Soil solarization as a substitute for methyl bromide fumigation in greenhouse tomato production in Cyprus

Preplant soil fumigation with methyl bromide (MB) is presently standard practice in greenhouse tomato production. Since this compound is scheduled to be phased out by 2005, the possibility of using solarization as an alternative soil disinfestation method was examined in four greenhouse tomato trials. Solarization was applied for 8 weeks in July-August, using transparent polyethylene sheets for soil mulching, and compared with MB fumigation applied in September, before planting, at 80 g/m². Solarization raised the maximum soil temperature by 9°C and reduced the population density ofFusarium spp. in soil by 91–98%. Similar reductions of soil inoculum (95–99%) were obtained with MB fumigation. Both methods provided effective control of Fusarium wilt, Verticillium wilt and corky root rot on tomato plants. MB fumigation was in addition highly effective against root-knot nematodes, whereas nematode control with solarization did not exceed 50%. Both treatments resulted in similar fruit yield increases, ranging within 90–140% compared with plants grown in untreated soil. During the second cropping season following soil treatment, solarization exhibited two times higher residual effectiveness against vascular wilt diseases compared with MB fumigation. The latter treatment, however, was superior to solarization in its residual effectiveness against root-knot nematodes and to a lesser extent against corky root rot. Fruit yields from solarized and MB-fumigated soil during the second cropping season were higher than those obtained from untreated soil by approximately 35% and 60%, respectively. In Cyprus, solarization appears to be an effective alternative to MB fumigation in greenhouse tomato production, especially if integrated with other approaches enabling more effective nematode control.     

Suppression of wheat-seedling diseases caused by Fusarium culmorum and Microdochium nivale using bacterial seed treatment

Snow mould, caused by Microdochium nivale , and seedling blight caused by members of the Fusarium complex, are cereal diseases of great economic importance in many temperate zones. In a glasshouse bioassay designed to enhance disease, about 600 plant-associated bacterial isolates obtained by different methods were screened for suppressive effects in wheat against infection caused by Fusarium culmorum . Although most of the isolates tested had a neutral effect on test plants and disease development, a few were synergistic to the pathogen and about one-fifth showed > 80% disease suppression. During five consecutive growing seasons, 164 bacterial isolates were tested in field experiments against both F. culmorum and M. nivale as causal agents of seedling blight. Tests for effects on yield in experiments with spring and winter wheat, performed in different climatic regions of Sweden, showed that disease-suppressive effects were repeatable. The most efficient isolates, three fluorescent pseudomonads and a species of Pantoea , suppressed disease equal to that of the fungicide guazatine, both with respect to crop stand and yield. Seed treatment with Pantoea sp. (isolate MF 626) increased yield by an average of more than 500 kg ha⁻¹ in six field experiments.     

Parasitic weeds of the Orobanchaceae family and their natural hosts in Jordan

A field survey of the Orobanchaceae family members and their hosts in Jordan was carried out from 2003 to 2007. The intensity of parasite infection on different hosts and the severity of the infestation were evaluated. The results showed the presence of seven species of Orobanche and three species of Cistanche . The Orobanche species were found parasitizing 86 plant species belonging to 24 botanical families. Most of the species attacked by Orobanche were from the Compositae (20 species), Solanaceae (11 species), Leguminosae (nine species), Umbelliferae (seven species), Cruciferae (seven species), Cucurbitaceae (four species), Labiatae (four species), and Rosaceae (four species) families. Other families were represented by one-to-three species. Cistanche attacked 20 species of forage wild shrubs, fruit trees, and forest trees of seven families, mostly belonging to the Chenopodiaceae (seven species) and Leguminosae (three species) families. Previously unreported hosts for both genera include: Amygdalus communis , Olea europaea , and Quercus coccifera , which were parasitized by Orobanche palaestina ; A. communis , O. europaea , Prunus armeniaca , and Prunus persica , which were parasitzed by Orobanche cernua ; O. europaea and A. communis , which were parasitzed by Orobanche schultzii ; Haloxylon persicum , which was parasitzed by Cistanche lutea ; Punica granatum , Alhagi maurorum , Casuarina equisetifolia , Centaurea postii , and Prosopis farcta , which were parasitzed by Cistanche tubulosa ; and Achillea spp., Anabasis syriaca , H. persicum , Haloxylon salicornicum, Suaeda spp., and Zilla spinosa , which were parasitzed by Cistanche salsa . Certain Orobanche species were completely destructive to the cultivated crops. The results indicated the high potential of both parasitic genera to spread and to attack new hosts, while the threat they impose to agriculture in Jordan will probably result from poor management and deficiences in farmers' training.     

Variation among Colletotrichum gloeosporioides isolates from infected coffee berries at different locations in Vietnam

Isolates of Colletotrichum gloeosporioides associated with anthracnose disease on coffee berries in Vietnam were characterized by morphological and molecular methods. Random amplified polymorphic DNA (RAPD) and microsatellite-primered PCR (MP-PCR) analyses were employed to investigate the genetic variation among 38 and 51 isolates of C. gloeosporioides , respectively. According to both methods, the isolates mainly grouped in accordance with geographical origins. Higher genetic variation ( H  = 0·312 and 0·335) in the northern population of C. gloeosporioides than in the southern population ( H  = 0·261 and 0·186), according to the RAPD and MP-PCR markers, respectively, was indicative of a difference between the northern and southern populations. Moderate gene differentiation ( G st = 0·1) between populations from the north and the south was found. However, there was no differentiation between locations within the northern or southern populations, indicating significant gene flow. A four-gamete test indicated a high level of recombination, particularly in the south. The geographic differences may be explained by different histories of coffee cultivation in different parts of Vietnam. The symptoms caused by the Vietnamese isolates on both hypocotyls and green berries were less severe than symptoms caused by the reference CBD (coffee berry disease; Colletotrichum kahawae ) isolates originating from Africa.     

