Upscaling as ecological information transfer: a simple framework with application to Arctic ecosystem carbon exchange

Transferring ecological information across scale often involves spatial aggregation, which alters information content and may bias estimates if the scaling process is nonlinear. Here, a potential solution, the preservation of the information content of fine-scale measurements, is highlighted using modeled net ecosystem exchange (NEE) of an Arctic tundra landscape as an example. The variance of aggregated normalized difference vegetation index (NDVI), measured from an airborne platform, decreased linearly with log(scale), resulting in a linear relationship between log(scale) and the scale-wise modeled NEE estimate. Preserving three units of information, the mean, variance and skewness of fine-scale NDVI observations, resulted in upscaled NEE estimates that deviated less than 4% from the fine-scale estimate. Preserving only the mean and variance resulted in nearly 23% NEE bias, and preserving only the mean resulted in larger error and a change in sign from CO₂ sink to source. Compressing NDVI maps by 70–75% using wavelet thresholding with the Haar and Coiflet basis functions resulted in 13% NEE bias across the study domain. Applying unique scale-dependent transfer functions between NDVI and leaf area index (LAI) decreased, but did not remove, bias in modeled flux in a smaller expanse using handheld NDVI observations. Quantifying the parameters of statistical distributions to preserve ecological information reduces bias when upscaling and makes possible spatial data assimilation to further reduce errors in estimates of ecological processes across scale.     

光唇鱼网箱养殖试验

网箱单养、混养光唇鱼的试验结果表明,在25m2网箱中,单养光唇鱼以200～220尾/m2的放养密度比较合适,单位面积产量可达12.7～12.9 kg/m2;瓯江彩鲤网箱中混养光唇鱼,在瓯江彩鲤保持180尾/m2的放养密度不变的情况下,混养20尾/m2的光唇鱼,其效果比单养瓯江彩鲤更好,单位面积产量可达103.2kg/m2.     

Livestock water productivity in mixed crop–livestock farming systems of the Blue Nile basin: Assessing variability and prospects for improvement

Water scarcity is a major factor limiting food production. Improving Livestock Water Productivity (LWP) is one of the approaches to address those problems. LWP is defined as the ratio of livestock’s beneficial outputs and services to water depleted in their production. Increasing LWP can help achieve more production per unit of water depleted. In this study we assess the spatial variability of LWP in three farming systems (rice-based, millet-based and barley-based) of the Gumera watershed in the highlands of the Blue Nile basin, Ethiopia. We collected data on land use, livestock management and climatic variables using focused group discussions, field observation and secondary data. We estimated the water depleted by evapotranspiration (ET) and beneficial animal products and services and then calculated LWP. Our results suggest that LWP is comparable with crop water productivity at watershed scales. Variability of LWP across farming systems of the Gumera watershed was apparent and this can be explained by farmers’ livelihood strategies and prevailing biophysical conditions. In view of the results there are opportunities to improve LWP: improved feed sourcing, enhancing livestock productivity and multiple livestock use strategies can help make animal production more water productive. Attempts to improve agricultural water productivity, at system scale, must recognize differences among systems and optimize resources use by system components.     

Integrated effect of transplanting date, cultivar and irrigation on yield, water saving and water productivity of rice (Oryza sativa L.) in Indian Punjab: Field and simulation study

Individual effect of different field scale management interventions for water saving in rice viz. changing date of transplanting, cultivar and irrigation schedule on yield, water saving and water productivity is well documented in the literature. However, little is known about their integrated effect. To study that, field experimentation and modeling approach was used. Field experiments were conducted for 2 years (2006 and 2007) at Punjab Agricultural University Farm, Ludhiana on a deep alluvial loamy sand Typic Ustipsamment soils developed under hyper-thermic regime. Treatments included three dates of transplanting (25 May, 10 June and 25 June), two cultivars (PR 118 inbred and RH 257 hybrid) and two irrigation schedules (2-days drainage period and at soil water suction of 16 kPa). The model used was CropSyst, which has already been calibrated for growth (periodic biomass and LAI) of rice and soil water content in two independent experiments. The main findings of the field and simulation studies conducted are compared to any individual, integrated management of transplanting date, cultivar and irrigation, sustained yield (6.3-7.5 t ha⁻¹) and saved substantial amount of water in rice. For example, with two management interventions, i.e. shifting of transplanting date to lower evaporative demand (from 5 May to 25 June) concomitant with growing of short duration hybrid variety (90 days from transplanting to harvest), the total real water saving (wet saving) through reduction in evapotranspiration (ET) was 140 mm, which was almost double than managing the single, i.e. 66 mm by shifting transplanting or 71 mm by growing short duration hybrid variety. Shifting the transplanting date saved water through reduction in soil water evaporation component while growing of short duration variety through reduction in both evaporation and transpiration components of water balance. Managing irrigation water schedule based on soil water suction of 16 kPa at 15-20 cm soil depth, compared to 2-day drainage, did not save water in real (wet saving), however, it resulted into apparent water saving (dry saving). The real crop water productivity (marketable yield/ET) was more by 17% in 25th June transplanted rice than 25th May, 23% in short duration variety than long and 2% in irrigation treatment of 16 kPa soil water suction than 2-days drainage. The corresponding values for the apparent crop water productivity (marketable yield/irrigation water applied) were 16, 20 and 50%, respectively. Pooled experimental data of 2 years showed that with managing irrigation scheduling based on soil water suction of 16 kPa at 15-20 cm soil depth, though 700 mm irrigation water was saved but the associated yield was reduced by 277 kg ha⁻¹.     

