chain reaction,PCR)扩增目的条带,SDS-CTAB法得到的条带较模糊;改进SDS-CTAB法获得的DNA杂质少、纯度高,具有较好的稳定性,A260/A280和A260/A230值分别为1.74~1.86和1.65~1.86,每克样品的DNA浓度在50 ng·μL^-1以上,电泳条带单一齐整、清晰明亮,PCR扩增的目的条带清晰度高,适宜后续分子生物学技术的分析。林格氏液洗脱、聚乙烯吡咯烷酮-40(Polyvinyl Pyrrolidone-40,PVP-40)洗涤液除杂以及裂解液和多种酶联合破壁是改进SDS-CTAB法获得该类专一性样本高质量微生物总DNA的关键步骤。     

Does sand content in spawning substrate result in early larval emergence? Evidence from a lithophilic cyprinid fish

The spawning success of lithophilic salmonids is strongly influenced by the fine sediment content (“fines”) of spawning substrates, yet knowledge on the impacts of fines on the spawning of non‐salmonid lithophiles remains limited, despite their ecological and socio‐economic importance in European rivers. Consequently, the aim here was to use an ex‐situ experiment to investigate the impact of sand content on egg survival and timing of larval emergence of the surface‐spawning cyprinid European barbel Barbus barbus. Thirty incubator boxes within a recirculating system were filled with one of five experimental sediment mixtures (0%–40% sand by mass) that each contained 300 fertilised eggs at a depth of 50 mm. Emerged, free‐swimming larvae were captured and counted daily to assess grain‐size effects on larval survival and emergence. Specifically, total proportion of emerged larvae, cumulative daily proportion of emerged larvae and time required to reach 50% emergence were measured during the study. Whilst the proportion of sand in the sediments did not have a significant impact on egg‐to‐emergence survival (mean survival per treatment 75%–79%), it significantly affected the timing of larval emergence to the water column; early emergence was detected in treatments with elevated sand content (on average, 50% emergence after 12–13 days versus 19 days in the control). Similar to findings from salmonid studies, these results suggest high sand content in spawning gravels can influence timing of larval emergence and potentially cyprinid lithophilic fish survival.     

Reduction in cadmium accumulation in japonica rice grains by CRISPR/Cas9-mediated editing of OsNRAMP5

Cadmium (Cd) intake is harmful to human health and Cd contamination in rice grains represents a severe threat to those consuming rice as a staple food. Knockout of Cd transporters is a promising strategy to reduce Cd accumulation in rice grains. OsNRAMP5 is the major transporter for Cd and manganese (Mn) uptake in rice. Nevertheless, it is uncertain whether knockout of OsNRAMP5 is applicable to produce low Cd rice without affecting plant growth and grain yield. In this study, we adopted CRISPR/Cas9-based gene editing technology to knock out OsNRAMP5 in two japonica varieties. We generated three independent transgene-free osnramp5 mutants and investigated the effect of osnramp5 mutations on Cd accumulation and plant growth. Hydroponic experiments showed that plant growth and chlorophyll content were significantly reduced in osnramp5 mutants at low Mn conditions, and this defective growth in the mutants could be fully rescued by supply of high levels of Mn. Cd and Mn accumulation in both roots and shoots was markedly reduced in the mutants compared to that in wild-type plants. In paddy field experiments, although Cd in flag leaves and grains was greatly reduced in osnramp5 mutants, some agronomic traits including plant height, seed setting rate, and grain number per panicle were affected in the mutants, which ultimately caused a mild reduction in grain yield. The reduced plant growth in the mutants can be attributed to a marked decrease in Mn accumulation. Our results reveal that the manipulation of OsNRAMP5 should be treated with caution: When assessing the applicability of osnramp5 mutants, soil pH and soil water content in paddy fields need to be taken into consideration, since they might affect the levels of available Mn in the soil and consequently determine the effect of the mutation on grain yield.     