Development and application of a PCR-based 'molecular tool box' for the identification of Phytophthora species damaging forests and natural ecosystems

A PCR-based 'molecular tool box', based on a region of the ras-related protein gene Ypt 1, was developed for the identification of 15 Phytophthora species that damage forests and trees: P. cactorum , P. cambivora , P. cinnamomi , P. citricola , P. europaea , P. inundata , P. lateralis , P. megasperma , P. nemorosa , P. kernoviae , P. pseudosyringae , P. psychrophila , P. quercina , P. ramorum and P. ilicis . Most primers proved highly specific in blast analyses and in tests with DNA from 72 isolates of 35 species of Phytophthora and nine species representative of Pythium . Exceptions were primers designed for P. cactorum and P. ilicis , which cross-reacted with P. idaei and P. nemorosa , respectively. Amplification with Phytophthora -genus-specific primers before amplification with the various species-specific primers (nested PCR) increased the sensitivity of detection over amplification with species-specific primers only: detection limits ranged between 100 and 10 pg target DNA µ L⁻¹ in the latter, compared with 100 fg µ L⁻¹ in nested PCR. Using existing methods for rapid extraction and purification of DNA, single-round amplification was appropriate for detection of target Phytophthora species in leaves, but nested PCR was required for soil and water samples. The quarantine pathogens P. ramorum and P. kernoviae were detected in a number of naturally infected leaves collected in England and Wales, whereas P. citricola was commonest in water and soil samples from natural Scottish ecosystems.     

Control of seed-borne pathogens on legumes by microbial and other alternative seed treatments

Greenhouse trials were carried out in order to test the efficacy of different seed treatments as alternatives to chemicals against Colletotrichum lindemuthianum cause of anthracnose on bean and Ascochyta spp. cause of Ascochyta blights on pea, respectively. Resistance inducers, commercially formulated microorganisms, non-formulated selected strains of different microorganisms (fungi, bacteria and yeasts) and plant extracts were applied as dry or liquid seed treatments on naturally infested seeds. Seedling emergence and disease incidence and/or severity were recorded. Almost all seed treatments turned out to be ineffective in controlling the Ascochyta infections, which is in line with the literature stating that these pathogens are difficult to control. The only alternative treatments that gave some control of Ascochyta spp. were thyme oil and a strain of Clonostachys rosea. The resistance inducers tested successfully controlled infections of bean by C. lindemuthianum. Among the formulated microorganisms, Bacillus subtilis-based formulations provided the best protection from anthracnose. Some strains of Pseudomonas putida, a disease-suppressive, saprophytic strain of Fusarium oxysporum and the mustard powder-based product Tillecur also proved to be effective against bean anthracnose. However, among the resistance inducers as well as among the other groups, certain agents caused a significant reduction of plant emergence. Different alternative seed treatments can therefore be used for the control of C. lindemuthianum on bean, while on pea only thyme oil and a strain of Clonostachys rosea showed some effectiveness against Ascochyta spp.     

Physiological disorders,bitter rot and other fungal decay of ‘Aroma’ apple fruit stored in controlled atmosphere

Effects of controlled atmosphere (CA) conditions on physiological disorders and fungal fruit decay on apple ‘Aroma’ were investigated. Fruit from three growing seasons were stored at 1% or 2% O₂ (both at 2% CO₂) at either 1°C or 3°C in small research units; controls were kept in the same ventilated rooms at the two temperatures (ambient air). The fruit were removed from storage after four or six months and assessed for fruit decay immediately afterwards and after two weeks at 20°C. Fruit quality parameters were recorded at the end of storage. On a three-year average, fruit stored in CA was less ripe at the end of storage. After both four and six months storage, CA reduced total decay (physiological disorders and fungal decay) by on average 70% and 45%, respectively, compared to storage in ambient air. Senescent breakdown was lower after CA storage for four months, but not after six months and not after simulated shelf life. Soft scald was lower when stored in CA both after cold storage at 1°C and simulated shelf life. After storage at 3°C there was lower incidence of soft scald when stored in CA after four months, but not after six months. For fungal fruit decay in general, there was no effect of low oxygen, however, 2% O₂ gave slightly less bitter rot (Colletotrichum acutatum) than 1% O₂ and significantly less than ambient air after simulated shelf life. Averaged over all oxygen levels, 1°C gave significantly less bitter rot than 3°C. It may be concluded that use of CA for storage of ‘Aroma’ is a good way of reducing development of physiological disorders. However, development of bitter rot seemed to be more influenced by temperature and storage time than by low O₂.     

Preferred nesting sites of bumblebee queens (Hymenoptera: Apidae) in agroecosystems in the UK

Bumblebees (Bombus spp.) have undergone a documented Europe-wide decline in recent years, mostly attributable to destruction of forage and nest sites caused by agricultural intensification. This study was set up to quantify species-specific nest-site preferences of observed UK species for various types of field and forest boundary habitat. In total, 1287 observations were made of seven common bumblebee species; nest-searching behaviour was taken as being indicative of nest site preference. There was interspecific variation in preferred habitat, with some species found to be much more specific in their choice of nest site than others. A strong association was found between those species that are known to prefer subterraneous nesting and those habitats that contained banks (Bombus terrestris, B. lapidarius and B. lucorum); other species were strongly associated with tussock-type vegetation (B. pascuorum, B. hortorum and B. ruderarius). In order to safeguard the continued existence of bumblebee species it is clear that a variety of field and forest boundary types need to be conserved; this has positive implications for the conservation of other species of flora and fauna associated with agroecosystems.