Soil quality and fertility in sustainable agriculture,with a contribution to the biological classification of agricultural soils

Soils and crops are particularly vulnerable to climate change and environmental stresses. In many agrosystems, soil biodiversity and ecosystem services provided by soils are under threat from a range of natural and human drivers. Agricultural soils are often subject to agronomic practices that disrupt soil trophic networks and make soils less productive in the long term. In this scenario, sustainable soil use aimed at improving plant/root status, growth and development plays a crucial role for enhancing the biological capacity of agricultural soils. This commentary paper is divided into the following four main sections: (i) the contentious nature of soil organic matter; (ii) soil biological quality/fertility; (iii) soil classification; and, (iv) which agricultural practices can be defined as sustainable? The published literature was analyzed within a holistic framework, with agrosystems considered as living systems where soil, vegetation, fauna and microorganisms co-evolve and are reciprocally influenced. Ultimately, this article will suggest a better stewardship of agricultural soils as a natural capital.     

Long-term manuring and fertilization influence soil inorganic phosphorus transformation vis-a-vis rice yield in a rice–wheat cropping system

A study on the rice–wheat cropping system was conducted at Bidhan Chandra Krishi Viswavidyalaya, West Bengal, India, to assess the effects of long-term manuring and fertilization on transformation of the inorganic phosphorus (P) fraction in soil after 22 years of the crop cycle. Soil samples were collected after Kharif from seven treated plots having different types of organic amendments like farm yard manure, paddy straw and green manuring with 50% substitution of nitrogen levels in rice crop only. The result showed that the yield trend of rice was maintained due to the buildup of P from various organic inputs. Although cultivation for 22 years without adding any fertilizer caused a significant decrease in almost all the forms of P viz. avail-P, saloid P, iron phosphorus fraction (Fe–P), aluminum phosphorus fraction (Al–P), calcium phosphorus fraction (Ca–P) and total P in control. Partial substitution of inorganic fertilizer N (50%) with organics, however, caused a significant increase in almost all the P fractions in soil over the control. The relative abundance of all the fractions of inorganic P irrespective of treatments was as follows: Fe–P > reductant soluble P fraction > occluded P > Al–P > Ca–P > saloid P. Saloid and Fe–P were the dominating fractions responsible for 92% variation of available P and total P levels, respectively.     

Influence of summer legume residue recycling and varietal diversification on productivity,energetics, and nutrient dynamics in basmati rice–wheat cropping system of western Indo-Gangetic Plains

A field experiment was conducted on summer mungbean residue recycling (SMBRR) and basmati rice–wheat cropping system (BRWCS) at New Delhi, India. The SMBRR enhanced the system productivity and net returns by ～19.1% and 22.1% compared to summer fallow (SF) with highest magnitude under genotypic sequence of P 2511/HD 2967. Two genotypes each in basmati rice (PB 1 and P 2511) and wheat (HD 2967 and HD 2733) responded well to SMBRR with respect to grain yield efficiency index (GYEI) ≥ 1.0. SMBRR also registered ～13.5% higher microbial biomass carbon (MBC) than SF. Soil organic carbon (SOC) storage also increased by ～6.8% in 0–30 cm soil layer. The rice–wheat–summer mungbean system produced significantly highest energy efficiency compared to the rice–wheat–summer fallow system with highest values under genotypic sequence of P 2511/HD 2967 as a result of better yield expression. Overall, SMBRR with suitable genotypic sequence improved the system productivity, profitability, and nutrient dynamics in BRWCS, which are vital for long-term sustainability of this system.     

