Genetic diversity of Bangladeshi native chickens based on complete sequence of mitochondrial DNA D-loop region

ABSTRACT

1. The aim of this study was to explore genetic diversity and possible origin of Bangladeshi (BD) native chickens. The complete mtDNA D-loop region was sequenced in 60 chickens representing five populations; naked neck, full feathered, Aseel, Hilly and autosomal dwarf. The 61 reference sequences representing different domestic chicken clades in China, India, Laos, Indonesia, Myanmar, and other Eurasian regions were included. The mtDNA D-loop sequence polymorphism and maternal origin of five BD populations were analysed.

2. A total of 35 polymorphic sites, and 21 haplotypes were detected in 60 mtDNA D-loop sequences. The haplotype and nucleotide diversity of the five populations were 0.921 ± 0.018 and 0.0061 ± 0.0019, respectively. Both mtDNA network and phylogenetic analysis indicated four clades (four haplogroups) in BD populations (21 haplotypes) along with 61 reference haplotypes. Clade E contained the most individuals (20) and haplotypes (11) of BD chickens, followed by clade D (17, 6), clade C (12, 2) and clade F (11, 2), respectively.

3. The higher number of unique haplotypes found in Yunnan, China, suggested that the origin of BD chickens was in this region. The haplotypes from different haplogroups were introduced in Bangladeshi chickens from India, China and Myanmar. The phylogenetic tree showed a close relationship of BD chickens with the clusters from India, China, Myanmar and Laos, and indicated the dispersion of BD chickens from these sources. The phylogenetic information revealed high genetic diversity of BD chickens because of their origin from different lineages with high genetic variation and distance, which was determined from four cluster and neighbour-joining trees.

4. In conclusion, BD populations had high genetic diversity. The mtDNA network profiles and phylogenetic trees showed multiple maternal origins of BD chickens from India, China, Myanmar and Laos.     

PP1γ2对树鼩精子成熟和运动性的调控作用研究

为了阐明树鼩精子中是否存在丝氨酸/苏氨酸蛋白磷酸酶1γ2(PP1γ2)及其在附睾精子中的存在形式,进而探究PP1γ2对精子成熟和运动性的调控作用,本试验以树鼩为研究对象,采用Western blotting分析了不同条件下树鼩附睾头和附睾尾精子中PP1γ2的存在形式和磷酸化程度,探讨了双丁酰环腺苷酸(db-cAMP)、3-异丁基-1-甲基黄嘌呤(IBMX)或Ca²⁺对树鼩精子中PP1γ2磷酸化表达水平的影响,并进一步研究了磷酸酶抑制剂冈田酸(okadaic acid,OA)和花萼海绵诱癌素A(calyculin A,CA)对树鼩精子中PP1γ2磷酸化程度的影响及其对树鼩附睾头和附睾尾精子运动度的影响。结果显示,在树鼩附睾头和附睾尾精子中均存在PP1γ2,且在等量的附睾头和附睾尾精子蛋白中,PP1γ2在附睾尾精子的磷酸化程度远高于附睾头精子;db-cAMP、IBMX或Ca²⁺不改变PP1γ2的磷酸化水平;磷酸酶抑制剂OA和CA能明显提高附睾头和附睾尾中PP1γ2磷酸化的程度,且能显著提高精子(尤其是附睾头精子)的运动度(P<0.05),OA和CA的最佳作用浓度分别为1μmol/L和10 nmol/L,最佳作用时间分别为15、20 min。本研究结果表明,蛋白磷酸酶PP1γ2对树鼩精子成熟及运动性具有重要的调控作用,其主要通过磷酸化和去磷酸化的变化发挥作用。     

防治桑枝芽枯萎细菌病害药物室内药效测定初报

作者1995~1996年对征集到的20多种杀菌剂,对桑枝、芽枯萎细菌病病原细菌No:1、No:2号菌株,应用植物病原细菌室内药效测定常规方法——抑菌圈法进行筛选,最后得出硫酸链霉素、盐酸土霉素、代森铵、抗菌素402、新洁尔灭、波尔多液、甲醛共七种对供试菌株效力较强,其中硫酸链霉素、盐酸土霉素、代森铵、波尔多液、甲醛已在病区小区试验和大田防治效果良好.     

不同砧木对苹果树水分状况日变化的影响

不同砧木红星苹果树含水量的日变化呈Ｖ形曲线。以乔砧树最高,Ｍ７中间砧树次之,Ｍ９中间砧树较低。含水量的日变化与水势的日变化基本呈正相关。地上部含水量与砧木解剖构造有关,矮砧树地上部含水量较低是导致树体矮化的因素之一     

橡胶树死皮病黄色体差异表达蛋白的初步分析

橡胶树"死皮病"给橡胶种植业带来严重的危害.为了更好地了解和阐明死皮病发生、发展的分子机制,研究应用双向凝胶电泳技术(two-dimensional gel electrophshiya/oresis,2-DE)比较橡胶树死皮株与健康株胶乳黄色体蛋白质组表达的差异.采用TCA/丙酮沉淀法提取橡胶树死皮株与健康株黄色体蛋白质并采用固相pH梯度(immobjlized pH graalient,IPG)双向凝胶电泳分离两种材料蛋白质,凝胶经银染显色后,用PDQuest图像分析软件进行比较分析、识别差异表达的蛋白质.成功获得橡胶树死皮株与健康株胶乳黄色体的双向凝胶电泳图谱.鉴定出13个蛋白差异点,其中10个上调表达,3个下调表达.并应用质谱技术鉴定了其中部分表达差异的蛋白质点,对渗调蛋白进行功能分析,认为渗调蛋白在死皮株中表现下调的情形可能与死皮病的发生有一定的关系.     