Effects of water stress at different development stages on yield and water productivity of winter and summer safflower (Carthamus tinctorius L.)

A field study was carried out to determine the effects of water stress imposed at different development stages on grain yield, seasonal evapotranspiration, crop-water relationships, yield response to water and water use efficiency of safflower (Carthamus tinctorius L.) for winter and summer sowing. The field trials were conducted on a loam Entisol soil in Thrace Region in Turkey, using Dincer, the most popular safflower variety in the research area. A randomised complete block design with three replications was used. Three known growth stages of the plant were considered and a total of 8 (including rainfed) irrigation treatments were applied. The effect of irrigation or water stress at any stage of development on grain yield per hectare and 1000 kernel weight, was evaluated. Results of this study showed that safflower was significantly affected by water shortage in the soil profile due to omitted irrigation during the sensitive vegetative stage. The highest yield was observed in the fully irrigated control and was higher for winter sowing than for summer sowing. Evapotranspiration calculated for non-stressed production was 728 and 673 mm for winter and summer sowing, respectively. Safflower grain yield of the fully irrigated treatments was 4.05 and 3.74 t ha⁻¹ for winter and summer season, respectively. The seasonal yield response factor was 0.97 and 0.81 for winter and summer sowing, respectively. The highest total water use efficiency was obtained in the treatment irrigated only at vegetative stage while the lowest value was observed when the crop was irrigated only at yield stage. As conclusions: (i) winter sowing is suggested; (ii) if deficit irrigation is to apply at only one or two stages, Y stage or Y and F stages should be omitted, respectively.     

Optimizing supplemental irrigation: Tradeoffs between profitability and sustainability

Water production functions are used to model yield response to various levels of supplemental irrigation (SI), to assess water productivity coefficients, and to identify optimum irrigation under various input-output price scenarios. The SI production function is taken as the difference between the total water production function (irrigation + rain) and that of rainwater. Theoretical analysis of the unconstrained objective function shows that the seasonal depth of SI to maximize profit occurs when the marginal product of water equals the ratio of unit water cost to unit product sale price. Applying this analysis to wheat in northern Syria, the production functions of SI under different rainfall conditions are developed. Coupled with current and projected water costs and wheat sale prices, the functions are used to develop an easy-to-use chart for determining seasonal irrigation rates to maximize profit under a range of seasonal rainfall amounts.Results show that, for a given seasonal rainfall, there is a critical value for the ratio of irrigation cost to production price beyond which SI becomes less profitable than rainfed production. Higher product prices and lower irrigation costs encourage the use of more water. Policies supporting high wheat prices and low irrigation costs encourage maximizing yields but with low water productivity. The resulting farmer practice threatens the sustainability of water resources. Balancing profitability versus sustainability is a challenge for policy makers. Our analysis can help national and local water authorities and policy makers determine appropriate policies for water valuation and allocation; and assist extension services and farmers in planning irrigation infrastructure and farm water management.     

Irrigation scheduling strategies for cotton to cope with water scarcity in the Fergana Valley, Central Asia

The Central Asian countries face high water scarcity due to aridity and desertification but excess water is often applied to the main irrigated crops. This over-irrigation contributes to aggravate water scarcity problems. Improved water saving irrigation is therefore required, mainly through appropriate irrigation scheduling. To provide for it, after being previously calibrated and validated for cotton in the Fergana region, the irrigation scheduling simulation model ISAREG was explored to simulate improved irrigation scheduling alternatives. Results show that using the present irrigation scheduling a large part of the applied water, averaging 20%, percolates out of the root zone. Several irrigation strategies were analyzed, including full irrigation and various levels of deficit irrigation. The analysis focused a three-year period when experiments for calibration and validation of the model were carried out, and a longer period of 33 years that provided for an analysis considering the probabilities of the demand for irrigation water. The first concerned a wet period while the second includes a variety of climatic demand conditions that provided for analyzing alternative schedules for average, high and very high climatic demand. Results have shown the importance of the groundwater contribution, mainly when deficit irrigation is applied. Analyzing several deficit irrigation strategies through the respective potential water saving, relative yield losses, water productivity and economic water productivity, it could be concluded that relative mild deficits may be adopted. Contrarily, the adoption of high water deficit that produce high water savings would lead to yield losses that may be economically not acceptable.     