Improving soil organic carbon pools through inclusion of summer mungbean in cereal-cereal cropping systems in Indo-Gangetic plain

Long-term effect of mungbean inclusion in lowland rice-wheat and upland maize-wheat systems on soil carbon (C) pools, particulate organic C (POC), and C-stabilization was envisaged in organic, inorganic and without nutrient management practices. In both lowland and upland systems, mungbean inclusion increased very-labile C (Cfrac₁) and labile C (Cfrac₂) in surface soil (0–0.2 m). Mungbean inclusion in cereal-cereal cropping systems improved POC, being higher in lowland (107.4%). Lowland rice-based system had higher passive C-pool (11.1 Mg C ha^?1) over upland maize-based system (6.6 Mg C ha^?1) indicating that rice ecology facilitates the stabilization of passive C-pool, which has longer persistence in soil. Organic nutrient management (farmyard manure + full crop residue + biofertilizers) increased Cfrac₁ and carbon management index (CMI) over inorganic treatment. In surface soil, higher CMI values were evident in mungbean included cropping systems in both lowland and upland conditions. Mungbean inclusion increased grain yield of cereal crops, and yield improvement followed the order of maize (23.7–31.3%) > rice (16.9–27.0%) > wheat (lowland 7.0–10.7%; upland 5.4–16.6%). Thus, the inclusion of summer mungbean in cereal-cereal cropping systems could be a long-term strategy to enrich soil organic C and to ensure sustainability of cereal-cereal cropping systems.     

Evaluation of pan coefficient equations for estimating reference crop evapotranspiration in the arid region

Reference evapotranspiration (ET₀) can be estimated on basis of pan evaporation data (E_pan), whose measurements have the advantage of low cost, simplicity of the measuring equipment, simple data interpretation and application as well as suitability for locations with limited availability of meteorological data. E_pan values were converted to ET₀ using the pan evaporation coefficient (K_pan). In this study, seven common K_pan equations were evaluated for prediction of ET₀ in the growing season (April to October) in arid region of Iran. The Cuenca approach was best suited compared to the standard FAO Penman–Monteith method (FAO-56 PM).     

Grain legume effects on soil nitrogen mineralization potential and wheat productivity in a Mediterranean environment

The objective of this work was to provide evidence on the effects of faba bean (Vicia faba L.) and chickpea (Cicer arietinum L.) on the dynamics of soil N availability and yield parameters of wheat (Triticum turgidum L. var. durum) in a legume–wheat rotation in comparison with the effects of the more extensively studied common vetch (Vicia sativa L.). Soil samples were taken from field plots just before wheat sowing and incubated in the laboratory to assess N mineralization potential, soil respiration and N immobilization after incorporation of legume residues. Soil after vetch cultivation showed the highest residual N and mineralization potential (120 mg N kg^?1 soil), the greatest CO₂ release and the smallest N immobilization. Smaller mineral N release (80 mg N kg^?1 soil) was shown by soil after faba bean cultivation, which, however, would be capable to support an average wheat production without fertilization. Soil after chickpea and wheat cultivation manifested no differences in residual N and mineralization or immobilization potential. Laboratory results were well correlated with grain yield and N uptake during the second season of rotation in the field. All legumes resulted in significant yield surpluses and provided N credit to the following unfertilized wheat.     

毛竹PhcircRNA1的鉴定和调控通路分析

环状RNA(circRNAs)是一类经过反向剪切后,3′末端和5′末端共价结合形成的闭合环状单链非编码RNA,在环境胁迫下对植物生长发育有着重要调控作用。为探索circRNA在毛竹响应胁迫过程中的调控作用,本研究构建了circRNA-miRNA-mRNA调控通路。在分析毛竹的全转录组测序数据后,选择并鉴定了1个在紫外线胁迫（UV）和高温胁迫（42℃）下均差异表达的circRNA(PhcircRNA1),并利用生物信息学分析其调控的miRNA和靶基因。通过核糖核酸酶R(RNase R)法鉴定其转录的稳定性,并通过实时荧光定量PCR(qRT-PCR)方法分析了PhcircRNA1、靶miRNA(Ph-miR156)和靶mRNA的表达特征。本研究进一步选择GLR3.1(Glutamate Receptor–Like Gene 3.1)靶基因作为研究对象,观察毛竹水培苗根尖生长至1 cm后的circRNA-miRNA-mRNA表达调控趋势。结果表明,在UV胁迫和高温胁迫下,PhcircRNA1和靶mRNA表达量都有明显下降趋势,而miRNA表达量增高。在毛竹根尖细胞中,PhcircRNA1和G...     

