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81.
From regionally predictable to locally complex population structure in a freshwater top predator: river systems are not always the unit of connectivity in Northern Pike Esox lucius
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Dorte Bekkevold Lene Jacobsen Jakob Hemmer‐Hansen Søren Berg Christian Skov 《Ecology of Freshwater Fish》2015,24(2):305-316
Contemporary genetic diversity is the product of both historical and contemporary forces, such as climatic and geological processes affecting range distribution and continuously moulded by evolutionary forces selection, gene flow and genetic drift. Predatory freshwater fishes, such as Northern Pike Esox lucius, commonly exhibit small population sizes, and several local populations are considered endangered. Pike inhabit diverse habitat types, including lakes, rivers and brackish marine waters, thus spanning from small isolated patches to large open marine systems. However, pike population structure from local to regional scales is relatively poorly described, in spite of its significance to developing conservation measures. We analysed microsatellite variation in a total of 1185 North European pike from 46 samples collected across both local and regional scales, as well as over time, to address two overarching questions: Is pike population structure associated with local and/or regional connectivity patterns, and which factors likely have the main influence on the contemporary distribution of genetic diversity? To answer this, we combined estimators of population diversity and structure to assess evidence of whether populations within (i) habitats, (ii) drainage systems and (iii) geographical regions are closer related than among these ranges, and whether patterns are temporally stable. Contrasting previous predictions that genetic drift obscures signals of postglacial colonisation history, we identified clear regional differences in population genetic signatures, suggesting a major effect of drainage divides on colonisation history and connectivity. However, several populations deviated from the general pattern, showing that local processes may be complex and need to be examined case‐by‐case. 相似文献
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Ignacy Misztal Ignacio Aguilar Daniela Lourenco Li Ma Juan Pedro Steibel Miguel Toro 《Journal of animal science》2021,99(6)
Genomic selection (GS) is now practiced successfully across many species. However, many questions remain, such as long-term effects, estimations of genomic parameters, robustness of genome-wide association study (GWAS) with small and large datasets, and stability of genomic predictions. This study summarizes presentations from the authors at the 2020 American Society of Animal Science (ASAS) symposium. The focus of many studies until now is on linkage disequilibrium between two loci. Ignoring higher-level equilibrium may lead to phantom dominance and epistasis. The Bulmer effect leads to a reduction of the additive variance; however, the selection for increased recombination rate can release anew genetic variance. With genomic information, estimates of genetic parameters may be biased by genomic preselection, but costs of estimation can increase drastically due to the dense form of the genomic information. To make the computation of estimates feasible, genotypes could be retained only for the most important animals, and methods of estimation should use algorithms that can recognize dense blocks in sparse matrices. GWASs using small genomic datasets frequently find many marker-trait associations, whereas studies using much bigger datasets find only a few. Most of the current tools use very simple models for GWAS, possibly causing artifacts. These models are adequate for large datasets where pseudo-phenotypes such as deregressed proofs indirectly account for important effects for traits of interest. Artifacts arising in GWAS with small datasets can be minimized by using data from all animals (whether genotyped or not), realistic models, and methods that account for population structure. Recent developments permit the computation of P-values from genomic best linear unbiased prediction (GBLUP), where models can be arbitrarily complex but restricted to genotyped animals only, and single-step GBLUP that also uses phenotypes from ungenotyped animals. Stability was an important part of nongenomic evaluations, where genetic predictions were stable in the absence of new data even with low prediction accuracies. Unfortunately, genomic evaluations for such animals change because all animals with genotypes are connected. A top-ranked animal can easily drop in the next evaluation, causing a crisis of confidence in genomic evaluations. While correlations between consecutive genomic evaluations are high, outliers can have differences as high as 1 SD. A solution to fluctuating genomic evaluations is to base selection decisions on groups of animals. Although many issues in GS have been solved, many new issues that require additional research continue to surface. 相似文献
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本试验旨在研究改造运输车对缓解驴运输应激的效果。选取28头健康德州公驴,随机分为2组,从北京密云县运输至聊城市东阿县东阿黑毛驴研究所,路程约500 km,历时18 h。试验使用9.6 m长单层货车为运输车,对试验组(T)运输车进行改造,即加装顶层和双侧篷布、底部加装草帘和中部加装隔栏,对照组(C)不作处理。运输前后测定驴血液生化和激素指标,统计体重变化和发病驴数量。结果表明,与运输前相比,普通车组驴在落地当天检测到血清皮质醇(COR)、白蛋白(ALB)水平均显著升高(P<0.05),总蛋白(TP)、谷草转氨酶(AST)、热休克蛋白-90(HSP90)和肌酸激酶(CK)指标极显著升高(P<0.01),钙(Ca)浓度显著降低(P<0.05)。改造车组驴血液指标TP、AST和CK的变化范围低于普通车组。两组驴落地后血糖(GLU)水平均比运输前升高,但差异均不显著(P<0.05)。与运输前相比,改造车组驴落地后的体重减少低于普通车组;改造车组驴在落地后第10天平均体重接近运输前,而普通车组驴的平均体重在落地后第20天才基本恢复至运输前水平,即使用改造运输车辆可以尽早恢复体重。普通车组驴发病率为21.4%,改造车组为7.1%;两组均无死亡。综合上述结果,改造运输车可有效降低驴的运输应激,有利于提高动物运输福利,减少经济损失;本试验结果可为动物运输应激提供参考。 相似文献
85.
采用巴赞堰流公式计算流量的水头可调薄壁堰式渠道流量智能测控系统通过渠道流量量测与控制试验,验证了其精准的测流功能和智能控制技术的可行性。为进一步提高该测控系统运行的效率和稳定性,减少运行能耗,对矩形薄壁堰堰流公式进行水力试验研究,通过分析堰上水头和流量关系,拟合出矩形薄壁堰流量计算公式。通过向该拟合公式引入修正系数λ=0.848,将测控系统测得的堰上水头数据值代入该拟合公式求得的流量值与电磁流量计测得流量值的差值的平均值为-0.004L/s,标准差为0.119,线性相关系数R2=0.989 1。该拟合公式相对于巴赞堰流公式形式简单、参数较少、运算简便,同时也满足节水灌溉对精准测流的要求,更适用于水头可调薄壁堰式渠道流量智能测控系统,对于在灌区推广和使用该测控系统具有重要的意义。 相似文献
86.
DB102为一田间发现的三倍体水稻,利用它做母本与二倍体水稻中作59杂交,得到一个早世代(F2)稳定群体,通过微卫星分析发现,该群体中有一些微卫星位点发生了杂合性丧失,且至少6条染色体上发生微卫星位点杂合性丧失(loss of heterzygoisity LOH)可能有DNA序列变化。而微卫星位点的杂合性丧失又可能与该杂交组合早世代稳定有关。 相似文献
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土质边坡稳定安全系数的计算值主要与采用的简化计算方法和土工参数有关。采用正交试验法计算分析了不同的计算方法、材料参数、水位及其相关荷载、地震作用等对边坡安全系数计算值的影响,进而对设计中的计算方法和材料参数提出了一些有益的建议,并提出了在工程运行管理中应尽量避免低水位或水位骤降情况的意见,为土石坝类工程的设计与运行管理提供了重要参考。 相似文献
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对步行轮式气垫车围裙-地面阻力特性进行了分析。建立了步行轮式气垫车围裙-地面阻力的精确数学模型,并进行了试验验证。探讨了几个主要因素对围裙-地面阻力的影响。 相似文献