Energy and resource consumption of land-based Atlantic salmon smolt hatcheries in the Pacific Northwest (USA)

This paper evaluates the resource and energy requirements of six different types of land-based, hatchery production systems located in the U.S. Pacific Northwest: flow-through with a gravity water supply, flow-through with a pumped water supply, flow-through with pure oxygen, partial reuse system, partial reuse with heating, and a reuse system for the production of Atlantic salmon (Salmo salar) smolts. Key parameters used in the evaluation include direct energy, indirect energy, transportation energy, greenhouse gas emissions, and pollutant discharges.Power (electricity and natural gas) and feed energy accounted for the majority of the required energy for all the rearing option evaluated. The sum of the fixed capital and chemicals components accounted for less than 2–12% of the total energy budget for any rearing option. The energy efficiency (energy output/energy input) of the six options ranges from 0.97% for flow-through with pumped supply to 3.49% for the flow-through with gravity supply. The rearing options with the three highest energy efficiencies were flow-through with gravity supply (3.49%), partial reuse (2.75%), and reuse (2.64%).On a kg of smolt produced basis, the six rearing options showed a wide range in performance. The reuse system had the lowest water (2 m³ kg^− 1) and land (0.13 m² kg^− 1) requirements and the third lowest total energy requirement (288 MJ kg^− 1). The partial reuse system had the second lowest total power requirement (276 MJ kg^− 1), a low land requirement (0.21 m² kg^− 1), and moderate water requirements (33 m³ kg^− 1). The partial reuse with temperature control had the second highest total power requirement (657 MJ kg^− 1) and land and water requirements similar to the partial reuse system without temperature control. The flow-through system with pumped water supply had the highest water (289 m³ kg^− 1), land (2.19 m² kg^− 1), and energy requirements (786 MJ kg^− 1) of any of the rearing options. By comparison, the flow-through system with gravity water supply had the lowest energy requirement (218 MJ kg^− 1), a moderate land requirement (0.78 m² kg^− 1), and a high water requirement (214 m³ kg^− 1). The ranking of the six rearing options based capital and operating costs are likely to be quite different from those based on energy, water, and greenhouse gas emissions.     

cDNA cloning and complete primary structures of myosin heavy chains from brushtooth lizardfish Saurida undosquamis and wanieso lizardfish S. wanieso fast skeletal muscles

ABSTRACT:   The complete cDNA sequences encoding predominant types of myosin heavy chain (MYH) in the fast skeletal muscle were determined for brushtooth lizardfish Saurida undosquamis and wanieso lizardfish S. wanieso , which are used as materials for preparing high-quality surimi-based products. The cDNA consisted of 5973 and 5987 bp, respectively, and both encompassed an open reading frame encoding a polypeptide of 1936 amino acid residues. Brushtooth and wanieso lizardfish MYH showed the amino acid sequence identity of 92–93% to white croaker MYH, which was higher than that of 90% to walleye pollack MYH. The putative binding sites for ATP, actin, and regulatory and essential light chains in the subfragment-1 region of brushtooth lizardfish MYH exhibited a high identity with white croaker counterparts as well as the sequences of subfragment-2 and light meromyosin. In contrast, phylogenetic tree, constructed by the neighbor-joining method based on mitochondrial 16S rRNA gene, revealed that the two lizardfish species formed a cluster with walleye pollack, which was paraphyletic with white croaker. Therefore, a good reputation for lizardfish and white croaker to have a high thermal-gel forming ability seemed to be reflected by MYH rather than biological similarity as revealed by the mitochondrial 16S rRNA gene.     

鲫肠道上皮细胞原代培养方法的研究

探讨了健康鲫(Carassius auratus)幼鱼肠道上皮细胞的原代培养方法。结果显示,用含有抗生素、胶原蛋白酶Ⅰ、EDTA和胶原蛋白酶Ⅳ组成的D-Hanks液消化无菌分离的鲫肠道可以获得大量细胞团及绒毛隐窝;用含有抗生素、胎牛血清(FBS)、表皮生长因子(EGF)、胰岛素的DMEM培养液进行培养,并根据肠道上皮细胞与成纤维细胞贴壁时间的差异进一步纯化,连续培养12d后可以得到纯化的肠道上皮细胞。