Interactions between arbuscular mycorrhizal fungi and fungivorous nematodes on the growth and arsenic uptake of tobacco in arsenic-contaminated soils

The effects of inoculation with two AM fungi (M1, Glomus caledonium; M2, Glomus spp. and Acaulospora spp.) and a fungivorous nematode Aphelenchoides sp. on growth and arsenic (As) uptake of Nicotiana tabacum L. were investigated in soils contaminated with a range of As. The reproduction of Aphelenchoides sp. was triggered by the co-inoculation of AM fungi regardless of AM fungal isolates and As levels. Stimulative effects of Aphelenchoides sp. on the development of mycorrhiza, slightly different between two AM fungi, were found particularly at the lowest As level. Irrespective of mycorrhizal inoculi, increasing soil As level decreased plant growth, but increased plant As uptake. Co-inoculation of AM fungi and Aphelenchoides sp. led plants to achieving further growth and greater As accumulation at the lowest As level. Results showed that the interactions between AM fungi and fungivorous nematodes were important in plant As tolerance and phytoextraction at low level As-polluted soil.     

Lime requirement for agricultural soils: A review of the current and potential methods for routine use

Liming is one of the key agronomic practices to improve crop yields in acid soils because, among other things, it reduces aluminum toxicity and creates favorable conditions for crop growth. For an effective liming program, the methods to determine lime requirement should be as precise as possible. This paper reviews the existing lime requirement methods and discusses the potential of a new one suitable for routine use in the laboratory to test most agricultural soils. The most widely used lime requirement methods can be categorized into four groups: titration, incubation, buffer, and field methods. Other methods such as spectroscopy method or the use of empirical equations have also been adopted. Although some methods are highly reliable, they are not optimal for routine use because they are inconvenient during the laboratory procedures or cannot be validated for all conditions. Based on the linearity between soil pH and the added base in the pH range from 4.5–6.5 in most agricultural soils, a titration-based method on 1:1 soil:0.01 M CaCl₂ slurry of a single sample appears to be a promising candidate for routine use. In further studies, this generally applicable method should be evaluated to provide a better comparison to established methods for lime requirement determination.     

Genotypic differences in the antioxidant and carbon–nitrogen metabolism of acid-tolerant and acid-sensitive rice (Oryzasativa L.) cultivars under acid stress

A pot experiment was conducted to investigate differences in antioxidative defence and carbon–nitrogen metabolism between acid-tolerant (YJSM) and acid-sensitive (YHSM) rice cultivars under acid stress. Acid-tolerant and acid-sensitive rice were planted in both acidic soil (pH 4.21) and normal soil (pH 6.13). Forty-eight days after sowing, rice shoots and roots from four treatments were collected, and the other four replicates were harvested at seed maturity. The results revealed that the grain yield of acid-tolerant YJSM was significantly higher than that of acid-sensitive YHSM under acid stress. The activities of antioxidant enzymes (superoxide dismutase and catalase) and contents of non-enzymatic antioxidants (ascorbate and reduced glutathione) of acid-tolerant YJSM were both higher than those of acid-sensitive YHSM under acid stress. Moreover, the enzyme activities (nitrate reductase, glutamine synthetase, glutamate synthase and glutamate dehydrogenase) and product contents (soluble sugar and soluble protein) of carbon–nitrogen metabolism of acid-tolerant YJSM were higher than those of acid-sensitive YHSM under acid stress. The NO₃^–N and carbon (C) contents in leaves of acid-tolerant YJSM were both significantly higher than those of acid-sensitive YHSM under acid stress. This study suggests that the acid-tolerant rice cultivar has better antioxidative defence and carbon–nitrogen metabolism systems than the acid-sensitive rice cultivar and is more effective in resisting acid stress.