SH系矮化中间砧对‘富士’苹果树体生长、产量和果实品质的影响

2009年春季定植不同类型SH系矮化中间砧(SH1、SH3、SH6、SH9和SH40)苹果苗(宫藤富士/SH系砧木/平邑甜茶),株行距为1.5 m×5.0 m,纺锤形整形修剪,常规管理。2016年调查树体生长、冠层光照分布和果实产量品质的差异,为苹果矮化砧木的筛选利用提供参考。研究结果表明,栽植第8年(2016年),各中间砧嫁接树体的砧穗干周比无显著差异;SH1和SH6中间砧嫁接的树体最矮,SH40最高且冠幅最大;树体干周直径由高到低依次为:SH40、SH3、SH9、SH6和SH1;各中间砧嫁接树体总枝量均超过140万条·hm~(-2);SH6嫁接树体短枝比例最高,树势中庸;SH3和SH9短枝比例最低。各中间砧嫁接树体冠层平均相对光照强度由高到低依次为SH3(72.88%)、SH6(70.85%)、SH9(65.51%)、SH1(62.23%)和SH40(61.82%),SH6嫁接树体相对光照强度小于30%和40%的区域最小,仅为2.08%和4.17%。比较各中间砧树体连续稳产4年的结果情况,SH6嫁接树体4年(2013—2016年)累计产量最高且稳产性最好,SH1产量较低,SH9稳产性较差。各中间砧嫁接树平均单果质量由高到低依次为SH40 SH6 SH9 SH3 SH1。不同中间砧嫁接树果实不同类型糖含量和比例存在显著差异;而总酸含量、不同类型酸的含量(除草酸外)和比例差异不显著;SH6嫁接树果实糖酸比显著高于SH1、SH3和SH9。综合树体的生长和结果能力,SH6为中间砧嫁接‘富士’表现较好。     

The feasibility of remotely sensed data to estimate urban tree dimensions and biomass

Accurately measuring the biophysical dimensions of urban trees, such as crown diameter, stem diameter, height, and biomass, is essential for quantifying their collective benefits as an urban forest. However, the cost of directly measuring thousands or millions of individual trees through field surveys can be prohibitive. Supplementing field surveys with remotely sensed data can reduce costs if measurements derived from remotely sensed data are accurate. This study identifies and measures the errors incurred in estimating key tree dimensions from two types of remotely sensed data: high-resolution aerial imagery and LiDAR (Light Detection and Ranging). Using Sacramento, CA, as the study site, we obtained field-measured dimensions of 20 predominant species of street trees, including 30–60 randomly selected trees of each species. For each of the 802 trees crown diameter was estimated from the aerial photo and compared with the field-measured crown diameter. Three curve-fitting equations were tested using field measurements to derive diameter at breast height (DBH) (r² = 0.883, RMSE = 10.32 cm) from the crown diameter. The accuracy of tree height extracted from the LiDAR-based surface model was compared with the field-measured height (RMSE = 1.64 m). We found that the DBH and tree height extracted from the remotely sensed data were lower than their respective field-measured values without adjustment. The magnitude of differences in these measures tended to be larger for smaller-stature trees than for larger stature species. Using DBH and tree height calculated from remotely sensed data, aboveground biomass (r² = 0.881, RMSE = 799.2 kg) was calculated for individual tree and compared with results from field-measured DBH and height. We present guidelines for identifying potential errors in each step of data processing. These findings inform the development of procedures for monitoring tree growth with remote sensing and for calculating single tree level carbon storage using DBH from crown diameter and tree height in the urban forest.     

毛白杨单株木树皮率的研究

为研制精 度较高、 更符合客 观实际 的 林分 材种 出 材率 表, 利用 毛白 杨 林分 标准 地 及造材木资 料, 对毛 白杨单株 木树皮 率的变化 规律进 行了研究 。结果表 明, 树皮 率与 胸径、 树高、年龄呈 显著负相 关, 与林 分密度 呈显著正 相 关, 树 皮 率与 胸径 和 年龄 的单 因 子模 型以 及 树皮率与胸 径、树高 、年龄、林 分密度 的多元线 性模 型, 均 具 有 较高 的 估测 精 度; 在同 一 造 材木上, 树 皮率随材 长段的不 同而变 化, 在相 对长度 ７０ ％ 树 高以 下 范围, 树皮 率 随材 长段 增 长而迅速降 低, 但在０ ～２０ ｍ 树高 范 围内 , 树 皮率 常出 现 反弹 , 因 此, 应分 材 长 段测 算 树皮 率,进而编 制材种与 出材量 表; 树干 各部位皮 厚 与所 在部 位 直径 具 有十 分密 切 的关 系, 其 相 关模型可用 于立木造 材中树 皮率的估 测。     

楠木人工林优树选择标准和方法

本文分别应用小样地法、平均木标准差对比法、综合评分法、优势木对比法对４株预选树（ｎｍ－２０、ｎｍ－１９、ｎｍ－１８、ｎｍ－０６）进行分析,制定选优标准,确定ｎｍ－２０为优树。分析结果表明：应用小样地法进行楠木人工林选优最客观、正确,工作量较少。若预选树生长量指标ｍｄ＞４０％、ｍｈ＞３０％、ｍｖ＞１４０％且形质指标符合,则可确定为优树。     

乙烯利与橡胶树排胶及死皮关系

系统介绍乙烯利刺激增产机理和乙烯利对橡胶树排胶负面效应。