Mass balanced based LCA of a common carp-lettuce aquaponics system

An aquaponics system (AS) is an integrated system that combines a recirculating aquaculture system and a hydroponics system (HS). It is designed to recover nutrients released from fish and transfer them to plants to provide a system more environmentally-friendly than the two systems working separately. As a result, several AS are under development, but little information is available about their overall performances. The aim of this study was to assess nutrient-use efficiency and environmental impacts of an AS, specifically a common carp-lettuce AS located in a greenhouse. Nutrient budgets of nitrogen (N) and phosphorus (P) were calculated and Life Cycle Assessment (LCA) was performed for the AS and for a lettuce Individual Hydroponics System (IHS), similar to the HS of the AS, operating in the greenhouse at the same time. The experiment was performed over a 52-day cycle, which corresponds to the growing time required to harvest marketable lettuce. The nutrient budgets were well balanced, with 24.6% of the N unaccounted-for, most likely due to N2 gas emission, and 6.6% of the P unaccounted-for, most likely due to having underestimated the quantity of sediment. At the beginning of the experiment, N represented 55.9%, 37.1% and 0.1% of the total N input in the formulated feed, stocked fish and lettuce seedlings, respectively. At the end of the experiment, N represented 47.6% and 0.4% of the total N input in the harvested fish and lettuce, respectively. At the beginning of the experiment, P represented 56.94%, 40.20% and 0.03% of the total P input in the formulated feed, stocked fish and lettuce seedlings, respectively. At the end of the experiment, P represented 51.52% and 0.42% of the total P input in the harvested fish and lettuce, respectively. LCA clearly indicated two environmental impact hotspots: the origin of nutrients and energy use. One kg of lettuce growth in the AS clearly had lower environmental impacts than that in the IHS for climate change, acidification, eutrophication, land competition and cumulative energy demand; however, a decrease in water dependence was not observed. The indicator for net primary production use highlighted the dependence of the AS on natural resources, especially fish meal and fish oil. Compared to the use of chemical nutrients in the IHS, the use of nutrients from formulated feed in the AS decreased climate change impact but increased the use of natural resources.     

微波辐射法竹浆纤维素的中性TEMPO氧化及表征

采用微波辐射法和中性2,2,6,6-四甲基哌啶-1-氧化物(TEMPO)自由基氧化工艺来预处理竹浆纤维素,之后用超声波机械处理制备微纤化纤维素。实验结果表明,在60℃下,TEMPO用量为0.15 mmol/g(以绝干浆计,下同),Na Cl O2用量为10 mmol/g,Na Cl O用量为1 mmol/g,微波氧化2 h,其羧基含量最高到达0.729 mmol/g,氧化效果最佳,超声波处理后微纤化纤维素得率高达85.7%。FT-IR分析表明纤维素氧化后引入羧基官能团;XRD结果揭示纤维素氧化反应只发生在纤维素的无定型区或结晶区表面;纤维素氧化前后的聚合度(Dp)结果表明相对于碱性氧化,微波辐射和中性TEMPO氧化对纤维的降解程度低,从而有效地保持了纤维素原本的长度。     

云南传统水稻品种W axy基因多样性形成和维持机制初探

本研究针对W axy基因第四外显子和第五外显子的3个功能位点开发了新的AS-PCR标记，完善了W axy基因的分子标记体系，为更精确的鉴定和筛选目标W axy等位基因提供了工具。直链淀粉含量测定和AS-PCR分析结果显示，云南传统水稻品种具有极为丰富的W axy基因多样性和直链淀粉含量变异，308个传统品种中共检测到65种不同的W axy单倍型，直链淀粉含量变幅为0~48%。In1、E6、E10和E4op/hp这4个位点的碱基频率在四大稻区间存在显著差异，E2位点和In1位点的碱基频率在不同民族间存在显著差异，表明不同稻作区、不同民族对水稻直链淀粉含量和W axy基因有着多样化的选择。同时民族混居地区E2和In1位点的碱基频率不同于其相应的民族独居地区，说明不同民族混居也会产生对W axy基因不同的选择并增加W axy基因的多样性。多样化的选择和民族混居是云南传统水稻品种W axy基因多样性形成和维持的重要机制。在云南四大稻作区中，南部边缘水陆稻区的W axy单倍型最为丰富，共检测到50种单倍型，占总数的77%，这一区域应被设为云南传统稻种资源的保护优先区和核心区。     

Physicochemical characterization and in-vitro digestibility of extruded rice noodles with different amylose contents based on rheological approaches

The physicochemical properties and in-vitro digestibility of extruded rice noodles with different amylose contents were characterized from a rheological point of view. Thermo-mechanical measurements showed that the rice flour with higher amylose contents exhibited greater stability to dual-mixing and higher degrees of starch gelatinization and retrogradation. In addition, greater elastic properties were clearly observed in the high amylose rice samples. The use of high amylose rice flour produced noodles with a harder texture, consequently contributing to reduced cooking loss. Furthermore, the rheological changes of extruded rice noodles were monitored in real time during the in-vitro starch digestion. The rice noodle digesta with higher amylose contents exhibited greater viscosities throughout the simulated oral-gastric-intestinal digestion steps. The flow behaviors of the rice noodle digesta consisted of the Power-law region and infinite shear plateau that were satisfactorily characterized by the Sisko model (R² > 0.99).